Personal tools

UBERON:0005153

From FANTOM5_SSTAR

Jump to: navigation, search

Name:epithelial bud
Namespace:FANTOM
Definition:"A bud is a protrusion that forms from an epithelial sheet by localized folding." [GO:0060572]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005157(epithelial fold)



Children

is a:UBERON:0000118 (lung bud),UBERON:0003820 (prostate bud),UBERON:0005333 (mammary bud)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005153 (epithelial bud), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.21e-66FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_6287ee896b6b9305c45a314e795dd1c1p4@Tbx4
1.21e-66FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_6287ee896b6b9305c45a314e795dd1c1p4@Tbx4
1.06e-62FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_5142d203a5d91fe2c979aa38a5359db1p1@ENSMUST00000134305
1.06e-62FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_5142d203a5d91fe2c979aa38a5359db1p1@ENSMUST00000134305
1.52e-61FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_f8aab53f810b2a74a05ecd516dc631c5p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1
1.52e-61FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_f8aab53f810b2a74a05ecd516dc631c5p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1
1.91e-61FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_ab68af0688db03d042cf179990ba7972p6@Tbx4
1.91e-61FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_ab68af0688db03d042cf179990ba7972p6@Tbx4
5.56e-61FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_8aef9c521183748ab76034caad94255ap@chr12:57636003..57636017, -
5.56e-61FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_8aef9c521183748ab76034caad94255ap@chr11:59457994..59457997, -
5.56e-61FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_8aef9c521183748ab76034caad94255ap@chr8:94878479..94878503, -
5.56e-61FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_8aef9c521183748ab76034caad94255ap@chr4:138812977..138812992, +
5.56e-61FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_8aef9c521183748ab76034caad94255ap@chr11:59457994..59457997, -
5.56e-61FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_8aef9c521183748ab76034caad94255ap@chr12:57598716..57598720, -
5.56e-61FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_8aef9c521183748ab76034caad94255ap@chr12:57636003..57636017, -
5.56e-61FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_8aef9c521183748ab76034caad94255ap@chr4:138812977..138812992, +
5.56e-61FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_8aef9c521183748ab76034caad94255ap@chr12:57598716..57598720, -
5.56e-61FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_8aef9c521183748ab76034caad94255ap@chr8:94878479..94878503, -
1.23e-57FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_4fbbfebe3004abd31e2b7ecf855a9010p8@Nkx2-1
1.23e-57FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_4fbbfebe3004abd31e2b7ecf855a9010p8@Nkx2-1
1.37e-57FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_578a7b75a63ffe333ae754f4d693dcccp2@E030019B13Rik
1.37e-57FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_578a7b75a63ffe333ae754f4d693dcccp2@E030019B13Rik
1.53e-57FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_afabe12aa4652523f0f39baefd4232cfp10@Nebl
1.53e-57FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_afabe12aa4652523f0f39baefd4232cfp10@Nebl
1.7e-57FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_7bb938d53691e4c05c7d68a0cdcdb0edp9@Nkx2-1
1.7e-57FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_7bb938d53691e4c05c7d68a0cdcdb0edp9@Nkx2-1
1.79e-56FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_c99f17d2049857025d268bc413c48185p3@Trpm6
1.79e-56FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_c99f17d2049857025d268bc413c48185p@chr12:57598537..57598547, -
1.79e-56FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_c99f17d2049857025d268bc413c48185p@chr12:57598537..57598547, -
1.79e-56FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_c99f17d2049857025d268bc413c48185p3@Trpm6
1.79e-56FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_c99f17d2049857025d268bc413c48185p3@E030019B13Rik
1.79e-56FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_c99f17d2049857025d268bc413c48185p3@E030019B13Rik
2.01e-56FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_3688f5ab048a8c4b987aff34edc721d1p@chr14:115241755..115241762, -
2.01e-56FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_3688f5ab048a8c4b987aff34edc721d1p@chr14:115241755..115241762, -
2.24e-56FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_aa1912b64db7b4ef7f74819af4b437b2p@chr4:138812999..138813015, +
2.24e-56FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_aa1912b64db7b4ef7f74819af4b437b2p@chr4:138812999..138813015, +
6.2e-56FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_99593e1a0f2d874a0f8da25e7abb34d8p3@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_99593e1a0f2d874a0f8da25e7abb34d8p4@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_99593e1a0f2d874a0f8da25e7abb34d8p@chr1:184610062..184610074, +
6.2e-56FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_99593e1a0f2d874a0f8da25e7abb34d8p4@Sftpb
6.2e-56FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_99593e1a0f2d874a0f8da25e7abb34d8p@chr1:184610062..184610074, +
6.2e-56FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr14:70922576..70922589, -
6.2e-56FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr2:66524237..66524246, -
6.2e-56FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr14:70922576..70922589, -
6.2e-56FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr14:70921265..70921285, -
6.2e-56FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr14:70921265..70921285, -
6.2e-56FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_99593e1a0f2d874a0f8da25e7abb34d8p3@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_99593e1a0f2d874a0f8da25e7abb34d8p@chr2:66524237..66524246, -
