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DOID:3165

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Name:skin benign neoplasm
Namespace:disease_ontology
Xrefs:
links:

MSH:D012878
NCI:C3372
SNOMEDCT_2010_1_31:126488004
SNOMEDCT_2010_1_31:363230005

UMLS_CUI:C0037286
Synonyms: "neoplasm of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:126488004]
"neoplasm of skin by site" EXACT [SNOMEDCT_2005_07_31:363230005]
"skin neoplasm" EXACT [CSP2005:2020-0536]
"tumor of the skin" EXACT [NCI2004_11_17:C3372]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0060121(integumentary system benign neoplasm)



Children


is a:DOID:2438 (dermis tumor)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Mouse (Mus musculus)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3165 (skin benign neoplasm), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_4bf1fba16be651fd4dd742fe244bd26bp1@CU687665
5.42e-195FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_4bf1fba16be651fd4dd742fe244bd26bp@chr11:101742272..101742276, -
5.42e-195FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_4bf1fba16be651fd4dd742fe244bd26bp1@CU687665
5.42e-195FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_4bf1fba16be651fd4dd742fe244bd26bp@chr11:101742272..101742276, -
9.37e-99FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_6ef9ca8d48531370a9d2026cef54e302p@chr18:71197490..71197495, -
9.37e-99FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_6ef9ca8d48531370a9d2026cef54e302p@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_6ef9ca8d48531370a9d2026cef54e302p@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_6ef9ca8d48531370a9d2026cef54e302p@chr5:14034644..14034647, -
9.37e-99FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_6ef9ca8d48531370a9d2026cef54e302p@chr11:81551043..81551054, -
9.37e-99FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_6ef9ca8d48531370a9d2026cef54e302p@chr5:14034644..14034647, -
9.37e-99FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_6ef9ca8d48531370a9d2026cef54e302p@chr11:81551043..81551054, -
9.37e-99FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_6ef9ca8d48531370a9d2026cef54e302p@chr18:71197490..71197495, -
2.55e-98FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr3:45174403..45174415, +
2.55e-98FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr3:45174403..45174415, +
2.55e-98FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr5:23952305..23952310, +
2.55e-98FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_bf4ab47098b498e50cc9b5e9e064c2ebp@chr5:23952305..23952310, +
1.23e-66FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_9a220d8ee112d2b762d0c8ae258a203fp@chr7:119353807..119353812, -
1.23e-66FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_9a220d8ee112d2b762d0c8ae258a203fp1@ENST00000508790
1.23e-66FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_9a220d8ee112d2b762d0c8ae258a203fp1@ENST00000508790
1.23e-66FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_9a220d8ee112d2b762d0c8ae258a203fp@chr7:119353807..119353812, -
2.39e-66FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_a877ca8688064d953a2e661103400226p1@USP26
2.39e-66FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_a877ca8688064d953a2e661103400226p1@USP26
2.39e-66FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_a877ca8688064d953a2e661103400226p@chr8:15939682..15939688, +
2.39e-66FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_a877ca8688064d953a2e661103400226p@chr10:37004821..37004852, -
2.39e-66FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_a877ca8688064d953a2e661103400226p@chr10:37004821..37004852, -
