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UBERON:0009773

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Name:renal tubule
Namespace:FANTOM
Definition:"A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis." [GO:0061333, GOC:dph, GOC:mtg_kidney_jan10]
Synonyms: "renal tubule (generic)" EXACT [UBERON:cjm]
"tubule of excretory system" EXACT [OBOL:automatic, UBERON:cjm]
Subset: grouping_class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0006555(excretory tube)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0001231 (nephron tubule)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009773 (renal tubule), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.05e-87FFCP PHASE1:Hg19::chr2:693380..693398,+#_ed32da53e975f90ddf85dbdec5fab8d6p@chr2:693380..693398, +
1.05e-87FFCP PHASE2:Hg19::chr2:693380..693398,+#_ed32da53e975f90ddf85dbdec5fab8d6p@chr2:693380..693398, +
1.72e-83FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5369f4516fe0b23a09f6e08324bd9404p4@MEGF11
1.72e-83FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5369f4516fe0b23a09f6e08324bd9404p4@MEGF11
2.2e-74FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_a1d73e4b29ded95b5cede6da63d4ddd0p7@HOXA10
2.2e-74FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_a1d73e4b29ded95b5cede6da63d4ddd0p7@HOXA10
7.63e-66FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_f16efae389bca4031b8ea7d13e9a80e8p@chr1:1100457..1100470, +
7.63e-66FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_f16efae389bca4031b8ea7d13e9a80e8p@chr1:1100457..1100470, +
6.44e-62FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_333b4f1c8027b8e2cd09ffb5909aad67p4@PAX2
6.44e-62FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_333b4f1c8027b8e2cd09ffb5909aad67p4@PAX2
5.84e-60FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_d8cb4aaddbe9f88c3f54a3cc452d52edp@chr18:3456189..3456200, +
5.84e-60FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_d8cb4aaddbe9f88c3f54a3cc452d52edp@chr18:3456189..3456200, +
6.18e-60FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_84528ad193f3d41939899ddc0f53f3e4p3@PAX2
6.18e-60FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_84528ad193f3d41939899ddc0f53f3e4p3@PAX2
4.45e-59FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_46b83b2838af4d63a1a877f59de47756p6@LRRN4
4.45e-59FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_46b83b2838af4d63a1a877f59de47756p6@LRRN4
3.49e-58FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_f4820d0946c534d206fe4bdee17e41d4p@chr5:74244100..74244117, +
3.49e-58FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_f4820d0946c534d206fe4bdee17e41d4p@chr5:74244100..74244117, +
3.91e-56FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_4c7a7068a3a6f0b40e4b8284ddf16655p2@AB527789
3.91e-56FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_4c7a7068a3a6f0b40e4b8284ddf16655p2@AB527789
3.83e-55FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_f70b0fc3d640b9b0c944cce76816f16cp@chr16:86604624..86604648, +
3.83e-55FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_f70b0fc3d640b9b0c944cce76816f16cp@chr16:86604624..86604648, +
3.51e-54FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_3ef965506cdf402c3d15aa488cc699bap@chr16:86768403..86768437, +
3.51e-54FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_3ef965506cdf402c3d15aa488cc699bap@chr16:86768403..86768437, +
6.09e-53FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_bd9528d5138d577b1a507bb6734c6111p2@CLDN6
6.09e-53FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_bd9528d5138d577b1a507bb6734c6111p2@CLDN6
2.79e-52FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_f15aae7a40b83ff3683873b2a5f5f54fp1@ENST00000418041, p1@ENST00000443104
2.79e-52FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_f15aae7a40b83ff3683873b2a5f5f54fp1@ENST00000418041, p1@ENST00000443104
1.61e-50FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_c4121a4957a3ac56c11fe8f15de10a71p@chr7:7606139..7606151, -
