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UBERON:0000970

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Name:eye
Definition:"organ that detects light" UBERON:cjm, Wikipedia:Eye
Xrefs:
links:

AAO:0010340
BILA:0000017
BTO:0000439
EFO:0000827
EMAPA:16198
EV:0100336
GAID:69
MAT:0000140
MESH:A.01.456.505.420
MIAA:0000140
OpenCyc:Mx4rvViTvpwpEbGdrcN5Y29ycA
SCTID:244486005
TGMA:0000024

VHOG:0000275
Synonyms: "visual apparatus" RELATED [EV:0100336]
Alt_id: UBERON:FBbt_00004508-FMA_54448-MA_0000261-MIAA_0000140-XAO_0000179-ZFA_0000107
Subset: functional_classification
major_organ
organ_slim
uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000020(sense organ)
part_of:UBERON:0002104(visual system)



Children

is a:UBERON:0000047 (simple eye)
part of:UBERON:0005388 (photoreceptor array),UBERON:0005389 (transparent eye structure),UBERON:0007625 (pigment epithelium of eye),FF:0010054 (human eye - fetal sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000970 (eye), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.31e-86FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr10:127668442..127668453, +
1.31e-86FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31817987..31818013, +
1.31e-86FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_6ebe97cbb151b6a21ff99eebc0683341p8@Osbp2
1.31e-86FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31815126..31815139, -
1.31e-86FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr11:77532283..77532316, -
1.31e-86FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31817987..31818013, +
1.31e-86FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31818263..31818276, +
1.31e-86FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_6ebe97cbb151b6a21ff99eebc0683341p1@E130218I03Rik
1.31e-86FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_6ebe97cbb151b6a21ff99eebc0683341p6@Celf1
1.31e-86FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr10:127668442..127668453, +
1.31e-86FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr11:77532391..77532408, -
1.31e-86FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_6ebe97cbb151b6a21ff99eebc0683341p8@Osbp2
1.31e-86FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_6ebe97cbb151b6a21ff99eebc0683341p3@Osbp2
1.31e-86FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31818263..31818276, +
1.31e-86FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr3:129525389..129525400, -
1.31e-86FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_6ebe97cbb151b6a21ff99eebc0683341p6@Celf1
1.31e-86FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr11:77532391..77532408, -
1.31e-86FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31818106..31818119, +
1.31e-86FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31818106..31818119, +
1.31e-86FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr11:77532283..77532316, -
1.31e-86FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_6ebe97cbb151b6a21ff99eebc0683341p1@E130218I03Rik
1.31e-86FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_6ebe97cbb151b6a21ff99eebc0683341p1@Mir184
1.31e-86FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_6ebe97cbb151b6a21ff99eebc0683341p1@Mir184
1.31e-86FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr3:129525389..129525400, -
1.31e-86FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_6ebe97cbb151b6a21ff99eebc0683341p3@Osbp2
1.31e-86FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr17:31815126..31815139, -
1.31e-86FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_6ebe97cbb151b6a21ff99eebc0683341p@chr16:21743134..21743139, -
1.31e-86FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_6ebe97cbb151b6a21ff99eebc0683341-, p@chr16:21743134..21743139
1.31e-86FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_6ebe97cbb151b6a21ff99eebc0683341p4@Dct
1.31e-86FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_6ebe97cbb151b6a21ff99eebc0683341p5@Zfp365
