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UBERON:0006947

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Name:male genital duct
Namespace:FANTOM
Definition:"A duct or series of ducts that transports sperm from the gonad. In mammals this is from the seminiferous tubules through rete testis, vas efferentia, epididymis, vas deferens, ejeculatory duct to the urethra." [UBERON:cjm]
Xrefs:
links:

FMA:55678
TAO:0001268

ZFA:0001268
Synonyms: "sperm duct" EXACT [ZFA:0001268]
Comments:Taxon notes: we use this as a generic grouping class for a number of taxa. AO notes: in FMA includes as parts: seminal vesicle, efferent ductule (vas efferentia), epididymis, deferent duct (vas deferens), ejaculatory duct
Alt_id: UBERON:0010140
Subset: grouping_class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005904(duct of male reproductive system),UBERON:0015212(lateral structure)
part_of:UBERON:0004054(internal male genitalia)



Children

part of:UBERON:0001000 (vas deferens),UBERON:0001301 (epididymis),UBERON:0006868 (seminal fluid secreting gland)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006947 (male genital duct), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.79e-195FFCP PHASE1:Hg19::chr14:21214091..21214097,+#_adb36d4669ab3729bbe71f3a485c7abbp3@EDDM3A
2.79e-195FFCP PHASE1:Hg19::chr11:125618495..125618517,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618495..125618517, +
2.79e-195FFCP PHASE1:Hg19::chr11:69950851..69950887,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:69950851..69950887, +
2.79e-195FFCP PHASE2:Hg19::chr9:138555154..138555159,+#_adb36d4669ab3729bbe71f3a485c7abbp1@LCN9
2.79e-195FFCP PHASE2:Hg19::chr11:125618661..125618677,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618661..125618677, +
2.79e-195FFCP PHASE2:Hg19::chr14:21213984..21213993,+#_adb36d4669ab3729bbe71f3a485c7abbp2@EDDM3A
2.79e-195FFCP PHASE1:Hg19::chr11:125618661..125618677,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618661..125618677, +
2.79e-195FFCP PHASE2:Hg19::chr3:140961228..140961237,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr3:140961228..140961237, +
2.79e-195FFCP PHASE2:Hg19::chr11:125618739..125618756,-#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618739..125618756, -
2.79e-195FFCP PHASE2:Hg19::chr11:69950851..69950887,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:69950851..69950887, +
2.79e-195FFCP PHASE1:Hg19::chr3:140961228..140961237,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr3:140961228..140961237, +
2.79e-195FFCP PHASE1:Hg19::chr11:125618739..125618756,-#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618739..125618756, -
2.79e-195FFCP PHASE2:Hg19::chr11:125617607..125617617,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125617607..125617617, +
2.79e-195FFCP PHASE1:Hg19::chr14:105935020..105935028,-#_adb36d4669ab3729bbe71f3a485c7abbp@chr14:105935020..105935028, -
2.79e-195FFCP PHASE1:Hg19::chr11:69951723..69951737,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:69951723..69951737, +
2.79e-195FFCP PHASE1:Hg19::chr15:25165150..25165161,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr15:25165150..25165161, +