1.61e-50FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_c4121a4957a3ac56c11fe8f15de10a71p@chr7:7606139..7606151, -
1.96e-50FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_309c911905a7ba9f8878d0953db65b8fp3@HNF1B
1.96e-50FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_309c911905a7ba9f8878d0953db65b8fp3@HNF1B
1.73e-49FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_375c92c40e83c5bf501c4fccb4c437c7p@chr7:140227349..140227360, -
1.73e-49FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_375c92c40e83c5bf501c4fccb4c437c7p@chr7:140227349..140227360, -
2.61e-49FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_88e41a9ac721db107200f78cec171415p16@HOXA10
2.61e-49FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_88e41a9ac721db107200f78cec171415p16@HOXA10
3.13e-49FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_a6c70e026514c7979da256bb5db20fbcp2@B3GALT5
3.13e-49FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_a6c70e026514c7979da256bb5db20fbcp2@B3GALT5
4.07e-49FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_997636dc68846103428b3e782f0b06c8p4@AIF1L
4.07e-49FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_997636dc68846103428b3e782f0b06c8p4@AIF1L
1.12e-47FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_6cae71500f959d1cb03a49779ee09cc7p@chr7:140227303..140227330, -
1.12e-47FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_6cae71500f959d1cb03a49779ee09cc7p@chr7:140227303..140227330, -
1.23e-44FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_9e3137ed919a4531e0312cf4f796d39ep3@LRRN4
1.23e-44FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_9e3137ed919a4531e0312cf4f796d39ep3@LRRN4
3.62e-44FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_979585bfa3ec934548d8b4ada87d3be1p@chr21:46826248..46826282, -
3.62e-44FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_979585bfa3ec934548d8b4ada87d3be1p@chr21:46826248..46826282, -
3.06e-43FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_36507fbdf4aac97cde23684f3c5a8ed7p2@LRRN4
3.06e-43FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_36507fbdf4aac97cde23684f3c5a8ed7p2@LRRN4
1.81e-42FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_25c888b5e27d30134084d522992b82dcp@chr15:85403302..85403304, +
1.81e-42FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_25c888b5e27d30134084d522992b82dcp@chr15:85403302..85403304, +
1.82e-42FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_5c607d8ee2b6292fac5059d8885f2793p@chr7:98453821..98453843, -
1.82e-42FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_5c607d8ee2b6292fac5059d8885f2793-, p@chr7:98453821..98453843
2.77e-42FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_ab4fe2d3fff2475ff33c96c049e7ee20p7@LRRN4
2.77e-42FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_ab4fe2d3fff2475ff33c96c049e7ee20p7@LRRN4
7.5e-42FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_879c202bb6a72cef3f8c9f4f1dd3060dp2@PAX2
7.5e-42FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_879c202bb6a72cef3f8c9f4f1dd3060dp2@PAX2
3.59e-41FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_5b7113a5ec5096b5c643b318569153aap16@TJP2
3.59e-41FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_5b7113a5ec5096b5c643b318569153aap16@TJP2
9.39e-41FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_c4bccc7984a3614caf45af9f3e2712f3p1@ENST00000413103
9.39e-41FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_c4bccc7984a3614caf45af9f3e2712f3p1@ENST00000413103
1.7e-40FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_0a4647f6510805c3e9f55df468c0be6cp5@LRRN4
1.7e-40FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_0a4647f6510805c3e9f55df468c0be6cp5@LRRN4
2.9e-40FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_457ca0167e83ae65266ab3e665cd1440p2@PLA2G2F
2.9e-40FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_457ca0167e83ae65266ab3e665cd1440p2@PLA2G2F