2.39e-66FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_a877ca8688064d953a2e661103400226p@chr8:15939682..15939688, +
4.66e-66FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_f237f0c7309614112a54c988abfe01f2p@chr11:84019133..84019135, -
4.66e-66FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_f237f0c7309614112a54c988abfe01f2p@chr11:84019133..84019135, -
1.46e-50FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_56becd4ed7ee37db67a639543c7c0b3ap@chr5:27723923..27723927, -
1.46e-50FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_56becd4ed7ee37db67a639543c7c0b3ap@chr11:81549961..81549965, -
1.46e-50FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_56becd4ed7ee37db67a639543c7c0b3a-, p@chr5:27723923..27723927
1.46e-50FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_56becd4ed7ee37db67a639543c7c0b3ap@chr11:81549961..81549965, -
2.42e-50FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_39a9d974c88940ec6c3658f0ddb2a7b6p@chrX:124347061..124347063, -
2.42e-50FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_39a9d974c88940ec6c3658f0ddb2a7b6p1@TFDP3
2.42e-50FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_39a9d974c88940ec6c3658f0ddb2a7b6p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_39a9d974c88940ec6c3658f0ddb2a7b6p1@TFDP3
2.42e-50FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_39a9d974c88940ec6c3658f0ddb2a7b6p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_39a9d974c88940ec6c3658f0ddb2a7b6p@chrX:124347061..124347063, -
6.58e-50FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_727b8da432c1b8a3e280db0a13d2ca20p@chr7:12997533..12997536, +
6.58e-50FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_727b8da432c1b8a3e280db0a13d2ca20p@chr7:12997533..12997536, +
6.62e-41FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_3f1d724912fe3f6ba6fc6eaced1fa922p@chr12:127737083..127737103, -
9.91e-41FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_8e14c8408e68a301a22adfd40ad22997p@chr13:87732242..87732246, -
9.91e-41FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_8e14c8408e68a301a22adfd40ad22997p@chr9:118595109..118595124, +
9.91e-41FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_8e14c8408e68a301a22adfd40ad22997p@chr9:118595109..118595124, +
9.91e-41FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_8e14c8408e68a301a22adfd40ad22997p3@ZNF812
9.91e-41FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_8e14c8408e68a301a22adfd40ad22997p3@ZNF812
9.91e-41FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_8e14c8408e68a301a22adfd40ad22997p@chr13:87732242..87732246, -
1.48e-40FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_c78cbcffe92168e815055006b684a4b4p2@SPANXC
1.48e-40FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_c78cbcffe92168e815055006b684a4b4p2@SPANXC
3.3e-40FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_4adf88901f8be9334f232cff0ccf29e4p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_4adf88901f8be9334f232cff0ccf29e4p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_4adf88901f8be9334f232cff0ccf29e4+, p@chr8:76774227..76774234
3.3e-40FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_4adf88901f8be9334f232cff0ccf29e4p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_4adf88901f8be9334f232cff0ccf29e4p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_4adf88901f8be9334f232cff0ccf29e4p@chr18:63273310..63273317, +
3.3e-40FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_4adf88901f8be9334f232cff0ccf29e4p@chr8:76774227..76774234, +
3.3e-40FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_4adf88901f8be9334f232cff0ccf29e4p@chr18:63273310..63273317, +
1.84e-34FFCP PHASE2:Hg19::chr13:87778457..87778464,+#_bfac67330831b82bde8a4712c9ac7ca5p@chr13:87778457..87778464, +
