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DOID:3493

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Name:signet ring cell adenocarcinoma
Namespace:FANTOM
Definition:"An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, which have signet ring appearance." [url:http://en.wikipedia.org/wiki/Signet_ring_cell_carcinoma]
Xrefs:
links:

MSH:D018279
NCI:C3774
SNOMEDCT_2010_1_31:189701002
SNOMEDCT_2010_1_31:189702009
SNOMEDCT_2010_1_31:87737001

UMLS_CUI:C0206696
Synonyms: "Signet ring carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189702009]
"Signet Ring cell adenocarcinoma" EXACT [NCI2004_11_17:C3774]
"Signet ring cell carcinoma" EXACT [SNOMEDCT_2005_07_31:189701002]
"Signet ring cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:87737001]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:299(adenocarcinoma)



Children


is a:FF:10436-106E4 (signet ring carcinoma cell line:Kato III),FF:10483-107A6 (signet ring carcinoma cell line:NUGC-4)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3493 (signet ring cell adenocarcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr19:10142077..10142083,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr19:10142077..10142083, -
3.29e-195FFCP PHASE1:Hg19::chr19:10142131..10142138,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr19:10142131..10142138, -
3.29e-195FFCP PHASE2:Hg19::chr14:54581722..54581743,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr14:54581722..54581743, -
3.29e-195FFCP PHASE1:Hg19::chr9:85678229..85678237,+#_c71f6cbd59739f32c7d4ed94b680128cp@chr9:85678229..85678237, +
3.29e-195FFCP PHASE2:Hg19::chr19:10142131..10142138,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr19:10142131..10142138, -
3.29e-195FFCP PHASE2:Hg19::chr9:85678229..85678237,+#_c71f6cbd59739f32c7d4ed94b680128cp@chr9:85678229..85678237, +
3.29e-195FFCP PHASE1:Hg19::chr19:10142077..10142083,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr19:10142077..10142083, -
3.29e-195FFCP PHASE1:Hg19::chr14:54581722..54581743,-#_c71f6cbd59739f32c7d4ed94b680128cp@chr14:54581722..54581743, -
4.61e-131FFCP PHASE1:Hg19::chr7:960422..960430,-#_ad40024469c3ccb9699d93fcf65e569bp20@ADAP1
4.61e-131FFCP PHASE1:Hg19::chr19:5846676..5846682,-#_ad40024469c3ccb9699d93fcf65e569bp7@FUT3
4.61e-131FFCP PHASE2:Hg19::chr19:5846676..5846682,-#_ad40024469c3ccb9699d93fcf65e569bp7@FUT3
4.61e-131FFCP PHASE2:Hg19::chr7:960494..960498,-#_ad40024469c3ccb9699d93fcf65e569bp19@ADAP1
4.61e-131FFCP PHASE1:Hg19::chr7:960534..960548,-#_ad40024469c3ccb9699d93fcf65e569bp16@ADAP1
4.61e-131FFCP PHASE2:Hg19::chr19:10142089..10142103,-#_ad40024469c3ccb9699d93fcf65e569bp@chr19:10142089..10142103, -
4.61e-131FFCP PHASE2:Hg19::chr7:960422..960430,-#_ad40024469c3ccb9699d93fcf65e569bp20@ADAP1
4.61e-131FFCP PHASE1:Hg19::chr7:960494..960498,-#_ad40024469c3ccb9699d93fcf65e569bp19@ADAP1
4.61e-131FFCP PHASE2:Hg19::chr7:960534..960548,-#_ad40024469c3ccb9699d93fcf65e569bp16@ADAP1
4.61e-131FFCP PHASE1:Hg19::chr19:10142089..10142103,-#_ad40024469c3ccb9699d93fcf65e569bp@chr19:10142089..10142103, -
