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UBERON:0006241

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Name:future spinal cord
Namespace:FANTOM
Xrefs:
links:

EFO:0003438
EHDAA2:0000674
EHDAA:898
EMAPA:16092
EMAPA:16525
EMAPA:16755
TAO:0000417

ZFA:0000417
Synonyms: "presumptive spinal cord" EXACT [ZFA:0000417]
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0001017(central nervous system)



Children NA

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006241 (future spinal cord), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.5e-145FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_d0ace6a835259f0761ab08022beaf259p2@RFX4
9.5e-145FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_d0ace6a835259f0761ab08022beaf259p2@RFX4
4.41e-144FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_e7387612498523e792095e9c77cfaf56p@chr5:87439352..87439386, -
4.41e-144FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_e7387612498523e792095e9c77cfaf56p@chr5:87439352..87439386, -
5.06e-144FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_05e39faec1db85829a71eeee861589d7p1@ENST00000412957
5.06e-144FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_05e39faec1db85829a71eeee861589d7p1@ENST00000412957
1.1e-143FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_66e4afa105aa25a5b3c07295dc786995p3@CTNND2
1.1e-143FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_66e4afa105aa25a5b3c07295dc786995p3@CTNND2
1.17e-142FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_6bb59cc830083fec148f6113a58e3b17p2@GABRG1
1.17e-142FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_6bb59cc830083fec148f6113a58e3b17p2@GABRG1
2.68e-142FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_9a6adfec952c694f0036c85fc0f2c53fp3@NRXN1
2.68e-142FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_9a6adfec952c694f0036c85fc0f2c53fp3@NRXN1
1.04e-141FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_3b864faeda0deff816410a2a1dc2b555p4@APC
1.04e-141FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_3b864faeda0deff816410a2a1dc2b555p4@APC
1.18e-141FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_b071175d191f5246091a38ca1a619950p8@CTNND2
1.18e-141FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_b071175d191f5246091a38ca1a619950p8@CTNND2
7.98e-141FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_059e474ba2ce1aaaa1b344114c3e6e49p7@DTNA
7.98e-141FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_059e474ba2ce1aaaa1b344114c3e6e49p7@DTNA
1.0e-140FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_c81184a662c149afa9bcc068131cbc7ep2@KCNJ16
1.0e-140FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_c81184a662c149afa9bcc068131cbc7ep2@KCNJ16
2.58e-140FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_7ba7b5fcaf6458dd6cc5dce865d73f54p@chr5:146314142..146314146, -
2.58e-140FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_7ba7b5fcaf6458dd6cc5dce865d73f54-, p@chr5:146314142..146314146
1.46e-139FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_e2321cfa49e7ae436b3e336865969e6cp1@RFX4
1.46e-139FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_e2321cfa49e7ae436b3e336865969e6cp1@RFX4
9.16e-139FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_2b2b64c9b286e179c86bfb2b7da3518ep4@RFX4
9.16e-139FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_2b2b64c9b286e179c86bfb2b7da3518ep4@RFX4
1.47e-138FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_aba9fde36137375faa2ee6c3ae0aff33p9@PRKACB
1.47e-138FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_aba9fde36137375faa2ee6c3ae0aff33p9@PRKACB
4.62e-138FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_03fddfcb0e51cfe3f8f5114b5ff64f25p2@CTNND2
