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UBERON:0001982

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Name:capillary
Namespace:FANTOM
Definition:"Microvessel of the blood circulation system lined with vascular endothelial cells[ZFA]. Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary]
Xrefs:
links:

AAO:0010252
BTO:0002045
EFO:0001906
EMAPA:28039
EMAPA:28075
EV:0100035
FMA:63194
[1]
MA:0000065
MESH:A.07.231.432.410
ncithesaurus:Capillary
NIF_GrossAnatomy:nlx_anat_090902
OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA
TAO:0005250
VHOG:0001253
XAO:0000116

ZFA:0005250
Synonyms: "blood capillary" EXACT []
"capillary vessel" EXACT []
Alt_id: UBERON:FMA_63194-MA_0000065-XAO_0000116
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0001981(blood vessel),UBERON:0010523(microcirculatory vessel)



Children

is a:UBERON:2005260 (fenestrated capillary)
part of:UBERON:0001915 (endothelium of capillary)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001982 (capillary), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.06e-99FFCP PHASE2:Hg19::chr15:65935283..65935297,+#_d93d5de66e02baf3806c3c0d25496b22p11@SLC24A1
4.06e-99FFCP PHASE1:Hg19::chr15:65935283..65935297,+#_d93d5de66e02baf3806c3c0d25496b22p11@SLC24A1
6.24e-88FFCP PHASE1:Hg19::chr12:6161828..6161837,-#_2b959f29f41ca4f86a2c6786fe63f830p@chr12:6161828..6161837, -
6.24e-88FFCP PHASE2:Hg19::chr12:6161828..6161837,-#_2b959f29f41ca4f86a2c6786fe63f830p@chr12:6161828..6161837, -
9.74e-88FFCP PHASE1:Hg19::chr13:102379103..102379108,-#_a3688a3eebe91ab4df10fdb58fee607ap@chr13:102379103..102379108, -
9.74e-88FFCP PHASE2:Hg19::chr13:102379103..102379108,-#_a3688a3eebe91ab4df10fdb58fee607ap@chr13:102379103..102379108, -
2.28e-85FFCP PHASE2:Hg19::chr1:214453986..214454002,+#_53e20c5ed156055a65f5c1b3fddd3388p10@SMYD2
2.28e-85FFCP PHASE1:Hg19::chr1:214453986..214454002,+#_53e20c5ed156055a65f5c1b3fddd3388p10@SMYD2
3.04e-85FFCP PHASE1:Hg19::chr11:108743594..108743616,+#_550432dbee7b0a2748828d32a31b630cp@chr11:108743594..108743616, +
3.04e-85FFCP PHASE2:Hg19::chr11:108743594..108743616,+#_550432dbee7b0a2748828d32a31b630cp@chr11:108743594..108743616, +
7.21e-85FFCP PHASE1:Hg19::chr1:94526344..94526353,-#_492aa60256e7f084da9cabfd45c3cd07p4@ABCA4
7.21e-85FFCP PHASE2:Hg19::chr1:94526344..94526353,-#_492aa60256e7f084da9cabfd45c3cd07p4@ABCA4
1.28e-84FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_fbbb1725c99be3f0a7cc23986742e202p2@ENST00000428006
1.28e-84FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_fbbb1725c99be3f0a7cc23986742e202p2@ENST00000428006
2.27e-84FFCP PHASE1:Hg19::chr18:54339823..54339834,+#_c332eec2016dfae6bfbe91a3783c5124p8@WDR7
2.27e-84FFCP PHASE2:Hg19::chr18:54339823..54339834,+#_c332eec2016dfae6bfbe91a3783c5124p8@WDR7
3.03e-84FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_0e298fea96f04faccc7d15d9a93d3690p25@CD36
3.03e-84FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_0e298fea96f04faccc7d15d9a93d3690p25@CD36
4.55e-74FFCP PHASE2:Hg19::chr4:38057520..38057536,-#_979c4f5863a5b8988025260f3672f664p@chr4:38057520..38057536, -