8.58e-40FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_470ac077380ba85164cc2e310a6d24a9p3@AIF1L
8.58e-40FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_470ac077380ba85164cc2e310a6d24a9p3@AIF1L
1.21e-39FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_6e9464182d0eadbc594814bbeb88726cp6@GALNT14
1.21e-39FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_6e9464182d0eadbc594814bbeb88726cp6@GALNT14
3.08e-39FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_f49e0ba6b94c99ad1a8ba73605ecca5bp4@AB527789
3.08e-39FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_f49e0ba6b94c99ad1a8ba73605ecca5bp4@AB527789
7.42e-37FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_8345b7c8cba65adfe8e1c95432c12a3ep4@DCDC2
7.42e-37FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_8345b7c8cba65adfe8e1c95432c12a3ep4@DCDC2
1.29e-36FFCP PHASE2:Hg19::chr2:693362..693373,+#_e55efcc4c0fad5763da77f7700713006p@chr2:693362..693373, +
1.29e-36FFCP PHASE1:Hg19::chr2:693362..693373,+#_e55efcc4c0fad5763da77f7700713006p@chr2:693362..693373, +
1.36e-36FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_9891adae8391118c76109b59d7ccb230p1@HOXD4
1.36e-36FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_9891adae8391118c76109b59d7ccb230p1@HOXD4
6.21e-36FFCP PHASE1:Hg19::chr2:176982078..176982095,+#_588d0324b905f309263846dd84e0477ep@chr2:176982078..176982095, +
6.21e-36FFCP PHASE2:Hg19::chr2:176982078..176982095,+#_588d0324b905f309263846dd84e0477ep@chr2:176982078..176982095, +
2.64e-35FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_1da0fdbec5d346dc00d5e03b5b382b18p1@AB527789
2.64e-35FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_1da0fdbec5d346dc00d5e03b5b382b18p1@AB527789
3.85e-35FFCP PHASE1:Hg19::chr2:108994466..108994485,+#_97380d04d0d3b58a2c035c8bfce4beeap3@SULT1C4
3.85e-35FFCP PHASE2:Hg19::chr2:108994466..108994485,+#_97380d04d0d3b58a2c035c8bfce4beeap3@SULT1C4
8.14e-35FFCP PHASE1:Hg19::chr18:43405633..43405645,+#_494657ccca4a6105e70860b67eb1052ep4@SIGLEC15
8.14e-35FFCP PHASE2:Hg19::chr18:43405633..43405645,+#_494657ccca4a6105e70860b67eb1052ep4@SIGLEC15
1.65e-34FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_5fe4a6a35e2dbbf94ae918606b09c65ep1@ENST00000444849
1.65e-34FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_5fe4a6a35e2dbbf94ae918606b09c65ep1@ENST00000444849
1.14e-33FFCP PHASE2:Hg19::chr17:171147..171161,+#_46f09b8debe74cb09767a71fd8256159p@chr17:171147..171161, +
1.14e-33FFCP PHASE1:Hg19::chr17:171147..171161,+#_46f09b8debe74cb09767a71fd8256159p@chr17:171147..171161, +
1.52e-33FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_08e74c46484fb1c54b85b0100dce2d5bp2@C14orf105
1.52e-33FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_08e74c46484fb1c54b85b0100dce2d5bp2@C14orf105
1.8e-33FFCP PHASE2:Hg19::chr2:31361543..31361564,-#_a6be7f28fa1e99db4b816ebf7d973f6dp5@GALNT14
1.8e-33FFCP PHASE1:Hg19::chr2:31361543..31361564,-#_a6be7f28fa1e99db4b816ebf7d973f6dp5@GALNT14
2.35e-33FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_e8c732358c84713fdef069b809d01e84p1@CLDN16
2.35e-33FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_e8c732358c84713fdef069b809d01e84p1@CLDN16
4.12e-33FFCP PHASE1:Hg19::chr17:36065029..36065045,-#_e999852945cdc0bbd8aa74317faf74f0p@chr17:36065029..36065045, -
4.12e-33FFCP PHASE2:Hg19::chr17:36065029..36065045,-#_e999852945cdc0bbd8aa74317faf74f0p@chr17:36065029..36065045, -
8.12e-33FFCP PHASE1:Hg19::chr17:35293950..35293973,-#_d44f6e43dee13235e95e7db6eb48048ep1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
8.12e-33FFCP PHASE2:Hg19::chr17:35293950..35293973,-#_d44f6e43dee13235e95e7db6eb48048ep1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
1.25e-32FFCP PHASE1:Hg19::chr22:30653574..30653606,-#_16773cd93ca0d19cee46a899739a44d0p@chr22:30653574..30653606, -
1.25e-32FFCP PHASE2:Hg19::chr22:30653574..30653606,-#_16773cd93ca0d19cee46a899739a44d0p@chr22:30653574..30653606, -