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UBERON:0004732

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Name:segmental subdivision of nervous system
Namespace:FANTOM
Definition:"An organ segment that is part of a nervous system [Obol]." [OBOL:automatic]
Xrefs:
links:
FBbt:00005140
Synonyms: "neuromere" RELATED [FBbt:00005140]
Comments:Editor note: revisit this after CARO is revised and/or we have defined metameric segment

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000063(organ segment)
part_of:UBERON:0001016(nervous system)



Children

is a:UBERON:0002464 (nerve trunk),UBERON:0004733 (segmental subdivision of hindbrain)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004732 (segmental subdivision of nervous system), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.62e-102FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_5d04f7d17867be525f5bd55a2647f684p@chr2:72381655..72381673, -
5.62e-102FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_5d04f7d17867be525f5bd55a2647f684p@chr2:72381655..72381673, -
3.84e-82FFCP PHASE1:Hg19::chr11:20621148..20621166,+#_e0fbfc9fbfd07b44352c44add89408aap1@SLC6A5
3.84e-82FFCP PHASE2:Hg19::chr11:20621148..20621166,+#_e0fbfc9fbfd07b44352c44add89408aap1@SLC6A5
7.15e-78FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_3784ef53a752239651d3e646191ffaafp3@CRTAM
7.15e-78FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_3784ef53a752239651d3e646191ffaafp3@CRTAM
8.17e-78FFCP PHASE1:Hg19::chr9:135457981..135458003,+#_59c6b8314a891fcc5d100f5ab09f48d9p1@BARHL1
8.17e-78FFCP PHASE2:Hg19::chr9:135457981..135458003,+#_59c6b8314a891fcc5d100f5ab09f48d9p1@BARHL1
7.52e-76FFCP PHASE1:Hg19::chr6:152884391..152884402,-#_52a0d24a07049f84f787228372ffc8a7p@chr6:152884391..152884402, -
7.52e-76FFCP PHASE2:Hg19::chr6:152884391..152884402,-#_52a0d24a07049f84f787228372ffc8a7p@chr6:152884391..152884402, -
7.52e-76FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_52a0d24a07049f84f787228372ffc8a7p@chr4:117873850..117873861, -
7.52e-76FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_52a0d24a07049f84f787228372ffc8a7p@chr4:117873850..117873861, -
1.89e-74FFCP PHASE1:Hg19::chr9:8779377..8779397,-#_9284dbe40b4fb8dd413f709cf459ff16p@chr9:8779377..8779397, -
1.89e-74FFCP PHASE2:Hg19::chr9:8779377..8779397,-#_9284dbe40b4fb8dd413f709cf459ff16p@chr9:8779377..8779397, -
2.63e-68FFCP PHASE1:Hg19::chr16:76311443..76311452,+#_ffa66f6a2824f269a7470d4d3a1241dbp9@CNTNAP4
2.63e-68FFCP PHASE2:Hg19::chr16:76311443..76311452,+#_ffa66f6a2824f269a7470d4d3a1241dbp9@CNTNAP4
2.95e-68FFCP PHASE1:Hg19::chr6:152884406..152884453,-#_63a81745b3ccf2a7acbe8550caca07a7p@chr6:152884406..152884453, -
2.95e-68FFCP PHASE2:Hg19::chr6:152884406..152884453,-#_63a81745b3ccf2a7acbe8550caca07a7p@chr6:152884406..152884453, -
4.7e-68FFCP PHASE1:Hg19::chr13:100311142..100311153,+#_30046e320eb392508f4bc23461992558p@chr13:100311142..100311153, +