4.55e-74FFCP PHASE1:Hg19::chr4:38057520..38057536,-#_979c4f5863a5b8988025260f3672f664p@chr4:38057520..38057536, -
5.01e-67FFCP PHASE2:Hg19::chr20:62679771..62679782,-#_b93cab3baa681b2da70d144f67140ee3p4@SOX18
5.01e-67FFCP PHASE1:Hg19::chr20:62679771..62679782,-#_b93cab3baa681b2da70d144f67140ee3p4@SOX18
2.39e-66FFCP PHASE1:Hg19::chr17:54893310..54893315,-#_8a54abe239619e4fc82fdcc30b22d2a3p15@C17orf67
2.39e-66FFCP PHASE2:Hg19::chr17:54893310..54893315,-#_8a54abe239619e4fc82fdcc30b22d2a3p15@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr2:122514086..122514090,+#_8a54abe239619e4fc82fdcc30b22d2a3p5@TSN
2.39e-66FFCP PHASE2:Hg19::chr2:122514086..122514090,+#_8a54abe239619e4fc82fdcc30b22d2a3p5@TSN
1.33e-60FFCP PHASE1:Hg19::chr3:30560333..30560348,+#_78aeeca4df67f4a8336469e48dc4c9f2p@chr3:30560333..30560348, +
1.33e-60FFCP PHASE2:Hg19::chr3:30560333..30560348,+#_78aeeca4df67f4a8336469e48dc4c9f2p@chr3:30560333..30560348, +
1.51e-54FFCP PHASE2:Hg19::chr2:56149828..56149839,-#_0f739b94c634acba84d6c558467c23c4p17@EFEMP1
1.51e-54FFCP PHASE1:Hg19::chr2:56149828..56149839,-#_0f739b94c634acba84d6c558467c23c4p17@EFEMP1
2.87e-53FFCP PHASE2:Hg19::chr5:106837881..106837888,-#_19a1ff1697eca95f33a837cdb0f96cb6p@chr5:106837881..106837888, -
2.87e-53FFCP PHASE1:Hg19::chr5:106837881..106837888,-#_19a1ff1697eca95f33a837cdb0f96cb6p@chr5:106837881..106837888, -
2.87e-53FFCP PHASE2:Hg19::chr2:73311401..73311431,-#_19a1ff1697eca95f33a837cdb0f96cb6p17@RAB11FIP5
2.87e-53FFCP PHASE1:Hg19::chr2:73311401..73311431,-#_19a1ff1697eca95f33a837cdb0f96cb6p17@RAB11FIP5
3.75e-53FFCP PHASE1:Hg19::chr15:74935416..74935419,-#_f6e572a40e4fd928d8c18c2209dd82cdp@chr15:74935416..74935419, -
3.75e-53FFCP PHASE2:Hg19::chr15:74935416..74935419,-#_f6e572a40e4fd928d8c18c2209dd82cdp@chr15:74935416..74935419, -
2.64e-50FFCP PHASE2:Hg19::chr12:4690021..4690046,+#_da374a8617e14f1c6182e5bd93187393p@chr12:4690021..4690046, +
2.64e-50FFCP PHASE1:Hg19::chr12:4690021..4690046,+#_da374a8617e14f1c6182e5bd93187393p@chr12:4690021..4690046, +
4.38e-50FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_4b4d73886be636c69f56f1bce01ae043p@chr17:28534912..28534942, -
4.38e-50FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_4b4d73886be636c69f56f1bce01ae043p@chr17:28534912..28534942, -
1.03e-46FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_a03c75e7afc41bfa3964544ca8dba60ap@chr4:189881560..189881604, -
1.03e-46FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_a03c75e7afc41bfa3964544ca8dba60ap@chr4:189881560..189881604, -
1.65e-46FFCP PHASE2:Hg19::chr22:19748407..19748412,+#_24d848ff131c1904443321abc460b453p5@TBX1
1.65e-46FFCP PHASE1:Hg19::chr22:19748407..19748412,+#_24d848ff131c1904443321abc460b453p5@TBX1
5.0e-45FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_c5044484dc36e1a5a12f5a89806a5514p3@LOC441179
5.0e-45FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_c5044484dc36e1a5a12f5a89806a5514p3@LOC441179
4.49e-44FFCP PHASE2:Hg19::chr15:65935213..65935234,+#_1efa79b5d4b3a3d53c508410c0a8c122p8@SLC24A1