9.42e-56FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_33718f660f72db084a0b20443c297050p@chr5:120282691..120282701, +
9.42e-56FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_33718f660f72db084a0b20443c297050p@chr5:120282691..120282701, +
3.97e-54FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_6a391edbeaca28dfc3ca6e9cb6c98426p4@E030019B13Rik
3.97e-54FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_6a391edbeaca28dfc3ca6e9cb6c98426p4@E030019B13Rik
1.46e-52FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_09eaa2db067e800e8f6587ccf2920e5ep@chr14:70922007..70922052, +
1.46e-52FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_09eaa2db067e800e8f6587ccf2920e5ep@chr12:57623172..57623185, -
1.46e-52FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_09eaa2db067e800e8f6587ccf2920e5ep@chr14:70922007..70922052, +
1.46e-52FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_09eaa2db067e800e8f6587ccf2920e5ep@chr12:57623172..57623185, -
1.62e-52FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_c53ba1463524ee193a058c15154b1a8bp@chr5:28785436..28785450, -
1.62e-52FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_c53ba1463524ee193a058c15154b1a8bp@chr5:28785436..28785450, -
1.8e-52FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_b92f823018b6d6abd2fda53ce566a401p@chr14:70922459..70922482, -
1.8e-52FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_b92f823018b6d6abd2fda53ce566a401p@chr14:70922459..70922482, -
5.65e-52FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_eff409930c65632df03468c048f81b09p4@Etv5
5.65e-52FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_eff409930c65632df03468c048f81b09p4@Etv5
1.97e-51FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_d3f0d8fed98eae36380aa224746b2485p@chr14:70922486..70922510, -
1.97e-51FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_d3f0d8fed98eae36380aa224746b2485p@chr12:57376690..57376716, -
1.97e-51FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_d3f0d8fed98eae36380aa224746b2485p@chr14:70922486..70922510, -
1.97e-51FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_d3f0d8fed98eae36380aa224746b2485p4@Lamp3
1.97e-51FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72259797..72259814, +
1.97e-51FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_d3f0d8fed98eae36380aa224746b2485p4@Lamp3
1.97e-51FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72263977..72263993, +
1.97e-51FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72264418..72264441, +
1.97e-51FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72264418..72264441, +
1.97e-51FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72264890..72264911, +
1.97e-51FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72263977..72263993, +
1.97e-51FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72264890..72264911, +
1.97e-51FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_d3f0d8fed98eae36380aa224746b2485p@chr14:70923240..70923251, -
1.97e-51FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_d3f0d8fed98eae36380aa224746b2485p@chr12:57376690..57376716, -
1.97e-51FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_d3f0d8fed98eae36380aa224746b2485p@chr6:72259797..72259814, +
1.97e-51FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_d3f0d8fed98eae36380aa224746b2485p@chr14:70923240..70923251, -
2.21e-51FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_17eae6d5b0999701f37aa9a3c08286dcp@chr6:72264609..72264653, -
2.21e-51FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_17eae6d5b0999701f37aa9a3c08286dcp@chr6:72264609..72264653, -
2.47e-51FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_01bc8eaf1fcc5e6db51459c64e60d799p@chr6:129378567..129378573, -
2.47e-51FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_01bc8eaf1fcc5e6db51459c64e60d799p@chr6:129378567..129378573, -
3.74e-51FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_753728d01f8d7b117679f7d29b4a8350p16@Pde5a
3.74e-51FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_753728d01f8d7b117679f7d29b4a8350p16@Pde5a
5.44e-51FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_1fcecf12249d0feb830874bce807e828p7@Nkx2-1
5.44e-51FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_1fcecf12249d0feb830874bce807e828p7@Nkx2-1
6.54e-51FFCP PHASE1:Mm9::chr17:67043399..67043410,-#_39dad7f36b17f30b03978913858348cfp9@Ptprm
6.54e-51FFCP PHASE1:Mm9::chr6:72260761..72260774,-#_39dad7f36b17f30b03978913858348cfp@chr6:72260761..72260774, -
6.54e-51FFCP PHASE2:Mm9::chr9:110959404..110959419,-#_39dad7f36b17f30b03978913858348cfp9@Ccrl2
6.54e-51FFCP PHASE2:Mm9::chr6:72260761..72260774,-#_39dad7f36b17f30b03978913858348cfp@chr6:72260761..72260774, -
6.54e-51FFCP PHASE2:Mm9::chr2:152591095..152591110,-#_39dad7f36b17f30b03978913858348cfp@chr2:152591095..152591110, -
6.54e-51FFCP PHASE2:Mm9::chr14:41951096..41951112,+#_39dad7f36b17f30b03978913858348cfp@chr14:41951096..41951112, +
6.54e-51FFCP PHASE1:Mm9::chr14:41951096..41951112,+#_39dad7f36b17f30b03978913858348cfp@chr14:41951096..41951112, +
6.54e-51FFCP PHASE1:Mm9::chr9:14522825..14522837,-#_39dad7f36b17f30b03978913858348cfp3@Piwil4
6.54e-51FFCP PHASE1:Mm9::chr16:19673260..19673277,-#_39dad7f36b17f30b03978913858348cfp@chr16:19673260..19673277, -
6.54e-51FFCP PHASE1:Mm9::chr12:57630433..57630438,-#_39dad7f36b17f30b03978913858348cfp6@E030019B13Rik
6.54e-51FFCP PHASE2:Mm9::chr6:72259749..72259765,+#_39dad7f36b17f30b03978913858348cfp@chr6:72259749..72259765, +
6.54e-51FFCP PHASE1:Mm9::chr5:28785382..28785394,-#_39dad7f36b17f30b03978913858348cfp@chr5:28785382..28785394, -
6.54e-51FFCP PHASE2:Mm9::chr16:19673260..19673277,-#_39dad7f36b17f30b03978913858348cfp@chr16:19673260..19673277, -
6.54e-51FFCP PHASE1:Mm9::chr14:41949922..41949935,+#_39dad7f36b17f30b03978913858348cfp@chr14:41949922..41949935, +