1.84e-34FFCP PHASE1:Hg19::chr13:87778457..87778464,+#_bfac67330831b82bde8a4712c9ac7ca5p@chr13:87778457..87778464, +
1.84e-34FFCP PHASE2:Hg19::chr3:94657049..94657061,+#_bfac67330831b82bde8a4712c9ac7ca5p1@ENST00000462219
1.84e-34FFCP PHASE1:Hg19::chr3:94657049..94657061,+#_bfac67330831b82bde8a4712c9ac7ca5p1@ENST00000462219
3.61e-34FFCP PHASE2:Hg19::chr3:79552183..79552188,+#_5a723e634b6a99416e3afa3a613e493dp@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chrX:148793752..148793763,+#_5a723e634b6a99416e3afa3a613e493dp3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr8:88823985..88824001,-#_5a723e634b6a99416e3afa3a613e493d-, p@chr8:88823985..88824001
3.61e-34FFCP PHASE1:Hg19::chr3:79552183..79552188,+#_5a723e634b6a99416e3afa3a613e493dp@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chr8:88823985..88824001,-#_5a723e634b6a99416e3afa3a613e493dp@chr8:88823985..88824001, -
3.61e-34FFCP PHASE1:Hg19::chrX:148793752..148793763,+#_5a723e634b6a99416e3afa3a613e493dp3@MAGEA11
5.05e-34FFCP PHASE1:Hg19::chr6:66708902..66708907,-#_9b314ec0616b94aa34919c832632485fp@chr6:66708902..66708907, -
5.05e-34FFCP PHASE1:Hg19::chr7:22136603..22136614,+#_9b314ec0616b94aa34919c832632485fp@chr7:22136603..22136614, +
5.05e-34FFCP PHASE2:Hg19::chr6:66708902..66708907,-#_9b314ec0616b94aa34919c832632485fp@chr6:66708902..66708907, -
5.05e-34FFCP PHASE2:Hg19::chr7:22136603..22136614,+#_9b314ec0616b94aa34919c832632485fp@chr7:22136603..22136614, +
7.06e-34FFCP PHASE2:Hg19::chr17:53535935..53535939,+#_aeb0e5a9084d2704783df0556ae3a9f0p@chr17:53535935..53535939, +
7.06e-34FFCP PHASE1:Hg19::chr17:53535935..53535939,+#_aeb0e5a9084d2704783df0556ae3a9f0p@chr17:53535935..53535939, +
7.06e-34FFCP PHASE1:Hg19::chr19:54545833..54545844,-#_aeb0e5a9084d2704783df0556ae3a9f0p@chr19:54545833..54545844, -
7.06e-34FFCP PHASE2:Hg19::chr19:54545833..54545844,-#_aeb0e5a9084d2704783df0556ae3a9f0p@chr19:54545833..54545844, -
9.85e-34FFCP PHASE1:Hg19::chr10:2357481..2357493,+#_0b7cf91b51e34a3f32d774f7213b679bp@chr10:2357481..2357493, +
9.85e-34FFCP PHASE2:Hg19::chr10:2357481..2357493,+#_0b7cf91b51e34a3f32d774f7213b679bp@chr10:2357481..2357493, +
9.99e-30FFCP PHASE1:Hg19::chrX:141290299..141290303,-#_63da32318b6ee4f37c1d3212b59dbf37p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr3:55313580..55313599,-#_63da32318b6ee4f37c1d3212b59dbf37p@chr3:55313580..55313599, -
9.99e-30FFCP PHASE1:Hg19::chr3:55313580..55313599,-#_63da32318b6ee4f37c1d3212b59dbf37p@chr3:55313580..55313599, -
9.99e-30FFCP PHASE2:Hg19::chrX:141290299..141290303,-#_63da32318b6ee4f37c1d3212b59dbf37p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr13:87781278..87781282,+#_63da32318b6ee4f37c1d3212b59dbf37+, p@chr13:87781278..87781282
9.99e-30FFCP PHASE1:Hg19::chr20:26116623..26116634,+#_63da32318b6ee4f37c1d3212b59dbf37+, p@chr20:26116623..26116634
9.99e-30FFCP PHASE2:Hg19::chr20:26116623..26116634,+#_63da32318b6ee4f37c1d3212b59dbf37p@chr20:26116623..26116634, +
9.99e-30FFCP PHASE1:Hg19::chr13:87781278..87781282,+#_63da32318b6ee4f37c1d3212b59dbf37+, p@chr13:87781278..87781282
9.99e-30FFCP PHASE2:Hg19::chr21:17726230..17726234,+#_63da32318b6ee4f37c1d3212b59dbf37p@chr21:17726230..17726234, +
9.99e-30FFCP PHASE1:Hg19::chr21:17726230..17726234,+#_63da32318b6ee4f37c1d3212b59dbf37p@chr21:17726230..17726234, +
1.33e-29FFCP PHASE2:Hg19::chr6:150217260..150217271,-#_03a3338da3ac24d7b92006d8ab0a4387p6@RAET1E
1.33e-29FFCP PHASE2:Hg19::chr1:4729528..4729537,-#_03a3338da3ac24d7b92006d8ab0a4387-, p@chr1:4729528..4729537
1.33e-29FFCP PHASE1:Hg19::chr6:150217260..150217271,-#_03a3338da3ac24d7b92006d8ab0a4387p6@RAET1E
1.33e-29FFCP PHASE1:Hg19::chr1:4729528..4729537,-#_03a3338da3ac24d7b92006d8ab0a4387p@chr1:4729528..4729537, -