1.31e-86FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_6ebe97cbb151b6a21ff99eebc0683341p5@Zfp365
1.31e-86FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_6ebe97cbb151b6a21ff99eebc0683341p4@Dct
3.94e-79FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_48d94ef5e848a5ad5e6f5129a7550e88p10@SIX3
3.94e-79FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_48d94ef5e848a5ad5e6f5129a7550e88p10@SIX3
2.3e-78FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_6f5b0954fbf777ea9de596bcf7b09d5fp@chr7:64675015..64675028, +
2.3e-78FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_6f5b0954fbf777ea9de596bcf7b09d5fp3@LOC100504989, p3@Timeless
2.3e-78FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_6f5b0954fbf777ea9de596bcf7b09d5fp3@LOC100504989, p3@Timeless
2.3e-78FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_6f5b0954fbf777ea9de596bcf7b09d5fp@chr7:64675015..64675028, +
2.82e-78FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_55ed5a199a03b1abe53b1814bd42b045p@chr6:97891135..97891147, +
2.82e-78FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_55ed5a199a03b1abe53b1814bd42b045p6@Pax6
2.82e-78FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_55ed5a199a03b1abe53b1814bd42b045p6@Pax6
2.82e-78FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_55ed5a199a03b1abe53b1814bd42b045p@chr6:97891135..97891147, +
3.46e-78FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_413ad474d5e4eb080d4e367ec0497437p1@4933429O19Rik
3.46e-78FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_413ad474d5e4eb080d4e367ec0497437p1@4933429O19Rik
4.97e-77FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_8c68c2ad39b4567974f60f2741579a91p1@Impg2
4.97e-77FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_8c68c2ad39b4567974f60f2741579a91p@chr17:31817947..31817965, +
4.97e-77FFCP PHASE1:Mm9::chr5:112690744..112690755,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112690744..112690755, +
4.97e-77FFCP PHASE2:Mm9::chr5:112691047..112691066,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112691047..112691066, +
4.97e-77FFCP PHASE1:Mm9::chr10:127668799..127668810,+#_8c68c2ad39b4567974f60f2741579a91p5@LOC100504989, p5@Timeless
4.97e-77FFCP PHASE2:Mm9::chr7:29477874..29477889,+#_8c68c2ad39b4567974f60f2741579a91p6@Fbxo27
4.97e-77FFCP PHASE1:Mm9::chr1:152166537..152166579,+#_8c68c2ad39b4567974f60f2741579a91p1@Pdc
4.97e-77FFCP PHASE1:Mm9::chr3:129525405..129525428,-#_8c68c2ad39b4567974f60f2741579a91p1@Rrh
4.97e-77FFCP PHASE1:Mm9::chr10:93761330..93761358,-#_8c68c2ad39b4567974f60f2741579a91p1@Gm4792
4.97e-77FFCP PHASE2:Mm9::chr10:93761330..93761358,-#_8c68c2ad39b4567974f60f2741579a91p1@Gm4792
4.97e-77FFCP PHASE2:Mm9::chr8:77582194..77582219,+#_8c68c2ad39b4567974f60f2741579a91p@chr8:77582194..77582219, +
4.97e-77FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_8c68c2ad39b4567974f60f2741579a91p@chr1:65147224..65147236, -
4.97e-77FFCP PHASE1:Mm9::chr6:115162924..115162933,+#_8c68c2ad39b4567974f60f2741579a91p@chr6:115162924..115162933, +
4.97e-77FFCP PHASE2:Mm9::chr5:112686483..112686494,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112686483..112686494, +
4.97e-77FFCP PHASE1:Mm9::chr5:113506006..113506025,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:113506006..113506025, -
4.97e-77FFCP PHASE1:Mm9::chr15:36655026..36655032,+#_8c68c2ad39b4567974f60f2741579a91p@chr15:36655026..36655032, +
4.97e-77FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_8c68c2ad39b4567974f60f2741579a91p@chr17:31818629..31818644, +
4.97e-77FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_8c68c2ad39b4567974f60f2741579a91p@chr8:77582172..77582183, +
4.97e-77FFCP PHASE2:Mm9::chr3:129525452..129525463,-#_8c68c2ad39b4567974f60f2741579a91p3@Rrh
4.97e-77FFCP PHASE1:Mm9::chr7:28282354..28282365,+#_8c68c2ad39b4567974f60f2741579a91p@chr7:28282354..28282365, +
4.97e-77FFCP PHASE1:Mm9::chr5:112692580..112692595,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112692580..112692595, +