4.49e-44FFCP PHASE1:Hg19::chr15:65935213..65935234,+#_1efa79b5d4b3a3d53c508410c0a8c122p8@SLC24A1
1.43e-43FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_c9c58183d20612cd4d814092976253dcp4@PCDH12
1.43e-43FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_c9c58183d20612cd4d814092976253dcp4@PCDH12
1.31e-40FFCP PHASE2:Hg19::chr22:19748074..19748094,-#_ab51308745128867f29723615941586cp@chr22:19748074..19748094, -
1.31e-40FFCP PHASE1:Hg19::chr22:19748074..19748094,-#_ab51308745128867f29723615941586cp@chr22:19748074..19748094, -
1.23e-38FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_858d89fa9c19bbea780cd1f4749b7a11p17@RASGRP3
1.23e-38FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_858d89fa9c19bbea780cd1f4749b7a11p17@RASGRP3
2.18e-38FFCP PHASE1:Hg19::chr6:49533964..49533975,+#_ff4f784df9ef6c821d1812c619f566f6p@chr6:49533964..49533975, +
2.18e-38FFCP PHASE2:Hg19::chr6:49533964..49533975,+#_ff4f784df9ef6c821d1812c619f566f6p@chr6:49533964..49533975, +
3.19e-38FFCP PHASE2:Hg19::chr6:46922535..46922542,-#_054693851c18fcde0b19ea8b2b3de3afp9@GPR116
3.19e-38FFCP PHASE1:Hg19::chr6:46922535..46922542,-#_054693851c18fcde0b19ea8b2b3de3afp9@GPR116
2.08e-36FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_2535f10b6cce75910875221f75287ec8p@chr10:3477893..3477912, -
2.08e-36FFCP PHASE1:Hg19::chr6:84849274..84849294,+#_2535f10b6cce75910875221f75287ec8p@chr6:84849274..84849294, +
2.08e-36FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_2535f10b6cce75910875221f75287ec8p@chr10:3477893..3477912, -
2.08e-36FFCP PHASE2:Hg19::chr6:84849274..84849294,+#_2535f10b6cce75910875221f75287ec8p@chr6:84849274..84849294, +
3.94e-34FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_592bca6f814299e7a2a6d3569e55d615p@chr3:30560368..30560379, +
3.94e-34FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_592bca6f814299e7a2a6d3569e55d615p@chr3:30560368..30560379, +
5.51e-34FFCP PHASE1:Hg19::chr4:144507245..144507268,-#_068aca454215d9348a3a0962704d0799p@chr4:144507245..144507268, -
5.51e-34FFCP PHASE2:Hg19::chr4:144507245..144507268,-#_068aca454215d9348a3a0962704d0799p@chr4:144507245..144507268, -
5.96e-34FFCP PHASE1:Hg19::chr10:4823046..4823055,-#_630d283ad6962905d9968064e4077dbep@chr10:4823046..4823055, -
5.96e-34FFCP PHASE2:Hg19::chr10:4823046..4823055,-#_630d283ad6962905d9968064e4077dbep@chr10:4823046..4823055, -
5.96e-34FFCP PHASE2:Hg19::chr15:65398647..65398656,-#_630d283ad6962905d9968064e4077dbep3@UBAP1L
5.96e-34FFCP PHASE1:Hg19::chr15:65398647..65398656,-#_630d283ad6962905d9968064e4077dbep3@UBAP1L
6.51e-34FFCP PHASE2:Hg19::chr1:47183850..47183861,-#_db9661da22ac980db13af07d3b5538b2p12@KIAA0494
6.51e-34FFCP PHASE1:Hg19::chr1:47183850..47183861,-#_db9661da22ac980db13af07d3b5538b2p12@KIAA0494
6.76e-34FFCP PHASE2:Hg19::chr1:228290095..228290116,-#_e7b888f071000069b9ed92d725d7aa53p@chr1:228290095..228290116, -
6.76e-34FFCP PHASE1:Hg19::chr1:228290095..228290116,-#_e7b888f071000069b9ed92d725d7aa53p@chr1:228290095..228290116, -
