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UBERON:0004821

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Name:pulmonary alveolus epithelium
Namespace:FANTOM
Definition:"the epithelial layer of the alveoli[MP]. The layer of cells covering the lining of the tiny air sacs at the end of the bronchioles[BTO]." [BTO:0003511, MP:0010898]
Xrefs:
links:

BTO:0003511
FMA:63915

MA:0001771
Synonyms: "alveolus epithelial tissue" EXACT [OBOL:automatic]
"alveolus epithelium" EXACT [MA:0001771]
"epithelial tissue of alveolus" EXACT [OBOL:automatic]
"epithelium of alveolus" EXACT [OBOL:automatic]
"pulmonary alveolar epithelium" EXACT [FMA:63915]
"pulmonary alveolus epithelium" EXACT [MP:0010898]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000115(lung epithelium),UBERON:0000487(simple squamous epithelium)
part_of:UBERON:0002299(alveolus of lung),UBERON:0004894(alveolar wall)



Children

derives from:FF:0102060 (bronchioalveolar carcinoma cell sample)
part of:CL:0000322 (pneumocyte)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004821 (pulmonary alveolus epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.39e-66FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_cb14ad40d5e2d830ba27818ee2fc5b35p14@DNMBP
2.39e-66FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_cb14ad40d5e2d830ba27818ee2fc5b35p1@SSX5
2.39e-66FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_cb14ad40d5e2d830ba27818ee2fc5b35p9@CPXM1
2.39e-66FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_cb14ad40d5e2d830ba27818ee2fc5b35p13@DNMBP
2.39e-66FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_cb14ad40d5e2d830ba27818ee2fc5b35p13@DNMBP
2.39e-66FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_cb14ad40d5e2d830ba27818ee2fc5b35p12@CLEC16A
2.39e-66FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_cb14ad40d5e2d830ba27818ee2fc5b35p1@ENST00000418699, p1@ENST00000432330
2.39e-66FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_cb14ad40d5e2d830ba27818ee2fc5b35p9@CPXM1
2.39e-66FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_cb14ad40d5e2d830ba27818ee2fc5b35p13@CPXM1
2.39e-66FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr17:13574618..13574636, -
2.39e-66FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr14:36536932..36536937, -
2.39e-66FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_cb14ad40d5e2d830ba27818ee2fc5b35p13@CPXM1
2.39e-66FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_cb14ad40d5e2d830ba27818ee2fc5b35p12@CPXM1
2.39e-66FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_cb14ad40d5e2d830ba27818ee2fc5b35p1@ENST00000430271
2.39e-66FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr17:63511856..63511858, -
2.39e-66FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr3:87647430..87647437, -
2.39e-66FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_cb14ad40d5e2d830ba27818ee2fc5b35p1@SSX5
2.39e-66FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr17:63511856..63511858, -
2.39e-66FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_cb14ad40d5e2d830ba27818ee2fc5b35p12@CPXM1
2.39e-66FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_cb14ad40d5e2d830ba27818ee2fc5b35p16@CPXM1
2.39e-66FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_cb14ad40d5e2d830ba27818ee2fc5b35-, p@chr14:36536932..36536937
2.39e-66FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_cb14ad40d5e2d830ba27818ee2fc5b35p1@ENST00000418699, p1@ENST00000432330
2.39e-66FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr17:13574618..13574636, -
2.39e-66FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_cb14ad40d5e2d830ba27818ee2fc5b35p@chr3:87647430..87647437, -
2.39e-66FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_cb14ad40d5e2d830ba27818ee2fc5b35p1@ENST00000430271
2.39e-66FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_cb14ad40d5e2d830ba27818ee2fc5b35p14@DNMBP
2.39e-66FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_cb14ad40d5e2d830ba27818ee2fc5b35p12@CLEC16A
2.39e-66FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_cb14ad40d5e2d830ba27818ee2fc5b35p16@CPXM1
1.53e-44FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_8680a7fd5a5a3746947ba135da3e4d84p@chr2:191696381..191696384, -
1.53e-44FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_8680a7fd5a5a3746947ba135da3e4d84p@chr2:191696381..191696384, -
4.27e-34FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_462031bf5fbe41c7d8a09765460155f6p@chr4:169956294..169956301, -
4.27e-34FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_462031bf5fbe41c7d8a09765460155f6p11@DNMBP
4.27e-34FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_462031bf5fbe41c7d8a09765460155f6p11@DNMBP
4.27e-34FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_462031bf5fbe41c7d8a09765460155f6p@chr11:41809203..41809208, -
4.27e-34FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_462031bf5fbe41c7d8a09765460155f6p@chr11:106266838..106266843, +
4.27e-34FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_462031bf5fbe41c7d8a09765460155f6p3@FMR1NB
4.27e-34FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_462031bf5fbe41c7d8a09765460155f6-, p@chr8:122157279..122157284
4.27e-34FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_462031bf5fbe41c7d8a09765460155f6p3@FMR1NB
4.27e-34FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_462031bf5fbe41c7d8a09765460155f6p@chr9:103785643..103785646, -
4.27e-34FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_462031bf5fbe41c7d8a09765460155f6p30@NELF
4.27e-34FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_462031bf5fbe41c7d8a09765460155f6p30@PDP1
4.27e-34FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_462031bf5fbe41c7d8a09765460155f6p30@PDP1
