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UBERON:0002165

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Name:endocardium
Namespace:FANTOM
Definition:"The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber[FMA]." [FMA:7280, Wikipedia:Endocardium]
Xrefs:
links:

AAO:0010408
BTO:0000387
EFO:0000821
EHDAA2:0004153
EV:0100021
FMA:7280
GAID:550
galen:Endocardium
[ Gray493.png Gray493.png]
[ 200px-Gray493.png 200px-Gray493.png]
MA:0000076
MAT:0000455
MESH:A.07.541.207
ncithesaurus:Endocardium
OpenCyc:Mx4rsWA75K1cEduAAADggVaqvw
SCTID:362013006
TAO:0001320
VHOG:0000084
XAO:0000066

ZFA:0001320
Synonyms: "heart endocardium" EXACT []
Comments:fixed in GO to reflect FMA. See email to David/Varsha June 18 2010
Alt_id: UBERON:FMA_7280-XAO_0000066-ZFA_0001320
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002523(tunica intima),UBERON:0005983(heart layer)
develops_from:UBERON:0003084(heart primordium),UBERON:0007280(presumptive endocardium)
part_of:UBERON:0000948(heart)



Children

part of:UBERON:0002062 (endocardial cushion)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002165 (endocardium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.41e-147FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_f61ad24957416ad5c33b19055cbe4b93p@chr7:25815812..25815822, -
5.41e-147FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_f61ad24957416ad5c33b19055cbe4b93p@chr7:25815812..25815822, -
8.98e-131FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_c7c88a37bb4c4e2d38b4bc5a2ec82b69p@chr12:3373147..3373149, -
8.98e-131FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_c7c88a37bb4c4e2d38b4bc5a2ec82b69p@chr12:3373147..3373149, -
7.78e-118FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_c9a360ad2e81a1d455ac2f1d9c7c382dp@chr1:20355975..20355980, -
7.78e-118FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_c9a360ad2e81a1d455ac2f1d9c7c382dp@chr1:20355975..20355980, -
5.69e-99FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_9c89d50734dfb153f62a49d4349742dfp@chr1:237331032..237331036, +
5.69e-99FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_9c89d50734dfb153f62a49d4349742dfp@chr1:237331032..237331036, +
1.52e-87FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_012aa305c9db55ee84d4f89ecffc7c98p@chr2:18116344..18116353, +
1.52e-87FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_012aa305c9db55ee84d4f89ecffc7c98p@chr6:6739548..6739577, -
1.52e-87FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_012aa305c9db55ee84d4f89ecffc7c98p@chr2:18116344..18116353, +
1.52e-87FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_012aa305c9db55ee84d4f89ecffc7c98p@chr6:6739548..6739577, -
1.52e-87FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_012aa305c9db55ee84d4f89ecffc7c98p9@NPPA
1.52e-87FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_012aa305c9db55ee84d4f89ecffc7c98p9@NPPA
7.21e-85FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_4745321fed781b6bf0ad3dd3ae77a41ep@chrX:112324334..112324339, -
7.21e-85FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_4745321fed781b6bf0ad3dd3ae77a41ep@chrX:112324334..112324339, -
1.71e-84FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_0b2c3284125264ababe4f5e498970da6p11@SLC4A3
1.71e-84FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_0b2c3284125264ababe4f5e498970da6p11@SLC4A3
2.27e-84FFCP PHASE1:Hg19::chr2:179533457..179533461,-#_a632be7d87216933416297ca21150b67p@chr2:179533457..179533461, -
2.27e-84FFCP PHASE2:Hg19::chr2:179533457..179533461,-#_a632be7d87216933416297ca21150b67p@chr2:179533457..179533461, -
3.03e-84FFCP PHASE1:Hg19::chr2:179398102..179398109,-#_ef36abedf210c436057d9fd2eb8d54efp@chr2:179398102..179398109, -
3.03e-84FFCP PHASE2:Hg19::chr2:179398102..179398109,-#_ef36abedf210c436057d9fd2eb8d54efp@chr2:179398102..179398109, -
7.81e-75FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_20bea104bd41e6ba48905e4f72c8eb7cp@chr5:123739302..123739319, -
7.81e-75FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_20bea104bd41e6ba48905e4f72c8eb7cp@chr5:123739302..123739319, -
1.01e-74FFCP PHASE1:Hg19::chr18:64271475..64271484,-#_f0b82ec19988fed25473bb8d8642cbfdp6@CDH19
1.01e-74FFCP PHASE2:Hg19::chr18:64271475..64271484,-#_f0b82ec19988fed25473bb8d8642cbfdp6@CDH19
1.29e-74FFCP PHASE1:Hg19::chr7:35286774..35286778,-#_1bc8cef6a014d443f2c705b7ef26e72cp@chr7:35286774..35286778, -