7.7e-34FFCP PHASE2:Hg19::chr17:65990349..65990362,-#_ec3cc45754639cbac5922b75fc22c669p@chr17:65990349..65990362, -
7.7e-34FFCP PHASE2:Hg19::chr22:19746577..19746611,+#_ec3cc45754639cbac5922b75fc22c669p@chr22:19746577..19746611, +
7.7e-34FFCP PHASE2:Hg19::chr19:47231566..47231577,-#_ec3cc45754639cbac5922b75fc22c669p@chr19:47231566..47231577, -
7.7e-34FFCP PHASE1:Hg19::chr22:19746577..19746611,+#_ec3cc45754639cbac5922b75fc22c669p@chr22:19746577..19746611, +
7.7e-34FFCP PHASE1:Hg19::chr19:47231566..47231577,-#_ec3cc45754639cbac5922b75fc22c669p@chr19:47231566..47231577, -
7.7e-34FFCP PHASE1:Hg19::chr17:65990349..65990362,-#_ec3cc45754639cbac5922b75fc22c669p@chr17:65990349..65990362, -
8.46e-34FFCP PHASE2:Hg19::chr4:183399811..183399829,+#_efa1c0e1406371e9da79f78c08d6df60p@chr4:183399811..183399829, +
8.46e-34FFCP PHASE1:Hg19::chr4:183399811..183399829,+#_efa1c0e1406371e9da79f78c08d6df60p@chr4:183399811..183399829, +
9.1e-34FFCP PHASE2:Hg19::chr7:107332367..107332379,+#_20ed3bbe53fd25306e51f03513f68c6ep3@SLC26A4
9.1e-34FFCP PHASE1:Hg19::chr7:107332367..107332379,+#_20ed3bbe53fd25306e51f03513f68c6ep3@SLC26A4
2.58e-33FFCP PHASE1:Hg19::chr2:71730376..71730412,+#_a85ca138a023be5cb70079350a616f18p@chr2:71730376..71730412, +
2.58e-33FFCP PHASE2:Hg19::chr2:71730376..71730412,+#_a85ca138a023be5cb70079350a616f18p@chr2:71730376..71730412, +
6.66e-33FFCP PHASE1:Hg19::chr9:139553916..139553927,+#_7fe594ec69492002e68eec6d71107279p@chr9:139553916..139553927, +
6.66e-33FFCP PHASE2:Hg19::chr9:139553916..139553927,+#_7fe594ec69492002e68eec6d71107279p@chr9:139553916..139553927, +
2.17e-32FFCP PHASE1:Hg19::chr10:3466752..3466759,-#_fd4ccdee251600f95d5df587406646dep@chr10:3466752..3466759, -
2.17e-32FFCP PHASE2:Hg19::chr10:3466752..3466759,-#_fd4ccdee251600f95d5df587406646dep@chr10:3466752..3466759, -
2.68e-32FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_def83c1feffc419589acb2180ed17c6fp@chr12:96841308..96841312, +
2.68e-32FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_def83c1feffc419589acb2180ed17c6fp@chr12:96841308..96841312, +
2.66e-31FFCP PHASE2:Hg19::chr12:120142354..120142372,-#_609d611eee1c184811f45719e5e1dbe2p@chr12:120142354..120142372, -
2.66e-31FFCP PHASE1:Hg19::chr12:120142354..120142372,-#_609d611eee1c184811f45719e5e1dbe2p@chr12:120142354..120142372, -
6.66e-31FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_0eb0d0b4c8350a06e14289753fbf1d23p@chr1:61415107..61415136, -
6.66e-31FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_0eb0d0b4c8350a06e14289753fbf1d23p@chr1:61415107..61415136, -
9.03e-31FFCP PHASE1:Hg19::chr15:89736241..89736275,+#_15ab8ba1ba2344041da671d0a02d5352p@chr15:89736241..89736275, +
9.03e-31FFCP PHASE2:Hg19::chr15:89736241..89736275,+#_15ab8ba1ba2344041da671d0a02d5352p@chr15:89736241..89736275, +
4.84e-30FFCP PHASE2:Hg19::chr10:4822908..4822927,-#_97e9db1aaa43b0342b746186222ec5f6p@chr10:4822908..4822927, -
4.84e-30FFCP PHASE1:Hg19::chr10:4822908..4822927,-#_97e9db1aaa43b0342b746186222ec5f6p@chr10:4822908..4822927, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.