4.62e-138FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_03fddfcb0e51cfe3f8f5114b5ff64f25p2@CTNND2
1.71e-137FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_69347512ebcbb0c17aac714842673cdfp@chr15:46702499..46702523, +
1.71e-137FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_69347512ebcbb0c17aac714842673cdfp@chr15:46702499..46702523, +
5.75e-137FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_0b4528be07a5f77ebe74b1f2bbfc5700p17@PRKACB
5.75e-137FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_0b4528be07a5f77ebe74b1f2bbfc5700p17@PRKACB
6.55e-137FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_77e0002e6e71dadf329df6cd9ce0e8e2p17@NTRK2
6.55e-137FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_77e0002e6e71dadf329df6cd9ce0e8e2p17@NTRK2
8.93e-137FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_708bbd3d9169236b2ce3a4770bf9eb15+, p@chr6:80131670..80131724
8.93e-137FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_708bbd3d9169236b2ce3a4770bf9eb15p@chr6:80131670..80131724, +
2.51e-136FFCP PHASE1:Hg19::chr11:35441048..35441059,-#_54b88a63576d45fef6aee7eb231cf8ecp4@SLC1A2
2.51e-136FFCP PHASE2:Hg19::chr11:35441048..35441059,-#_54b88a63576d45fef6aee7eb231cf8ecp4@SLC1A2
2.84e-136FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_6e259111142d2c6baf211ad914e76370p1@ATP10B
2.84e-136FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_6e259111142d2c6baf211ad914e76370p1@ATP10B
3.14e-136FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_a1458b517bb6efe336da2d82163b8e94p8@PRKCZ
3.14e-136FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_a1458b517bb6efe336da2d82163b8e94p8@PRKCZ
4.26e-136FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_04b42192b058cd24b013e3fbce2fe67dp9@GPM6B
4.26e-136FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_04b42192b058cd24b013e3fbce2fe67dp9@GPM6B
5.24e-136FFCP PHASE2:Hg19::chr18:24443122..24443142,-#_77df83b88976d215205b2e7e9637cb9cp5@AQP4
5.24e-136FFCP PHASE1:Hg19::chr18:24443122..24443142,-#_77df83b88976d215205b2e7e9637cb9cp5@AQP4
5.54e-136FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_0fed20630d2b6f27f46136357c3bbf90p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
5.54e-136FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_0fed20630d2b6f27f46136357c3bbf90p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
9.78e-136FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_7268d7a3ce93d15fa0483f85fb9455f2p8@DST
9.78e-136FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_7268d7a3ce93d15fa0483f85fb9455f2p8@DST
1.52e-135FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_c21087bb9ba15eec05a2b17258c38418-, p@chr7:47420733..47420758
1.52e-135FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_c21087bb9ba15eec05a2b17258c38418-, p@chr7:47420733..47420758
2.32e-135FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_805f4892475c2eac2a335e6c41c45d8dp1@ANKFN1
2.32e-135FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_805f4892475c2eac2a335e6c41c45d8dp1@ANKFN1
3.21e-135FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_6ac9ef817440c0abf7540963c2e1728ep1@GABRG1
3.21e-135FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_6ac9ef817440c0abf7540963c2e1728ep1@GABRG1
5.25e-135FFCP PHASE2:Hg19::chr17:7558857..7558903,+#_d733f837fd879051670daba4a4cada0cp@chr17:7558857..7558903, +
5.25e-135FFCP PHASE1:Hg19::chr17:7558857..7558903,+#_d733f837fd879051670daba4a4cada0cp@chr17:7558857..7558903, +
8.03e-135FFCP PHASE1:Hg19::chr2:73286253..73286279,-#_1e6211fa721e56c0f9f2b0f1c9c3ed70p3@SFXN5
8.03e-135FFCP PHASE2:Hg19::chr2:73286253..73286279,-#_1e6211fa721e56c0f9f2b0f1c9c3ed70p3@SFXN5
1.91e-134FFCP PHASE1:Hg19::chr4:46126093..46126106,-#_4f5ca4d5e8e6ecbccebcbc1092f20793p3@GABRG1