1.29e-74FFCP PHASE2:Hg19::chr7:35286774..35286778,-#_1bc8cef6a014d443f2c705b7ef26e72cp@chr7:35286774..35286778, -
1.66e-74FFCP PHASE1:Hg19::chr6:129355052..129355056,+#_73e0a379cc6886220ae179733e6cbf92p@chr6:129355052..129355056, +
1.66e-74FFCP PHASE2:Hg19::chr6:129355052..129355056,+#_73e0a379cc6886220ae179733e6cbf92p@chr6:129355052..129355056, +
2.75e-74FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_db447ee5bedefe899340093f494e3a6fp@chr3:16940540..16940554, +
2.75e-74FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_db447ee5bedefe899340093f494e3a6fp@chr3:16940540..16940554, +
3.54e-74FFCP PHASE1:Hg19::chr19:55661803..55661807,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr19:55661803..55661807, -
3.54e-74FFCP PHASE2:Hg19::chr20:33565465..33565475,+#_00a8a94fcdfe33d311e007e4a6bcde18p9@MYH7B
3.54e-74FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr1:201328779..201328797, -
3.54e-74FFCP PHASE1:Hg19::chr20:33565465..33565475,+#_00a8a94fcdfe33d311e007e4a6bcde18p9@MYH7B
3.54e-74FFCP PHASE2:Hg19::chr19:55661803..55661807,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr19:55661803..55661807, -
3.54e-74FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr3:131523446..131523459, -
3.54e-74FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr3:131523446..131523459, -
3.54e-74FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_00a8a94fcdfe33d311e007e4a6bcde18p@chr1:201328779..201328797, -
5.84e-74FFCP PHASE2:Hg19::chr6:36812121..36812130,-#_45e51361054f87d20967ec9098bbf208p@chr6:36812121..36812130, -
5.84e-74FFCP PHASE1:Hg19::chr6:36812121..36812130,-#_45e51361054f87d20967ec9098bbf208p@chr6:36812121..36812130, -
7.51e-74FFCP PHASE1:Hg19::chr14:105939326..105939337,+#_c0d879369b5ba03cef510d2d494b3442p16@CRIP2
7.51e-74FFCP PHASE2:Hg19::chr14:105939326..105939337,+#_c0d879369b5ba03cef510d2d494b3442p16@CRIP2
9.64e-74FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_91cae0d8e8af59cd728d99086e9a9e4fp@chr1:206838422..206838456, +
9.64e-74FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_91cae0d8e8af59cd728d99086e9a9e4fp@chr1:206838422..206838456, +
1.24e-73FFCP PHASE2:Hg19::chr1:231983543..231983554,-#_45583beb3bb8367a25279867827e7e7d-, p@chr1:231983543..231983554
1.24e-73FFCP PHASE1:Hg19::chr1:231983543..231983554,-#_45583beb3bb8367a25279867827e7e7dp@chr1:231983543..231983554, -
1.54e-66FFCP PHASE1:Hg19::chr1:201328328..201328343,-#_c114849f01865f65f74b1395f2b70c48p@chr1:201328328..201328343, -
1.54e-66FFCP PHASE2:Hg19::chr1:201328328..201328343,-#_c114849f01865f65f74b1395f2b70c48p@chr1:201328328..201328343, -
1.71e-66FFCP PHASE1:Hg19::chr1:237214095..237214115,+#_7023d580ec9407182deaaeed7470411bp@chr1:237214095..237214115, +
1.71e-66FFCP PHASE2:Hg19::chr1:237214095..237214115,+#_7023d580ec9407182deaaeed7470411bp@chr1:237214095..237214115, +
1.71e-66FFCP PHASE2:Hg19::chr11:47367243..47367257,-#_7023d580ec9407182deaaeed7470411bp@chr11:47367243..47367257, -
1.71e-66FFCP PHASE1:Hg19::chr11:47367243..47367257,-#_7023d580ec9407182deaaeed7470411bp@chr11:47367243..47367257, -
2.39e-66FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_143f5505e254bb49505ca32a80b26d3dp@chr15:86272097..86272099, +
2.39e-66FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_143f5505e254bb49505ca32a80b26d3dp@chr5:99390735..99390743, -
2.39e-66FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_143f5505e254bb49505ca32a80b26d3dp@chr5:99390735..99390743, -
2.39e-66FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_143f5505e254bb49505ca32a80b26d3d-, p@chr10:92678409..92678410
2.39e-66FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_143f5505e254bb49505ca32a80b26d3dp@chr10:92678409..92678410, -
2.39e-66FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_143f5505e254bb49505ca32a80b26d3dp@chr15:86272097..86272099, +
2.4e-66FFCP PHASE1:Hg19::chr2:159976509..159976519,+#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr2:159976509..159976519, +
2.4e-66FFCP PHASE1:Hg19::chr1:237996521..237996532,+#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr1:237996521..237996532, +
2.4e-66FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr12:4735761..4735787, -
2.4e-66FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr12:114886577..114886589, -