2.79e-195FFCP PHASE1:Hg19::chr14:21213984..21213993,+#_adb36d4669ab3729bbe71f3a485c7abbp2@EDDM3A
2.79e-195FFCP PHASE2:Hg19::chr11:125648641..125648646,-#_adb36d4669ab3729bbe71f3a485c7abbp2@PATE2
2.79e-195FFCP PHASE1:Hg19::chr11:125617607..125617617,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125617607..125617617, +
2.79e-195FFCP PHASE2:Hg19::chrX:112044378..112044412,-#_adb36d4669ab3729bbe71f3a485c7abbp@chrX:112044378..112044412, -
2.79e-195FFCP PHASE2:Hg19::chr14:21214091..21214097,+#_adb36d4669ab3729bbe71f3a485c7abbp3@EDDM3A
2.79e-195FFCP PHASE1:Hg19::chrX:112044378..112044412,-#_adb36d4669ab3729bbe71f3a485c7abbp@chrX:112044378..112044412, -
2.79e-195FFCP PHASE2:Hg19::chr15:25165150..25165161,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr15:25165150..25165161, +
2.79e-195FFCP PHASE1:Hg19::chr11:125648641..125648646,-#_adb36d4669ab3729bbe71f3a485c7abbp2@PATE2
2.79e-195FFCP PHASE2:Hg19::chr11:125617636..125617646,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125617636..125617646, +
2.79e-195FFCP PHASE1:Hg19::chr9:138555154..138555159,+#_adb36d4669ab3729bbe71f3a485c7abbp1@LCN9
2.79e-195FFCP PHASE2:Hg19::chr14:105935020..105935028,-#_adb36d4669ab3729bbe71f3a485c7abbp@chr14:105935020..105935028, -
2.79e-195FFCP PHASE2:Hg19::chr11:125648685..125648688,-#_adb36d4669ab3729bbe71f3a485c7abbp3@PATE2
2.79e-195FFCP PHASE1:Hg19::chr11:125617636..125617646,+#_adb36d4669ab3729bbe71f3a485c7abb+, p@chr11:125617636..125617646
2.79e-195FFCP PHASE2:Hg19::chr11:125616184..125616201,+#_adb36d4669ab3729bbe71f3a485c7abbp2@PATE1
2.79e-195FFCP PHASE2:Hg19::chr11:69951723..69951737,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:69951723..69951737, +
2.79e-195FFCP PHASE1:Hg19::chr11:125648685..125648688,-#_adb36d4669ab3729bbe71f3a485c7abbp3@PATE2
2.79e-195FFCP PHASE2:Hg19::chr11:125618495..125618517,+#_adb36d4669ab3729bbe71f3a485c7abbp@chr11:125618495..125618517, +
2.79e-195FFCP PHASE1:Hg19::chr11:125616184..125616201,+#_adb36d4669ab3729bbe71f3a485c7abbp2@PATE1
3.27e-147FFCP PHASE1:Hg19::chr7:25702669..25702678,-#_a8f659f2ac68083c30d3dc01096eb48fp4@ENST00000446840, p4@uc003sxp.1
3.27e-147FFCP PHASE1:Hg19::chr16:2126158..2126172,+#_a8f659f2ac68083c30d3dc01096eb48fp9@TSC2
3.27e-147FFCP PHASE2:Hg19::chr10:114094924..114094935,-#_a8f659f2ac68083c30d3dc01096eb48fp@chr10:114094924..114094935, -
3.27e-147FFCP PHASE2:Hg19::chr16:2126158..2126172,+#_a8f659f2ac68083c30d3dc01096eb48fp9@TSC2
3.27e-147FFCP PHASE2:Hg19::chr7:25702669..25702678,-#_a8f659f2ac68083c30d3dc01096eb48fp4@ENST00000446840, p4@uc003sxp.1
3.27e-147FFCP PHASE1:Hg19::chr11:69951071..69951079,+#_a8f659f2ac68083c30d3dc01096eb48fp@chr11:69951071..69951079, +
3.27e-147FFCP PHASE2:Hg19::chr14:21214039..21214057,+#_a8f659f2ac68083c30d3dc01096eb48fp1@EDDM3A
3.27e-147FFCP PHASE2:Hg19::chr11:69951071..69951079,+#_a8f659f2ac68083c30d3dc01096eb48fp@chr11:69951071..69951079, +
3.27e-147FFCP PHASE2:Hg19::chr10:119307515..119307518,+#_a8f659f2ac68083c30d3dc01096eb48fp23@EMX2
3.27e-147FFCP PHASE1:Hg19::chr11:92922903..92922918,+#_a8f659f2ac68083c30d3dc01096eb48fp@chr11:92922903..92922918, +
3.27e-147FFCP PHASE1:Hg19::chr10:114094924..114094935,-#_a8f659f2ac68083c30d3dc01096eb48fp@chr10:114094924..114094935, -
