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UBERON:0004875

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Name:nephrogenic cord
Namespace:FANTOM
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42+, p@chr10:127470655..127470664
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a-, p@chr9:26611246..26611253
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a+, p@chr9:26732045..26732085
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
4.54e-44FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26688157..26688159, -
4.54e-44FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:104945515..104945524, -
4.54e-44FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:192816674..192816714, +
4.54e-44FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585714..113585722, -
4.54e-44FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21385325..21385329, -
4.54e-44FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_2c808356ccd804cd36d69a04f78b05bep6@Defb20
4.54e-44FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_2c808356ccd804cd36d69a04f78b05bep@chr19:24582739..24582748, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379477..31379481, +
4.54e-44FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_2c808356ccd804cd36d69a04f78b05bep@chr5:77645280..77645295, -
4.54e-44FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:74440187..74440209, -
4.54e-44FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:44319583..44319592, -
4.54e-44FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_2c808356ccd804cd36d69a04f78b05bep2@Defb23
4.54e-44FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379845..31379855, +
4.54e-44FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378766..21378781, +
4.54e-44FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_2c808356ccd804cd36d69a04f78b05bep15@Pgap2
4.54e-44FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:147624258..147624285, -
4.54e-44FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_2c808356ccd804cd36d69a04f78b05bep2@Rnase10
4.54e-44FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_2c808356ccd804cd36d69a04f78b05bep@chr17:24670830..24670845, +
4.54e-44FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496166..130496188, -
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05bep2@ENSMUST00000152401
4.54e-44FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_2c808356ccd804cd36d69a04f78b05bep@chr3:103650758..103650778, +
4.54e-44FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_2c808356ccd804cd36d69a04f78b05bep@chr9:70761931..70761971, +
4.54e-44FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_2c808356ccd804cd36d69a04f78b05bep3@9230104L09Rik
4.54e-44FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_2c808356ccd804cd36d69a04f78b05bep3@Rnase13
4.54e-44FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:155738967..155738974, +
4.54e-44FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:160573065..160573077, +
4.54e-44FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_2c808356ccd804cd36d69a04f78b05bep11@Arhgef40
4.54e-44FFCP PHASE1:Mm9::chr9:35651679..35651691,-#_2c808356ccd804cd36d69a04f78b05bep5@9230110F15Rik
4.54e-44FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:164787162..164787188, -
4.54e-44FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:22547027..22547063, +
4.54e-44FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:56515486..56515496, +
4.54e-44FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_2c808356ccd804cd36d69a04f78b05bep@chr19:17585885..17585901, -
4.54e-44FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_2c808356ccd804cd36d69a04f78b05bep@chr4:134893699..134893708, +
4.54e-44FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155966..90155989, +
4.54e-44FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:116399500..116399516, +
4.54e-44FFCP PHASE2:Mm9::chr9:100350777..100350782,+#_2c808356ccd804cd36d69a04f78b05bep@chr9:100350777..100350782, +
4.54e-44FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:124447371..124447383, +
4.54e-44FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798097..75798101, -
4.54e-44FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:54678902..54678911, -
4.54e-44FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:35930706..35930717, +
4.54e-44FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21381141..21381155, -
4.54e-44FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:62775330..62775347, -
4.54e-44FFCP PHASE1:Mm9::chr1:90155966..90155989,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155966..90155989, +
4.54e-44FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_2c808356ccd804cd36d69a04f78b05bep@chr5:66513886..66513897, -
4.54e-44FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_2c808356ccd804cd36d69a04f78b05bep4@Atp4a
4.54e-44FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_2c808356ccd804cd36d69a04f78b05bep2@Wfdc9
4.54e-44FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155722..90155743, +
4.54e-44FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:46301295..46301302, -
4.54e-44FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:85390145..85390153, +
4.54e-44FFCP PHASE1:Mm9::chrX:10488683..10488691,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:10488683..10488691, +
4.54e-44FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_2c808356ccd804cd36d69a04f78b05be+, p@chr6:118298429..118298448
4.54e-44FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87936238..87936249, +
4.54e-44FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_2c808356ccd804cd36d69a04f78b05bep3@Gm3428
4.54e-44FFCP PHASE1:Mm9::chr7:25563187..25563205,+#_2c808356ccd804cd36d69a04f78b05bep@chr7:25563187..25563205, +
4.54e-44FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155722142..155722175, -
4.54e-44FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:114385720..114385732, -
4.54e-44FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:91107095..91107103, +
4.54e-44FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:103896102..103896116, -
4.54e-44FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585714..113585722, -
4.54e-44FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26727675..26727681, -
4.54e-44FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_2c808356ccd804cd36d69a04f78b05bep@chr14:67453354..67453365, -