2.4e-66FFCP PHASE2:Hg19::chr2:159976509..159976519,+#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr2:159976509..159976519, +
2.4e-66FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr12:4735761..4735787, -
2.4e-66FFCP PHASE2:Hg19::chr1:237996521..237996532,+#_4ef03d95d2ff29e0a365aacc21bf6ce4p@chr1:237996521..237996532, +
2.4e-66FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_4ef03d95d2ff29e0a365aacc21bf6ce4-, p@chr12:114886577..114886589
2.41e-66FFCP PHASE1:Hg19::chr2:40480968..40480972,-#_550a3e0f4d59bd8bf8a8e4753d84075ap@chr2:40480968..40480972, -
2.41e-66FFCP PHASE2:Hg19::chr1:237207955..237207959,+#_550a3e0f4d59bd8bf8a8e4753d84075ap@chr1:237207955..237207959, +
2.41e-66FFCP PHASE2:Hg19::chr2:40480968..40480972,-#_550a3e0f4d59bd8bf8a8e4753d84075ap@chr2:40480968..40480972, -
2.41e-66FFCP PHASE1:Hg19::chr1:237207955..237207959,+#_550a3e0f4d59bd8bf8a8e4753d84075ap@chr1:237207955..237207959, +
3.01e-66FFCP PHASE2:Hg19::chr4:62999501..62999517,+#_a0c877e77078cb991da5b2aa92ad2530p@chr4:62999501..62999517, +
3.01e-66FFCP PHASE1:Hg19::chr4:62999501..62999517,+#_a0c877e77078cb991da5b2aa92ad2530p@chr4:62999501..62999517, +
3.35e-66FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr1:11905830..11905839, -
3.35e-66FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_6515379f42ac9a7a3613dec6c0a3925fp2@MYL7
3.35e-66FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr1:11905830..11905839, -
3.35e-66FFCP PHASE2:Hg19::chr9:38650254..38650266,+#_6515379f42ac9a7a3613dec6c0a3925fp@chr9:38650254..38650266, +
3.35e-66FFCP PHASE1:Hg19::chr9:38650254..38650266,+#_6515379f42ac9a7a3613dec6c0a3925fp@chr9:38650254..38650266, +
3.35e-66FFCP PHASE1:Hg19::chr7:35253487..35253489,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr7:35253487..35253489, -
3.35e-66FFCP PHASE1:Hg19::chr5:65736120..65736128,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr5:65736120..65736128, -
3.35e-66FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_6515379f42ac9a7a3613dec6c0a3925fp2@MYL7
3.35e-66FFCP PHASE2:Hg19::chr5:65736120..65736128,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr5:65736120..65736128, -
3.35e-66FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr7:44178491..44178498, -
3.35e-66FFCP PHASE2:Hg19::chr7:35253487..35253489,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr7:35253487..35253489, -
3.35e-66FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_6515379f42ac9a7a3613dec6c0a3925fp@chr7:44178491..44178498, -
4.68e-66FFCP PHASE1:Hg19::chr10:112524543..112524547,+#_8b4c4ab381a444b7d40f04f52bd9d844p@chr10:112524543..112524547, +
4.68e-66FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_8b4c4ab381a444b7d40f04f52bd9d844p3@MYL7
4.68e-66FFCP PHASE2:Hg19::chr10:112524543..112524547,+#_8b4c4ab381a444b7d40f04f52bd9d844p@chr10:112524543..112524547, +
4.68e-66FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_8b4c4ab381a444b7d40f04f52bd9d844p3@MYL7
5.88e-66FFCP PHASE2:Hg19::chr6:36812225..36812238,-#_ed9cca3ae049e6f9823074663748bfa5p@chr6:36812225..36812238, -
5.88e-66FFCP PHASE1:Hg19::chr6:36812225..36812238,-#_ed9cca3ae049e6f9823074663748bfa5p@chr6:36812225..36812238, -
6.53e-66FFCP PHASE1:Hg19::chr2:168104544..168104551,+#_16dcfa8d34cc5782d5790de64aa78291p52@XIRP2
6.53e-66FFCP PHASE2:Hg19::chr2:168104544..168104551,+#_16dcfa8d34cc5782d5790de64aa78291p52@XIRP2
6.53e-66FFCP PHASE2:Hg19::chr4:62999459..62999462,+#_16dcfa8d34cc5782d5790de64aa78291p@chr4:62999459..62999462, +
6.53e-66FFCP PHASE1:Hg19::chr4:62999459..62999462,+#_16dcfa8d34cc5782d5790de64aa78291p@chr4:62999459..62999462, +
1.15e-65FFCP PHASE1:Hg19::chrX:121555838..121555874,+#_1d520b1fe38be1b16944dcf85b2def98p@chrX:121555838..121555874, +
1.15e-65FFCP PHASE2:Hg19::chrX:121555838..121555874,+#_1d520b1fe38be1b16944dcf85b2def98p@chrX:121555838..121555874, +
1.15e-65FFCP PHASE1:Hg19::chr7:123302841..123302854,+#_1d520b1fe38be1b16944dcf85b2def98p@chr7:123302841..123302854, +
1.15e-65FFCP PHASE2:Hg19::chr7:123302841..123302854,+#_1d520b1fe38be1b16944dcf85b2def98p@chr7:123302841..123302854, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Layer that lines the lumen of the heart.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the heart comprised of thin serous membrane, composed of endothelial tissue, that lines the interior of the heart.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.