3.27e-147FFCP PHASE1:Hg19::chr14:21214039..21214057,+#_a8f659f2ac68083c30d3dc01096eb48fp1@EDDM3A
3.27e-147FFCP PHASE2:Hg19::chr11:92922903..92922918,+#_a8f659f2ac68083c30d3dc01096eb48fp@chr11:92922903..92922918, +
3.27e-147FFCP PHASE1:Hg19::chr10:119307515..119307518,+#_a8f659f2ac68083c30d3dc01096eb48fp23@EMX2
5.41e-147FFCP PHASE2:Hg19::chr11:69950033..69950046,+#_edbe3ef02773caa7a4679e3795099f3fp11@ANO1
5.41e-147FFCP PHASE2:Hg19::chr15:64423864..64423884,+#_edbe3ef02773caa7a4679e3795099f3fp8@SNX1
5.41e-147FFCP PHASE2:Hg19::chr17:59475447..59475455,+#_edbe3ef02773caa7a4679e3795099f3fp@chr17:59475447..59475455, +
5.41e-147FFCP PHASE1:Hg19::chr17:59475447..59475455,+#_edbe3ef02773caa7a4679e3795099f3fp@chr17:59475447..59475455, +
5.41e-147FFCP PHASE1:Hg19::chr15:64423864..64423884,+#_edbe3ef02773caa7a4679e3795099f3fp8@SNX1
5.41e-147FFCP PHASE2:Hg19::chr11:125706033..125706038,+#_edbe3ef02773caa7a4679e3795099f3fp@chr11:125706033..125706038, +
5.41e-147FFCP PHASE1:Hg19::chr11:125706033..125706038,+#_edbe3ef02773caa7a4679e3795099f3fp@chr11:125706033..125706038, +
5.41e-147FFCP PHASE1:Hg19::chr11:69950033..69950046,+#_edbe3ef02773caa7a4679e3795099f3fp11@ANO1
8.93e-147FFCP PHASE1:Hg19::chr10:102505147..102505162,+#_5f425a27b68e2f71bef962ac178da169p9@PAX2
8.93e-147FFCP PHASE2:Hg19::chr10:102505147..102505162,+#_5f425a27b68e2f71bef962ac178da169p9@PAX2
8.93e-147FFCP PHASE1:Hg19::chr2:87985242..87985251,-#_5f425a27b68e2f71bef962ac178da169p@chr2:87985242..87985251, -
8.93e-147FFCP PHASE2:Hg19::chr2:87985242..87985251,-#_5f425a27b68e2f71bef962ac178da169p@chr2:87985242..87985251, -
1.47e-146FFCP PHASE1:Hg19::chr3:107201385..107201388,-#_dac6ac1d8758c7a85c89858384e45f8dp@chr3:107201385..107201388, -
1.47e-146FFCP PHASE2:Hg19::chr3:107201385..107201388,-#_dac6ac1d8758c7a85c89858384e45f8dp@chr3:107201385..107201388, -
8.98e-131FFCP PHASE2:Hg19::chr19:15728999..15729014,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15728999..15729014, +
8.98e-131FFCP PHASE1:Hg19::chr20:43850628..43850633,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850628..43850633, +
8.98e-131FFCP PHASE2:Hg19::chr19:15732081..15732088,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15732081..15732088, +
8.98e-131FFCP PHASE2:Hg19::chr20:43850664..43850675,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850664..43850675, +
8.98e-131FFCP PHASE1:Hg19::chr20:123193..123198,+#_63fbf71a93de793951981a83aabd5ccdp2@DEFB126
8.98e-131FFCP PHASE1:Hg19::chr8:142335166..142335176,+#_63fbf71a93de793951981a83aabd5ccdp@chr8:142335166..142335176, +
8.98e-131FFCP PHASE1:Hg19::chr20:43851747..43851752,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851747..43851752, +
8.98e-131FFCP PHASE2:Hg19::chr20:43851878..43851883,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851878..43851883, +
8.98e-131FFCP PHASE1:Hg19::chr20:43836755..43836769,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43836755..43836769, +
8.98e-131FFCP PHASE2:Hg19::chr15:91849918..91849931,+#_63fbf71a93de793951981a83aabd5ccdp@chr15:91849918..91849931, +
8.98e-131FFCP PHASE2:Hg19::chr7:20655284..20655295,+#_63fbf71a93de793951981a83aabd5ccdp5@ABCB5
8.98e-131FFCP PHASE1:Hg19::chr11:125657984..125657989,+#_63fbf71a93de793951981a83aabd5ccdp5@PATE3