8.99e-131FFCP PHASE2:Hg19::chr19:1753387..1753395,-#_ad9ab35b90a15213b28e1188b86bab5c-, p@chr19:1753387..1753395
8.99e-131FFCP PHASE1:Hg19::chr19:1753387..1753395,-#_ad9ab35b90a15213b28e1188b86bab5cp@chr19:1753387..1753395, -
1.75e-130FFCP PHASE2:Hg19::chr7:34890932..34890934,+#_c51c6f2d62d2b7cc2b7d33f232526691p@chr7:34890932..34890934, +
1.75e-130FFCP PHASE1:Hg19::chr7:34890932..34890934,+#_c51c6f2d62d2b7cc2b7d33f232526691p@chr7:34890932..34890934, +
9.38e-99FFCP PHASE2:Hg19::chr3:5884302..5884308,+#_869b512199d2f5fd59f44082f5efce9ep@chr3:5884302..5884308, +
9.38e-99FFCP PHASE1:Hg19::chr3:5884302..5884308,+#_869b512199d2f5fd59f44082f5efce9ep@chr3:5884302..5884308, +
1.55e-98FFCP PHASE2:Hg19::chr15:42186211..42186222,-#_d956ceebe85a24d2504f821c3f76c665p2@SPTBN5
1.55e-98FFCP PHASE1:Hg19::chr17:70417540..70417544,-#_d956ceebe85a24d2504f821c3f76c665-, p@chr17:70417540..70417544
1.55e-98FFCP PHASE1:Hg19::chr10:123310876..123310882,-#_d956ceebe85a24d2504f821c3f76c665p@chr10:123310876..123310882, -
1.55e-98FFCP PHASE2:Hg19::chr3:169101737..169101746,-#_d956ceebe85a24d2504f821c3f76c665p@chr3:169101737..169101746, -
1.55e-98FFCP PHASE1:Hg19::chr20:61278219..61278228,-#_d956ceebe85a24d2504f821c3f76c665p@chr20:61278219..61278228, -
1.55e-98FFCP PHASE2:Hg19::chr17:74459348..74459359,-#_d956ceebe85a24d2504f821c3f76c665p@chr17:74459348..74459359, -
1.55e-98FFCP PHASE2:Hg19::chr17:50828983..50828988,+#_d956ceebe85a24d2504f821c3f76c665p@chr17:50828983..50828988, +
1.55e-98FFCP PHASE2:Hg19::chr15:60662957..60662966,-#_d956ceebe85a24d2504f821c3f76c665p@chr15:60662957..60662966, -
1.55e-98FFCP PHASE1:Hg19::chr10:122521149..122521164,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:122521149..122521164, +
1.55e-98FFCP PHASE2:Hg19::chr22:49239060..49239068,+#_d956ceebe85a24d2504f821c3f76c665p@chr22:49239060..49239068, +
1.55e-98FFCP PHASE2:Hg19::chr20:61278219..61278228,-#_d956ceebe85a24d2504f821c3f76c665p@chr20:61278219..61278228, -
1.55e-98FFCP PHASE2:Hg19::chr5:167545081..167545101,+#_d956ceebe85a24d2504f821c3f76c665p46@ODZ2
1.55e-98FFCP PHASE1:Hg19::chr17:74459348..74459359,-#_d956ceebe85a24d2504f821c3f76c665p@chr17:74459348..74459359, -
1.55e-98FFCP PHASE1:Hg19::chr22:46406849..46406852,+#_d956ceebe85a24d2504f821c3f76c665p@chr22:46406849..46406852, +
1.55e-98FFCP PHASE2:Hg19::chr17:70619903..70619909,+#_d956ceebe85a24d2504f821c3f76c665p@chr17:70619903..70619909, +
1.55e-98FFCP PHASE1:Hg19::chr1:183976829..183976846,-#_d956ceebe85a24d2504f821c3f76c665p@chr1:183976829..183976846, -
1.55e-98FFCP PHASE2:Hg19::chr10:29217811..29217823,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:29217811..29217823, +
1.55e-98FFCP PHASE1:Hg19::chr10:123378808..123378819,-#_d956ceebe85a24d2504f821c3f76c665p@chr10:123378808..123378819, -
1.55e-98FFCP PHASE2:Hg19::chr10:123310876..123310882,-#_d956ceebe85a24d2504f821c3f76c665p@chr10:123310876..123310882, -
1.55e-98FFCP PHASE1:Hg19::chr10:29217811..29217823,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:29217811..29217823, +
1.55e-98FFCP PHASE1:Hg19::chr20:61298207..61298221,-#_d956ceebe85a24d2504f821c3f76c665p2@ENST00000411824