4.97e-77FFCP PHASE2:Mm9::chr5:113504891..113504916,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:113504891..113504916, -
4.97e-77FFCP PHASE2:Mm9::chr10:127668480..127668491,+#_8c68c2ad39b4567974f60f2741579a91p@chr10:127668480..127668491, +
4.97e-77FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_8c68c2ad39b4567974f60f2741579a91p2@Cryga
4.97e-77FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_8c68c2ad39b4567974f60f2741579a91p2@Cryga
4.97e-77FFCP PHASE2:Mm9::chr5:113507470..113507483,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:113507470..113507483, -
4.97e-77FFCP PHASE2:Mm9::chr1:65146997..65147021,-#_8c68c2ad39b4567974f60f2741579a91p@chr1:65146997..65147021, -
4.97e-77FFCP PHASE1:Mm9::chr5:112688342..112688357,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112688342..112688357, +
4.97e-77FFCP PHASE1:Mm9::chr3:129525435..129525448,-#_8c68c2ad39b4567974f60f2741579a91p2@Rrh
4.97e-77FFCP PHASE2:Mm9::chr14:35413322..35413333,-#_8c68c2ad39b4567974f60f2741579a91p1@Opn4
4.97e-77FFCP PHASE2:Mm9::chr5:112690636..112690656,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112690636..112690656, +
4.97e-77FFCP PHASE2:Mm9::chr5:112696408..112696421,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:112696408..112696421, -
4.97e-77FFCP PHASE2:Mm9::chr1:38092602..38092616,+#_8c68c2ad39b4567974f60f2741579a91p@chr1:38092602..38092616, +
4.97e-77FFCP PHASE1:Mm9::chr11:77532270..77532280,-#_8c68c2ad39b4567974f60f2741579a91p@chr11:77532270..77532280, -
4.97e-77FFCP PHASE1:Mm9::chr5:112690963..112690994,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112690963..112690994, +
4.97e-77FFCP PHASE1:Mm9::chr17:31816514..31816526,+#_8c68c2ad39b4567974f60f2741579a91p@chr17:31816514..31816526, +
4.97e-77FFCP PHASE1:Mm9::chr2:93906955..93906973,-#_8c68c2ad39b4567974f60f2741579a91p2@Hsd17b12
4.97e-77FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_8c68c2ad39b4567974f60f2741579a91p@chr14:49501519..49501530, -
4.97e-77FFCP PHASE1:Mm9::chr1:65146997..65147021,-#_8c68c2ad39b4567974f60f2741579a91p@chr1:65146997..65147021, -
4.97e-77FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:112675556..112675574, -
4.97e-77FFCP PHASE1:Mm9::chr10:127668480..127668491,+#_8c68c2ad39b4567974f60f2741579a91p@chr10:127668480..127668491, +
4.97e-77FFCP PHASE1:Mm9::chr8:77582194..77582219,+#_8c68c2ad39b4567974f60f2741579a91p@chr8:77582194..77582219, +
4.97e-77FFCP PHASE2:Mm9::chr5:112690729..112690741,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112690729..112690741, +
4.97e-77FFCP PHASE1:Mm9::chr17:31818629..31818644,+#_8c68c2ad39b4567974f60f2741579a91p@chr17:31818629..31818644, +
4.97e-77FFCP PHASE2:Mm9::chr5:112688342..112688357,+#_8c68c2ad39b4567974f60f2741579a91p@chr5:112688342..112688357, +
4.97e-77FFCP PHASE1:Mm9::chr14:35413322..35413333,-#_8c68c2ad39b4567974f60f2741579a91p1@Opn4
4.97e-77FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_8c68c2ad39b4567974f60f2741579a91p1@Impg2
4.97e-77FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_8c68c2ad39b4567974f60f2741579a91p1@Cngb3
4.97e-77FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:112681470..112681483, -
4.97e-77FFCP PHASE1:Mm9::chr5:113504891..113504916,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:113504891..113504916, -
4.97e-77FFCP PHASE2:Mm9::chr1:38092538..38092550,+#_8c68c2ad39b4567974f60f2741579a91p@chr1:38092538..38092550, +
4.97e-77FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_8c68c2ad39b4567974f60f2741579a91p@chr15:36655026..36655032, +
4.97e-77FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_8c68c2ad39b4567974f60f2741579a91p@chr1:65147201..65147212, -
4.97e-77FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_8c68c2ad39b4567974f60f2741579a91p@chr5:113506190..113506202, -
4.97e-77FFCP PHASE2:Mm9::chr3:129525405..129525428,-#_8c68c2ad39b4567974f60f2741579a91p1@Rrh
4.97e-77FFCP PHASE1:Mm9::chr3:34488839..34488876,+#_8c68c2ad39b4567974f60f2741579a91p1@ENSMUST00000173365