4.7e-68FFCP PHASE2:Hg19::chr13:100311142..100311153,+#_30046e320eb392508f4bc23461992558p@chr13:100311142..100311153, +
9.42e-68FFCP PHASE1:Hg19::chr9:128998376..128998387,-#_81027e7de144f456a115e7398d05c38bp@chr9:128998376..128998387, -
9.42e-68FFCP PHASE2:Hg19::chr9:128998376..128998387,-#_81027e7de144f456a115e7398d05c38bp@chr9:128998376..128998387, -
1.89e-67FFCP PHASE2:Hg19::chr10:130489605..130489614,-#_e99cafbbee78e6f7d9aab2cc71f530adp@chr10:130489605..130489614, -
1.89e-67FFCP PHASE1:Hg19::chr10:130489605..130489614,-#_e99cafbbee78e6f7d9aab2cc71f530adp@chr10:130489605..130489614, -
1.03e-64FFCP PHASE2:Hg19::chr9:73736442..73736451,-#_518184d78bb4e2c52154c1c61b156bb9p9@TRPM3
1.03e-64FFCP PHASE1:Hg19::chr9:73736442..73736451,-#_518184d78bb4e2c52154c1c61b156bb9p9@TRPM3
2.06e-63FFCP PHASE2:Hg19::chr3:147110022..147110050,-#_fa5fc05079b9489280fa1b250ec6bbfap8@ZIC4
2.06e-63FFCP PHASE2:Hg19::chr5:161112715..161112736,+#_fa5fc05079b9489280fa1b250ec6bbfap1@GABRA6
2.06e-63FFCP PHASE1:Hg19::chr3:147110022..147110050,-#_fa5fc05079b9489280fa1b250ec6bbfap8@ZIC4
2.06e-63FFCP PHASE2:Hg19::chr11:43855489..43855503,-#_fa5fc05079b9489280fa1b250ec6bbfap1@ENST00000524643
2.06e-63FFCP PHASE1:Hg19::chr11:43855489..43855503,-#_fa5fc05079b9489280fa1b250ec6bbfap1@ENST00000524643
2.06e-63FFCP PHASE1:Hg19::chr5:161112715..161112736,+#_fa5fc05079b9489280fa1b250ec6bbfap1@GABRA6
2.34e-63FFCP PHASE1:Hg19::chr6:72922590..72922605,+#_b9965eb9c441c44b529ce01b8d278433p5@RIMS1
2.34e-63FFCP PHASE1:Hg19::chr15:54378951..54378954,+#_b9965eb9c441c44b529ce01b8d278433p@chr15:54378951..54378954, +
2.34e-63FFCP PHASE2:Hg19::chr6:72922590..72922605,+#_b9965eb9c441c44b529ce01b8d278433p5@RIMS1
2.34e-63FFCP PHASE2:Hg19::chr15:54378951..54378954,+#_b9965eb9c441c44b529ce01b8d278433p@chr15:54378951..54378954, +
2.67e-63FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_0772d4c1c018462e3ce613ef1eef257cp17@BDNF
2.67e-63FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_0772d4c1c018462e3ce613ef1eef257cp17@BDNF
1.03e-61FFCP PHASE2:Hg19::chr19:29493486..29493497,+#_d5591540787d2986a5652a11bbd0c645p2@LOC100505835
1.03e-61FFCP PHASE1:Hg19::chr19:29493486..29493497,+#_d5591540787d2986a5652a11bbd0c645p2@LOC100505835
1.21e-61FFCP PHASE1:Hg19::chr16:290098..290109,+#_1fbfd1634524f33bc1fa735f3062d943p13@ITFG3
1.21e-61FFCP PHASE2:Hg19::chr16:290098..290109,+#_1fbfd1634524f33bc1fa735f3062d943p13@ITFG3
4.89e-61FFCP PHASE2:Hg19::chr4:71928360..71928370,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr4:71928360..71928370, +
4.89e-61FFCP PHASE2:Hg19::chr17:36720287..36720302,-#_93614b595f7c54f4f4d9466d20a55bc4p18@SRCIN1
4.89e-61FFCP PHASE1:Hg19::chr14:52168958..52169000,+#_93614b595f7c54f4f4d9466d20a55bc4p27@FRMD6
4.89e-61FFCP PHASE1:Hg19::chr14:60031159..60031181,-#_93614b595f7c54f4f4d9466d20a55bc4p1@ENST00000556936
4.89e-61FFCP PHASE1:Hg19::chr14:60049016..60049032,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr14:60049016..60049032, -