1.55e-98FFCP PHASE2:Hg19::chr3:124209926..124209941,-#_d956ceebe85a24d2504f821c3f76c665p@chr3:124209926..124209941, -
1.55e-98FFCP PHASE1:Hg19::chr10:123256229..123256238,-#_d956ceebe85a24d2504f821c3f76c665p@chr10:123256229..123256238, -
1.55e-98FFCP PHASE2:Hg19::chr10:122521149..122521164,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:122521149..122521164, +
1.55e-98FFCP PHASE2:Hg19::chr20:61298207..61298221,-#_d956ceebe85a24d2504f821c3f76c665p2@ENST00000411824
1.55e-98FFCP PHASE2:Hg19::chr1:183976829..183976846,-#_d956ceebe85a24d2504f821c3f76c665p@chr1:183976829..183976846, -
1.55e-98FFCP PHASE2:Hg19::chr13:74185102..74185107,+#_d956ceebe85a24d2504f821c3f76c665p@chr13:74185102..74185107, +
1.55e-98FFCP PHASE2:Hg19::chr2:9324969..9324972,-#_d956ceebe85a24d2504f821c3f76c665p@chr2:9324969..9324972, -
1.55e-98FFCP PHASE1:Hg19::chr5:496367..496402,-#_d956ceebe85a24d2504f821c3f76c665p@chr5:496367..496402, -
1.55e-98FFCP PHASE2:Hg19::chr1:178009766..178009803,+#_d956ceebe85a24d2504f821c3f76c665p@chr1:178009766..178009803, +
1.55e-98FFCP PHASE2:Hg19::chr21:25744883..25744889,-#_d956ceebe85a24d2504f821c3f76c665p@chr21:25744883..25744889, -
1.55e-98FFCP PHASE1:Hg19::chr1:53890334..53890349,+#_d956ceebe85a24d2504f821c3f76c665p@chr1:53890334..53890349, +
1.55e-98FFCP PHASE2:Hg19::chr15:42186248..42186253,-#_d956ceebe85a24d2504f821c3f76c665p4@SPTBN5
1.55e-98FFCP PHASE1:Hg19::chr10:123313149..123313152,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:123313149..123313152, +
1.55e-98FFCP PHASE2:Hg19::chr10:123256229..123256238,-#_d956ceebe85a24d2504f821c3f76c665-, p@chr10:123256229..123256238
1.55e-98FFCP PHASE1:Hg19::chr13:74185102..74185107,+#_d956ceebe85a24d2504f821c3f76c665p@chr13:74185102..74185107, +
1.55e-98FFCP PHASE1:Hg19::chr17:50828983..50828988,+#_d956ceebe85a24d2504f821c3f76c665p@chr17:50828983..50828988, +
1.55e-98FFCP PHASE2:Hg19::chr12:18400438..18400444,-#_d956ceebe85a24d2504f821c3f76c665p@chr12:18400438..18400444, -
1.55e-98FFCP PHASE2:Hg19::chr3:169101774..169101782,-#_d956ceebe85a24d2504f821c3f76c665p@chr3:169101774..169101782, -
1.55e-98FFCP PHASE2:Hg19::chr5:499786..499794,-#_d956ceebe85a24d2504f821c3f76c665p@chr5:499786..499794, -
1.55e-98FFCP PHASE2:Hg19::chr5:167545123..167545128,+#_d956ceebe85a24d2504f821c3f76c665p60@ODZ2
1.55e-98FFCP PHASE1:Hg19::chr12:18400438..18400444,-#_d956ceebe85a24d2504f821c3f76c665p@chr12:18400438..18400444, -
1.55e-98FFCP PHASE2:Hg19::chr2:37609861..37609884,+#_d956ceebe85a24d2504f821c3f76c665p@chr2:37609861..37609884, +
1.55e-98FFCP PHASE1:Hg19::chr1:183976861..183976878,-#_d956ceebe85a24d2504f821c3f76c665p@chr1:183976861..183976878, -
1.55e-98FFCP PHASE2:Hg19::chr10:29217837..29217846,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:29217837..29217846, +
1.55e-98FFCP PHASE1:Hg19::chr10:123378848..123378857,-#_d956ceebe85a24d2504f821c3f76c665p@chr10:123378848..123378857, -
1.55e-98FFCP PHASE2:Hg19::chr10:123313149..123313152,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:123313149..123313152, +
1.55e-98FFCP PHASE1:Hg19::chr10:29217837..29217846,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:29217837..29217846, +
