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UBERON:0000045

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Name:ganglion
Namespace:FANTOM
Definition:"A biological tissue mass, most commonly a mass of nerve cell bodies." [Wikipedia:Ganglion]
Xrefs:
links:

AAO:0010426
AEO:0000135
BTO:0000497
EFO:0000899
EHDAA2:0003135
EHDAA:2897
EHDAA:4662
EHDAA:5621
EHDAA:918
EV:0100372
FBbt:00005137
FMA:5884
MA:0002406
MAT:0000207
MAT:0000343
MESH:A.08.340
MIAA:0000207
MIAA:0000343
ncithesaurus:Ganglion
NIF_GrossAnatomy:nlx_anat_100302
TAO:0000190
TGMA:0001016
VHOG:0000156
WBbt:0005189
XAO:0000209

ZFA:0000190
Synonyms: "ganglia" RELATED []
"neural ganglion" RELATED [BTO:0000497]
Comments:TODO - check vert vs invert. Other species: Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system. // Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com).
Alt_id: UBERON:FBbt_00005137-FMA_5884-FMA_5888-MA_0000232-MA_0002406-MIAA_0000162-MIAA_0000207-MIAA_0000343-WBbt_0005189-XAO_0000209-XAO_0000210-ZFA_0000190-ZFA_0000200
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003714(neural tissue)
disjoint_from:UBERON:0002420(basal ganglion)
develops_from:UBERON:0003869(presumptive ganglion)
part_of:UBERON:0001016(nervous system)



Children

is a:UBERON:0001714 (cranial ganglion),UBERON:0003338 (ganglion of peripheral nervous system)
part of:FF:0000186 (sympathetic ganglia)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000045 (ganglion), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.