4.89e-61FFCP PHASE1:Hg19::chr14:77582905..77582916,+#_93614b595f7c54f4f4d9466d20a55bc4p5@TMEM63C
4.89e-61FFCP PHASE1:Hg19::chr15:79724672..79724683,+#_93614b595f7c54f4f4d9466d20a55bc4p1@KIAA1024
4.89e-61FFCP PHASE1:Hg19::chr15:81489280..81489292,+#_93614b595f7c54f4f4d9466d20a55bc4p15@IL16
4.89e-61FFCP PHASE1:Hg19::chr17:36720287..36720302,-#_93614b595f7c54f4f4d9466d20a55bc4p18@SRCIN1
4.89e-61FFCP PHASE1:Hg19::chr17:50236110..50236119,-#_93614b595f7c54f4f4d9466d20a55bc4p22@CA10
4.89e-61FFCP PHASE1:Hg19::chr17:588423..588441,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr17:588423..588441, -
4.89e-61FFCP PHASE1:Hg19::chr17:72667462..72667471,+#_93614b595f7c54f4f4d9466d20a55bc4p11@RAB37
4.89e-61FFCP PHASE1:Hg19::chr17:72857611..72857619,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr17:72857611..72857619, -
4.89e-61FFCP PHASE1:Hg19::chr4:71928360..71928370,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr4:71928360..71928370, +
4.89e-61FFCP PHASE1:Hg19::chr5:161112654..161112669,+#_93614b595f7c54f4f4d9466d20a55bc4p2@GABRA6
4.89e-61FFCP PHASE1:Hg19::chr5:161112968..161112988,+#_93614b595f7c54f4f4d9466d20a55bc4p3@GABRA6
4.89e-61FFCP PHASE1:Hg19::chr6:127533959..127533972,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:127533959..127533972, -
4.89e-61FFCP PHASE1:Hg19::chr6:127533978..127533993,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:127533978..127533993, -
4.89e-61FFCP PHASE1:Hg19::chr6:151198021..151198035,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:151198021..151198035, +
4.89e-61FFCP PHASE1:Hg19::chr6:34073743..34073761,-#_93614b595f7c54f4f4d9466d20a55bc4p1@GRM4
4.89e-61FFCP PHASE1:Hg19::chr6:72922614..72922626,+#_93614b595f7c54f4f4d9466d20a55bc4p19@RIMS1
4.89e-61FFCP PHASE1:Hg19::chr6:72922728..72922737,+#_93614b595f7c54f4f4d9466d20a55bc4p29@RIMS1
4.89e-61FFCP PHASE2:Hg19::chr1:16366392..16366411,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr1:16366392..16366411, -
4.89e-61FFCP PHASE2:Hg19::chr9:135538143..135538152,-#_93614b595f7c54f4f4d9466d20a55bc4p2@CU680380
4.89e-61FFCP PHASE2:Hg19::chr3:147125238..147125275,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr3:147125238..147125275, +
4.89e-61FFCP PHASE2:Hg19::chr14:52168958..52169000,+#_93614b595f7c54f4f4d9466d20a55bc4p27@FRMD6
4.89e-61FFCP PHASE2:Hg19::chr14:60031159..60031181,-#_93614b595f7c54f4f4d9466d20a55bc4p1@ENST00000556936
4.89e-61FFCP PHASE2:Hg19::chr14:60049016..60049032,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr14:60049016..60049032, -
4.89e-61FFCP PHASE2:Hg19::chr14:77582905..77582916,+#_93614b595f7c54f4f4d9466d20a55bc4p5@TMEM63C
4.89e-61FFCP PHASE1:Hg19::chr18:8783586..8783597,+#_93614b595f7c54f4f4d9466d20a55bc4p2@CCDC165
4.89e-61FFCP PHASE1:Hg19::chr18:8783637..8783650,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr18:8783637..8783650, +