1.55e-98FFCP PHASE1:Hg19::chrX:96374896..96374901,+#_d956ceebe85a24d2504f821c3f76c665p@chrX:96374896..96374901, +
1.55e-98FFCP PHASE1:Hg19::chr20:61298260..61298263,-#_d956ceebe85a24d2504f821c3f76c665p3@ENST00000411824
1.55e-98FFCP PHASE2:Hg19::chr2:28762016..28762055,-#_d956ceebe85a24d2504f821c3f76c665p@chr2:28762016..28762055, -
1.55e-98FFCP PHASE2:Hg19::chr17:74459187..74459193,-#_d956ceebe85a24d2504f821c3f76c665p@chr17:74459187..74459193, -
1.55e-98FFCP PHASE2:Hg19::chr20:61298260..61298263,-#_d956ceebe85a24d2504f821c3f76c665p3@ENST00000411824
1.55e-98FFCP PHASE1:Hg19::chr15:42186200..42186205,-#_d956ceebe85a24d2504f821c3f76c665p3@SPTBN5
1.55e-98FFCP PHASE1:Hg19::chr10:122520831..122520842,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:122520831..122520842, +
1.55e-98FFCP PHASE2:Hg19::chrX:96374896..96374901,+#_d956ceebe85a24d2504f821c3f76c665p@chrX:96374896..96374901, +
1.55e-98FFCP PHASE2:Hg19::chr16:85016361..85016372,+#_d956ceebe85a24d2504f821c3f76c665p@chr16:85016361..85016372, +
1.55e-98FFCP PHASE2:Hg19::chr1:183976861..183976878,-#_d956ceebe85a24d2504f821c3f76c665p@chr1:183976861..183976878, -
1.55e-98FFCP PHASE1:Hg19::chr3:169101687..169101694,-#_d956ceebe85a24d2504f821c3f76c665p@chr3:169101687..169101694, -
1.55e-98FFCP PHASE1:Hg19::chr2:28762016..28762055,-#_d956ceebe85a24d2504f821c3f76c665p@chr2:28762016..28762055, -
1.55e-98FFCP PHASE1:Hg19::chr17:56492937..56492946,-#_d956ceebe85a24d2504f821c3f76c665p11@RNF43
1.55e-98FFCP PHASE1:Hg19::chr17:74459187..74459193,-#_d956ceebe85a24d2504f821c3f76c665p@chr17:74459187..74459193, -
1.55e-98FFCP PHASE2:Hg19::chr22:46406849..46406852,+#_d956ceebe85a24d2504f821c3f76c665p@chr22:46406849..46406852, +
1.55e-98FFCP PHASE1:Hg19::chr19:10142279..10142292,-#_d956ceebe85a24d2504f821c3f76c665p@chr19:10142279..10142292, -
1.55e-98FFCP PHASE1:Hg19::chr20:61299085..61299091,+#_d956ceebe85a24d2504f821c3f76c665p24@SLCO4A1
1.55e-98FFCP PHASE2:Hg19::chr17:56492937..56492946,-#_d956ceebe85a24d2504f821c3f76c665p11@RNF43
1.55e-98FFCP PHASE2:Hg19::chr1:188011911..188011936,+#_d956ceebe85a24d2504f821c3f76c665p@chr1:188011911..188011936, +
1.55e-98FFCP PHASE2:Hg19::chr17:70417540..70417544,-#_d956ceebe85a24d2504f821c3f76c665p@chr17:70417540..70417544, -
1.55e-98FFCP PHASE1:Hg19::chr2:121082746..121082759,-#_d956ceebe85a24d2504f821c3f76c665p@chr2:121082746..121082759, -
1.55e-98FFCP PHASE1:Hg19::chr5:167545081..167545101,+#_d956ceebe85a24d2504f821c3f76c665p46@ODZ2
1.55e-98FFCP PHASE2:Hg19::chr20:61299085..61299091,+#_d956ceebe85a24d2504f821c3f76c665p24@SLCO4A1
1.55e-98FFCP PHASE2:Hg19::chr17:51139124..51139129,+#_d956ceebe85a24d2504f821c3f76c665p@chr17:51139124..51139129, +
1.55e-98FFCP PHASE1:Hg19::chr6:110282878..110282882,-#_d956ceebe85a24d2504f821c3f76c665p@chr6:110282878..110282882, -
1.55e-98FFCP PHASE1:Hg19::chr10:122910650..122910656,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:122910650..122910656, +
1.55e-98FFCP PHASE2:Hg19::chr10:122520831..122520842,+#_d956ceebe85a24d2504f821c3f76c665p@chr10:122520831..122520842, +
1.55e-98FFCP PHASE2:Hg19::chr5:167545165..167545170,+#_d956ceebe85a24d2504f821c3f76c665p61@ODZ2