Personal tools

UBERON:0002702

From FANTOM5_SSTAR

Jump to: navigation, search

Name:middle frontal gyrus
Namespace:FANTOM
Definition:"The middle frontal gyrus makes up about one-third of the frontal lobe of the human brain. (A gyrus is one of the prominent 'bumps' or 'ridges' on the surface of the human brain. ) The middle frontal gyrus, like the inferior frontal gyrus and the superior frontal gyrus, is more of a region than a true gyrus. The borders of the middle frontal gyrus are the inferior frontal sulcus below; the superior frontal sulcus above; and the precentral sulcus behind. [WP,unvetted]." [Wikipedia:Middle_frontal_gyrus]
Xrefs:
links:

BTO:0004834
FMA:61859
[ Middle_frontal_gyrus.png Middle_frontal_gyrus.png]
[ 200px-Middle_frontal_gyrus.png 200px-Middle_frontal_gyrus.png]
ncithesaurus:Middle_Frontal_Gyrus
NIF_GrossAnatomy:birnlex_1451

SCTID:362332009
Synonyms: "gyrus frontalis medialis" EXACT [FMA:61859, FMA:TA]
"gyrus frontalis medius" RELATED LATIN [Wikipedia:Middle_frontal_gyrus]
"intermediate frontal gyrus" EXACT [FMA:61859]
"medial frontal gyrus" EXACT [FMA:61859]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0015593(frontal gyrus)
part_of:UBERON:0001870(frontal cortex)