4.27e-34FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_462031bf5fbe41c7d8a09765460155f6-, p@chr4:169956294..169956301
4.27e-34FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_462031bf5fbe41c7d8a09765460155f6p7@DNMBP
4.27e-34FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_462031bf5fbe41c7d8a09765460155f6p@chr11:104005546..104005596, -
4.27e-34FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_462031bf5fbe41c7d8a09765460155f6p7@DNMBP
4.27e-34FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_462031bf5fbe41c7d8a09765460155f6p30@NELF
4.27e-34FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_462031bf5fbe41c7d8a09765460155f6p@chr8:122157279..122157284, -
4.27e-34FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_462031bf5fbe41c7d8a09765460155f6-, p@chr11:41809203..41809208
4.27e-34FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_462031bf5fbe41c7d8a09765460155f6+, p@chr11:106266838..106266843
4.27e-34FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_462031bf5fbe41c7d8a09765460155f6p@chr11:104005546..104005596, -
4.27e-34FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_462031bf5fbe41c7d8a09765460155f6p@chr9:103785643..103785646, -
5.96e-34FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_0bcc5e51b0fea80a33c7281fa81290dap36@NELF
5.96e-34FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr3:139035972..139036016, -
5.96e-34FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr12:65386452..65386492, -
5.96e-34FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399245..45399258, +
5.96e-34FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr15:55806847..55806854, -
5.96e-34FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_0bcc5e51b0fea80a33c7281fa81290dap5@C20orf141
5.96e-34FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399294..45399301, +
5.96e-34FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:46985426..46985427, -
5.96e-34FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_0bcc5e51b0fea80a33c7281fa81290dap12@AADAT
5.96e-34FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_0bcc5e51b0fea80a33c7281fa81290dap34@NELF
5.96e-34FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399263..45399274, +
5.96e-34FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_0bcc5e51b0fea80a33c7281fa81290dap36@NELF
5.96e-34FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45405332..45405343, +
5.96e-34FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:169691363..169691375, -
5.96e-34FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr15:55806847..55806854, -
5.96e-34FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_0bcc5e51b0fea80a33c7281fa81290dap5@C20orf141
5.96e-34FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr12:65386452..65386492, -
5.96e-34FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:141743015..141743025, +
5.96e-34FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399294..45399301, +
5.96e-34FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_0bcc5e51b0fea80a33c7281fa81290dap34@NELF
5.96e-34FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_0bcc5e51b0fea80a33c7281fa81290da+, p@chr6:45405393..45405412
5.96e-34FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45405332..45405343, +
5.96e-34FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr3:139035972..139036016, -
5.96e-34FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399533..45399540, +
5.96e-34FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_0bcc5e51b0fea80a33c7281fa81290dap6@INSIG2
5.96e-34FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr1:119837700..119837705, +
5.96e-34FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr1:93054640..93054674, -
5.96e-34FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399245..45399258, +
5.96e-34FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr1:93054640..93054674, -
5.96e-34FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45405393..45405412, +
5.96e-34FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:169691363..169691375, -
5.96e-34FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr17:63533845..63533851, -
5.96e-34FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_0bcc5e51b0fea80a33c7281fa81290dap6@INSIG2
5.96e-34FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399533..45399540, +
5.96e-34FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr17:63533845..63533851, -
5.96e-34FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:141743015..141743025, +
5.96e-34FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:46985426..46985427, -
5.96e-34FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr6:45399263..45399274, +
5.96e-34FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_0bcc5e51b0fea80a33c7281fa81290dap12@AADAT
5.96e-34FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_0bcc5e51b0fea80a33c7281fa81290dap@chr1:119837700..119837705, +
1.71e-30FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_e39e68a690a7b2e8c228953a340643b5p1@BC018659
1.71e-30FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_e39e68a690a7b2e8c228953a340643b5p1@BC018659
1.59e-27FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_9f9f00b15aed320f8a35df6eec2f171c+, p@chr14:29047235..29047244
1.59e-27FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_9f9f00b15aed320f8a35df6eec2f171cp@chr14:29047235..29047244, +
3.56e-27FFCP PHASE1:Hg19::chr17:171082..171101,+#_59fcbd933f4dd12753b3028f44dd0956p@chr17:171082..171101, +
3.56e-27FFCP PHASE2:Hg19::chr17:171082..171101,+#_59fcbd933f4dd12753b3028f44dd0956p@chr17:171082..171101, +
7.93e-25FFCP PHASE1:Hg19::chr7:27163592..27163605,-#_d8d2ecc3d8c72e0ee70c77991d4c9dc6p@chr7:27163592..27163605, -
7.93e-25FFCP PHASE2:Hg19::chr7:27163592..27163605,-#_d8d2ecc3d8c72e0ee70c77991d4c9dc6p@chr7:27163592..27163605, -