8.98e-131FFCP PHASE2:Hg19::chr20:43836912..43836919,-#_63fbf71a93de793951981a83aabd5ccdp@chr20:43836912..43836919, -
8.98e-131FFCP PHASE1:Hg19::chr20:43850370..43850384,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850370..43850384, +
8.98e-131FFCP PHASE1:Hg19::chr19:15734133..15734157,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15734133..15734157, +
8.98e-131FFCP PHASE2:Hg19::chr20:43850436..43850444,-#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850436..43850444, -
8.98e-131FFCP PHASE2:Hg19::chr11:1013442..1013453,-#_63fbf71a93de793951981a83aabd5ccdp@chr11:1013442..1013453, -
8.98e-131FFCP PHASE2:Hg19::chr2:223648293..223648295,+#_63fbf71a93de793951981a83aabd5ccdp@chr2:223648293..223648295, +
8.98e-131FFCP PHASE1:Hg19::chr20:43851422..43851430,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851422..43851430, +
8.98e-131FFCP PHASE2:Hg19::chr20:43851492..43851518,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851492..43851518, +
8.98e-131FFCP PHASE1:Hg19::chr20:43837304..43837314,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43837304..43837314, +
8.98e-131FFCP PHASE1:Hg19::chr19:15730135..15730149,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15730135..15730149, +
8.98e-131FFCP PHASE2:Hg19::chr13:90858329..90858339,-#_63fbf71a93de793951981a83aabd5ccdp@chr13:90858329..90858339, -
8.98e-131FFCP PHASE2:Hg19::chr20:43838283..43838286,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43838283..43838286, +
8.98e-131FFCP PHASE1:Hg19::chr12:126515178..126515204,+#_63fbf71a93de793951981a83aabd5ccdp@chr12:126515178..126515204, +
8.98e-131FFCP PHASE1:Hg19::chr20:43851095..43851098,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851095..43851098, +
8.98e-131FFCP PHASE2:Hg19::chr20:43851172..43851181,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43851172..43851181, +
8.98e-131FFCP PHASE1:Hg19::chr20:43836287..43836295,-#_63fbf71a93de793951981a83aabd5ccdp@chr20:43836287..43836295, -
8.98e-131FFCP PHASE2:Hg19::chr11:69954393..69954400,-#_63fbf71a93de793951981a83aabd5ccdp@chr11:69954393..69954400, -
8.98e-131FFCP PHASE1:Hg19::chr1:182369766..182369777,-#_63fbf71a93de793951981a83aabd5ccdp1@TEDDM1
8.98e-131FFCP PHASE1:Hg19::chr20:43853046..43853053,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43853046..43853053, +
8.98e-131FFCP PHASE2:Hg19::chr20:43837135..43837167,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43837135..43837167, +
8.98e-131FFCP PHASE2:Hg19::chr19:15730135..15730149,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15730135..15730149, +
8.98e-131FFCP PHASE1:Hg19::chr20:43850750..43850755,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850750..43850755, +
8.98e-131FFCP PHASE1:Hg19::chr20:43835380..43835384,+#_63fbf71a93de793951981a83aabd5ccdp2@SEMG1, p3@SEMG2
8.98e-131FFCP PHASE2:Hg19::chr19:15733422..15733428,+#_63fbf71a93de793951981a83aabd5ccdp@chr19:15733422..15733428, +
8.98e-131FFCP PHASE2:Hg19::chr20:43850844..43850864,+#_63fbf71a93de793951981a83aabd5ccdp@chr20:43850844..43850864, +
8.98e-131FFCP PHASE1:Hg19::chr5:179511281..179511283,+#_63fbf71a93de793951981a83aabd5ccdp@chr5:179511281..179511283, +