Children

is a:FF:10150-102I6 (medial frontal gyrus, adult, donor10252),FF:10170-103B8 (medial frontal gyrus - adult, donor10196),FF:10352-105E1 (medial frontal gyrus, newborn, donor10223),FF:10368-105F8 (medial frontal gyrus, adult, donor10258)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002702 (middle frontal gyrus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.75e-130FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fbp@chr5:160720498..160720507, -
1.75e-130FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fbp@chr5:160720498..160720507, -
1.55e-98FFCP PHASE1:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2p@chr6:133275544..133275556, +
1.55e-98FFCP PHASE2:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2p@chr6:133275544..133275556, +
2.56e-98FFCP PHASE2:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3p20@NEFM
2.56e-98FFCP PHASE1:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3p20@NEFM
3.49e-79FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968p@chr2:17830681..17830687, +
3.49e-79FFCP PHASE2:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968p35@GPM6A
3.49e-79FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968p@chr2:17830681..17830687, +
3.49e-79FFCP PHASE1:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968p35@GPM6A
7.79e-79FFCP PHASE2:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7p@chr6:133275530..133275540, +
7.79e-79FFCP PHASE1:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7p@chr6:133275530..133275540, +
1.16e-78FFCP PHASE1:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41p20@STK24
1.16e-78FFCP PHASE2:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41p20@STK24
2.03e-66FFCP PHASE1:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09ep@chr5:143108438..143108440, -
2.03e-66FFCP PHASE2:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09ep@chr5:143108438..143108440, -
2.84e-66FFCP PHASE1:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8p8@ZNF365
2.84e-66FFCP PHASE2:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8p8@ZNF365
5.53e-66FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344p@chr2:86707340..86707351, +
5.53e-66FFCP PHASE2:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344p6@OMG
5.53e-66FFCP PHASE1:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344p6@OMG
5.53e-66FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344p@chr2:86707340..86707351, +
7.73e-66FFCP PHASE2:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069cap@chr1:36181014..36181023, -
7.73e-66FFCP PHASE1:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069cap@chr1:36181014..36181023, -
1.51e-57FFCP PHASE1:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cdep@chr20:1260281..1260284, +
1.51e-57FFCP PHASE2:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cdep@chr20:1260281..1260284, +
4.77e-57FFCP PHASE1:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103p@chr12:79843478..79843487, +
4.77e-57FFCP PHASE2:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103p@chr12:79843478..79843487, +
8.47e-57FFCP PHASE2:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794+, p@chr8:35828115..35828130
8.47e-57FFCP PHASE1:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794p@chr8:35828115..35828130, +
8.47e-57FFCP PHASE1:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794p@chr2:44554050..44554063, -
8.47e-57FFCP PHASE2:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794p@chr2:44554050..44554063, -
8.47e-57FFCP PHASE2:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794p37@ABR
8.47e-57FFCP PHASE1:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794p37@ABR
1.46e-50FFCP PHASE2:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1p@chr11:133197324..133197336, -
1.46e-50FFCP PHASE1:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1p@chr11:133197324..133197336, -
2.74e-50FFCP PHASE2:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482p19@SV2B
2.74e-50FFCP PHASE1:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482p6@CCDC25
2.74e-50FFCP PHASE1:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482p15@OTUD4
2.74e-50FFCP PHASE1:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482p4@LINC00087
2.74e-50FFCP PHASE1:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482p19@SV2B
2.74e-50FFCP PHASE2:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482p6@CCDC25
2.74e-50FFCP PHASE2:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482p15@OTUD4
2.74e-50FFCP PHASE2:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482p4@LINC00087
4.0e-50FFCP PHASE1:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69ep@chr2:166159804..166159805, +
4.0e-50FFCP PHASE2:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69ep@chr2:166159804..166159805, +
4.52e-50FFCP PHASE1:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919p@chr11:132901592..132901601, -
4.52e-50FFCP PHASE1:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919p@chr6:73906231..73906237, +
4.52e-50FFCP PHASE1:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919p9@MRPS30
4.52e-50FFCP PHASE1:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919p@chr10:3442892..3442893, +
4.52e-50FFCP PHASE2:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919p@chr14:72975302..72975305, +
4.52e-50FFCP PHASE2:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919p@chr5:27707663..27707672, +
4.52e-50FFCP PHASE2:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919p9@MRPS30
4.52e-50FFCP PHASE2:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919p@chr6:73906231..73906237, +
4.52e-50FFCP PHASE2:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919-, p@chr11:132901592..132901601
4.52e-50FFCP PHASE2:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919p@chr10:3442892..3442893, +
4.52e-50FFCP PHASE1:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919p@chr5:19774915..19774916, -
4.52e-50FFCP PHASE2:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919p@chr5:19774915..19774916, -
4.52e-50FFCP PHASE1:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919p@chr14:72975302..72975305, +
4.52e-50FFCP PHASE1:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919p@chr5:27707663..27707672, +
5.15e-50FFCP PHASE1:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658p@chr6:112803862..112803893, +
5.15e-50FFCP PHASE2:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658+, p@chr6:112803862..112803893
6.61e-50FFCP PHASE1:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759p@chr7:82583500..82583510, -
6.61e-50FFCP PHASE2:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759p@chr7:82583500..82583510, -
8.5e-50FFCP PHASE1:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13p@chr2:60695331..60695343, -
8.5e-50FFCP PHASE2:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13p@chr2:60695331..60695343, -
4.0e-45FFCP PHASE1:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7fp33@KLF13
4.0e-45FFCP PHASE2:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7fp33@KLF13
9.79e-45FFCP PHASE2:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66p@chr3:49706223..49706234, +
9.79e-45FFCP PHASE1:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66p@chr4:143680975..143680979, -
9.79e-45FFCP PHASE1:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66p@chr3:49706223..49706234, +
9.79e-45FFCP PHASE2:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66p@chr4:143680975..143680979, -
1.22e-44FFCP PHASE1:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731e+, p@chr3:121026029..121026045
1.22e-44FFCP PHASE2:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731ep@chr3:121026029..121026045, +
1.22e-44FFCP PHASE2:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731ep@chr13:89815478..89815491, -
1.22e-44FFCP PHASE1:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731ep@chr13:89815478..89815491, -
2.39e-44FFCP PHASE1:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77p@chr5:21778572..21778576, -
2.39e-44FFCP PHASE2:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77p@chr5:21778572..21778576, -
4.89e-41FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681p@chr21:16999470..16999481, -
4.89e-41FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681p@chr21:16999470..16999481, -
5.99e-41FFCP PHASE2:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64p@chr5:165957466..165957467, -
5.99e-41FFCP PHASE1:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64p@chr5:165957466..165957467, -
8.98e-41FFCP PHASE1:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3p@chr6:69650460..69650462, +
8.98e-41FFCP PHASE2:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3p@chr6:69650460..69650462, +
1.1e-40FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3p@chr18:5721892..5721909, +
1.1e-40FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3p@chr18:5721892..5721909, +
1.34e-40FFCP PHASE2:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7p@chr17:57158545..57158556, -
1.34e-40FFCP PHASE1:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7p@chr17:57158545..57158556, -
1.64e-40FFCP PHASE1:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16p11@KCNC2
1.64e-40FFCP PHASE1:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16p@chr7:32519192..32519195, -
1.64e-40FFCP PHASE1:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16p15@RIMS1
1.64e-40FFCP PHASE2:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16p15@RIMS1
1.64e-40FFCP PHASE2:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16p@chr7:32519192..32519195, -
1.64e-40FFCP PHASE2:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16p11@KCNC2
2.01e-40FFCP PHASE1:Hg19::chr1:177152304..177152308,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr1:177152304..177152308, +
2.01e-40FFCP PHASE1:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcaep3@AB384875
2.01e-40FFCP PHASE1:Hg19::chr12:55368219..55368234,-#_3fd2d2ceeaea387e974f69de43b4bcaep@chr12:55368219..55368234, -
2.01e-40FFCP PHASE2:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcaep3@AB384875
2.01e-40FFCP PHASE2:Hg19::chr1:177152304..177152308,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr1:177152304..177152308, +
2.01e-40FFCP PHASE2:Hg19::chr12:121085388..121085391,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr12:121085388..121085391, +