1.91e-134FFCP PHASE2:Hg19::chr4:46126093..46126106,-#_4f5ca4d5e8e6ecbccebcbc1092f20793p3@GABRG1
2.97e-134FFCP PHASE1:Hg19::chr18:32398400..32398416,+#_c4dddec17cc02af343b35a2d48cb3744p10@DTNA
2.97e-134FFCP PHASE2:Hg19::chr18:32398400..32398416,+#_c4dddec17cc02af343b35a2d48cb3744p10@DTNA
4.25e-134FFCP PHASE2:Hg19::chr18:32398372..32398394,+#_e0d303797db74d2067a05c3daf787803p5@DTNA
4.25e-134FFCP PHASE1:Hg19::chr18:32398372..32398394,+#_e0d303797db74d2067a05c3daf787803p5@DTNA
4.84e-134FFCP PHASE1:Hg19::chr17:42989121..42989166,-#_b44309b49d23267207386b7ca031dabbp7@GFAP
4.84e-134FFCP PHASE2:Hg19::chr17:42989121..42989166,-#_b44309b49d23267207386b7ca031dabbp7@GFAP
5.15e-134FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_d019695381f80e99f560764a29c5538bp2@PAQR6
5.15e-134FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_d019695381f80e99f560764a29c5538bp2@PAQR6
1.37e-133FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_cee58eb0b0a14e47e8339e916bedf62dp2@uc002fch.1
1.37e-133FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_cee58eb0b0a14e47e8339e916bedf62dp2@uc002fch.1
1.42e-133FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_6b1194f2539c3e27ac8e982ddf2c2152p2@SRCIN1
1.42e-133FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_6b1194f2539c3e27ac8e982ddf2c2152p2@SRCIN1
1.45e-133FFCP PHASE1:Hg19::chr3:153838982..153839001,-#_571a41c4e82923105ca4b0d44e39c2c5p4@ARHGEF26-AS1
1.45e-133FFCP PHASE2:Hg19::chr3:153838982..153839001,-#_571a41c4e82923105ca4b0d44e39c2c5p4@ARHGEF26-AS1
2.38e-133FFCP PHASE2:Hg19::chr12:41221684..41221704,+#_d3fc925ff704deb18f7ab92c952de03ap5@CNTN1
2.38e-133FFCP PHASE1:Hg19::chr12:41221684..41221704,+#_d3fc925ff704deb18f7ab92c952de03ap5@CNTN1
2.91e-133FFCP PHASE1:Hg19::chr5:11384929..11384947,-#_427cc2faad81143a2b4bfed08249598ap15@CTNND2
2.91e-133FFCP PHASE2:Hg19::chr5:11384929..11384947,-#_427cc2faad81143a2b4bfed08249598ap15@CTNND2
3.31e-133FFCP PHASE2:Hg19::chr12:57980138..57980165,+#_b5edcd6b757c4807c755b92b0aaa5a3ep3@KIF5A
3.31e-133FFCP PHASE1:Hg19::chr12:57980138..57980165,+#_b5edcd6b757c4807c755b92b0aaa5a3ep3@KIF5A
3.45e-133FFCP PHASE1:Hg19::chr1:110082487..110082535,+#_690b2ab59e3cf8779ad3b26429864ee6p1@GPR61
3.45e-133FFCP PHASE2:Hg19::chr1:110082487..110082535,+#_690b2ab59e3cf8779ad3b26429864ee6p1@GPR61
1.11e-132FFCP PHASE2:Hg19::chr8:63161215..63161235,+#_181d0085002de98556564570c6cf9010p5@NKAIN3
1.11e-132FFCP PHASE1:Hg19::chr8:63161215..63161235,+#_181d0085002de98556564570c6cf9010p5@NKAIN3
1.25e-132FFCP PHASE1:Hg19::chr15:30261066..30261096,-#_9cfe55dd28c41f267f7ca84bdaeaaffbp12@TJP1
1.25e-132FFCP PHASE2:Hg19::chr15:30261066..30261096,-#_9cfe55dd28c41f267f7ca84bdaeaaffbp12@TJP1
1.94e-132FFCP PHASE1:Hg19::chr17:7560542..7560578,+#_d7a679d048467beec047254cda6a0407p4@ATP1B2
1.94e-132FFCP PHASE2:Hg19::chr17:7560542..7560578,+#_d7a679d048467beec047254cda6a0407p4@ATP1B2
2.17e-132FFCP PHASE1:Hg19::chr7:29519599..29519612,+#_25c3041aba1b3080ddf4667e12ee763bp9@CHN2
2.17e-132FFCP PHASE2:Hg19::chr7:29519599..29519612,+#_25c3041aba1b3080ddf4667e12ee763bp9@CHN2
2.85e-132FFCP PHASE1:Hg19::chr12:102060112..102060135,+#_d28f917e9cbecabe4985e06782b9281ap4@MYBPC1
2.85e-132FFCP PHASE2:Hg19::chr12:102060112..102060135,+#_d28f917e9cbecabe4985e06782b9281ap4@MYBPC1
3.19e-132FFCP PHASE2:Hg19::chr5:87437100..87437115,-#_8e41889d5f69a6005c39d857f316edccp1@LOC100289347
3.19e-132FFCP PHASE1:Hg19::chr5:87437100..87437115,-#_8e41889d5f69a6005c39d857f316edccp1@LOC100289347
4.04e-132FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_acb9fa3aa607c83413c77f634b6cabdcp9@MAP2
4.04e-132FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_acb9fa3aa607c83413c77f634b6cabdcp9@MAP2