4.89e-61FFCP PHASE1:Hg19::chr1:16366392..16366411,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr1:16366392..16366411, -
4.89e-61FFCP PHASE1:Hg19::chr20:39790925..39790940,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr20:39790925..39790940, +
4.89e-61FFCP PHASE1:Hg19::chr20:45061746..45061763,-#_93614b595f7c54f4f4d9466d20a55bc4p4@ELMO2
4.89e-61FFCP PHASE2:Hg19::chr2:39894722..39894736,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr2:39894722..39894736, -
4.89e-61FFCP PHASE2:Hg19::chr11:122733033..122733052,+#_93614b595f7c54f4f4d9466d20a55bc4p4@CRTAM
4.89e-61FFCP PHASE2:Hg19::chr11:123447984..123447987,+#_93614b595f7c54f4f4d9466d20a55bc4p7@AB384137
4.89e-61FFCP PHASE2:Hg19::chr11:123448159..123448170,+#_93614b595f7c54f4f4d9466d20a55bc4p4@AB384137
4.89e-61FFCP PHASE2:Hg19::chr6:151198021..151198035,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:151198021..151198035, +
4.89e-61FFCP PHASE2:Hg19::chr18:8783586..8783597,+#_93614b595f7c54f4f4d9466d20a55bc4p2@CCDC165
4.89e-61FFCP PHASE2:Hg19::chr18:8783637..8783650,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr18:8783637..8783650, +
4.89e-61FFCP PHASE2:Hg19::chr6:34073743..34073761,-#_93614b595f7c54f4f4d9466d20a55bc4p1@GRM4
4.89e-61FFCP PHASE2:Hg19::chr6:72922614..72922626,+#_93614b595f7c54f4f4d9466d20a55bc4p19@RIMS1
4.89e-61FFCP PHASE2:Hg19::chr6:72922728..72922737,+#_93614b595f7c54f4f4d9466d20a55bc4p29@RIMS1
4.89e-61FFCP PHASE1:Hg19::chr11:122733033..122733052,+#_93614b595f7c54f4f4d9466d20a55bc4p4@CRTAM
4.89e-61FFCP PHASE1:Hg19::chr11:123447984..123447987,+#_93614b595f7c54f4f4d9466d20a55bc4p7@AB384137
4.89e-61FFCP PHASE1:Hg19::chr11:123448159..123448170,+#_93614b595f7c54f4f4d9466d20a55bc4p4@AB384137
4.89e-61FFCP PHASE2:Hg19::chr5:161112654..161112669,+#_93614b595f7c54f4f4d9466d20a55bc4p2@GABRA6
4.89e-61FFCP PHASE2:Hg19::chr5:161112968..161112988,+#_93614b595f7c54f4f4d9466d20a55bc4p3@GABRA6
4.89e-61FFCP PHASE2:Hg19::chr17:50236110..50236119,-#_93614b595f7c54f4f4d9466d20a55bc4p22@CA10
4.89e-61FFCP PHASE2:Hg19::chr17:588423..588441,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr17:588423..588441, -
4.89e-61FFCP PHASE2:Hg19::chr17:72667462..72667471,+#_93614b595f7c54f4f4d9466d20a55bc4p11@RAB37
4.89e-61FFCP PHASE2:Hg19::chr17:72857611..72857619,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr17:72857611..72857619, -
4.89e-61FFCP PHASE2:Hg19::chr6:127533959..127533972,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:127533959..127533972, -
4.89e-61FFCP PHASE2:Hg19::chr6:127533978..127533993,-#_93614b595f7c54f4f4d9466d20a55bc4p@chr6:127533978..127533993, -
4.89e-61FFCP PHASE2:Hg19::chr20:39790925..39790940,+#_93614b595f7c54f4f4d9466d20a55bc4p@chr20:39790925..39790940, +
4.89e-61FFCP PHASE2:Hg19::chr20:45061746..45061763,-#_93614b595f7c54f4f4d9466d20a55bc4p4@ELMO2
4.89e-61FFCP PHASE2:Hg19::chr2:149835088..149835109,+#_93614b595f7c54f4f4d9466d20a55bc4p9@KIF5C