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UBERON:0004876

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Name:urogenital ridge
Namespace:FANTOM
Definition:"An embryological structure which give rise to a portion of the external genitalia. It differentiates into two structures: gonadal ridge -- medial -- primarily reproductive system; nephrogenic cord -- lateral -- primarily urinary system. In the female, the urogenital folds become the labia minora. In contrast, the labia majora are formed by the labioscrotal folds; In the male, they form the spongy urethra and a portion of the shaft of the penis, not including the glans.[WP]." [Wikipedia:Urogenital_folds]
Xrefs:
links:

BTO:0001402
EHDAA2:0004022
EMAPA:30888
EMAPA:30899
ncithesaurus:Urogenital_Ridge

SCTID:308801004
Synonyms: "urogenital fold" EXACT []
Comments:Less commonly, urogenital fold refers to the fold in the mesonephros which is the precursor of e.g. the suspensory ligament of the ovary. This is the case in older versions of Gray's anatomy[WP]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0003064(intermediate mesoderm),UBERON:0012292(embryonic cloacal fold)
part_of:UBERON:0000922(embryo),UBERON:0009196(indifferent external genitalia)



Children

develops from:UBERON:0000989 (penis),UBERON:0004875 (nephrogenic cord),UBERON:0005294 (genital ridge),UBERON:0013241 (embryonic urethral groove)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004876 (urogenital ridge), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_bd8d45d216ca6b0ab4f3ac0dbb11402cp4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_bd8d45d216ca6b0ab4f3ac0dbb11402c+, p@chr10:127470655..127470664
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_bd8d45d216ca6b0ab4f3ac0dbb11402cp4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_bd8d45d216ca6b0ab4f3ac0dbb11402cp@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_bd8d45d216ca6b0ab4f3ac0dbb11402cp4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_bd8d45d216ca6b0ab4f3ac0dbb11402cp@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_bd8d45d216ca6b0ab4f3ac0dbb11402cp4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_bd8d45d216ca6b0ab4f3ac0dbb11402cp@chr14:63585028..63585037, -
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_f2d507e89f9ab61ad1a000d80699ff08p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_f2d507e89f9ab61ad1a000d80699ff08p@chr2:152388713..152388729, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_103ddfe95681fe0a395828594bb2fbd5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_103ddfe95681fe0a395828594bb2fbd5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_103ddfe95681fe0a395828594bb2fbd5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_103ddfe95681fe0a395828594bb2fbd5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_103ddfe95681fe0a395828594bb2fbd5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_103ddfe95681fe0a395828594bb2fbd5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_103ddfe95681fe0a395828594bb2fbd5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_103ddfe95681fe0a395828594bb2fbd5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_103ddfe95681fe0a395828594bb2fbd5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_103ddfe95681fe0a395828594bb2fbd5p@chr14:63585048..63585062, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_97f64b94852f89ec0e28619c0bbee7b4p@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_97f64b94852f89ec0e28619c0bbee7b4p@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_97f64b94852f89ec0e28619c0bbee7b4p2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_97f64b94852f89ec0e28619c0bbee7b4p@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_97f64b94852f89ec0e28619c0bbee7b4p@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_97f64b94852f89ec0e28619c0bbee7b4+, p@chr9:26732045..26732085
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_97f64b94852f89ec0e28619c0bbee7b4p2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_97f64b94852f89ec0e28619c0bbee7b4-, p@chr9:26611246..26611253
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_af2c87aca5571f408fcc49596bb9da5dp@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_af2c87aca5571f408fcc49596bb9da5dp@chr2:69981027..69981032, +
4.54e-44FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chrX:130496286..130496293, -
4.54e-44FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:160573065..160573077, +
4.54e-44FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_51d6a80e3402d0ff911721ebbf4c88e5p1@Wfdc6b
4.54e-44FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chrX:75798157..75798162, -
4.54e-44FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr5:112721323..112721328, +
4.54e-44FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_51d6a80e3402d0ff911721ebbf4c88e5p3@Gm3428
4.54e-44FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:24270118..24270122, -
4.54e-44FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr10:28772042..28772046, -
4.54e-44FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:87936238..87936249, +
4.54e-44FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_51d6a80e3402d0ff911721ebbf4c88e5p3@Glb1l2
4.54e-44FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr6:147624258..147624285, -
4.54e-44FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr9:26719400..26719404, -
4.54e-44FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:167688595..167688624, +
4.54e-44FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr11:101959159..101959163, +
4.54e-44FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:19141371..19141383, +
4.54e-44FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr11:20817297..20817313, +
4.54e-44FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:25677632..25677636, -
4.54e-44FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_51d6a80e3402d0ff911721ebbf4c88e5p7@Rnase12
4.54e-44FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_51d6a80e3402d0ff911721ebbf4c88e5p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:172632171..172632178, -
4.54e-44FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr16:43230846..43230884, +
4.54e-44FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chrX:12571771..12571780, -
4.54e-44FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr16:92995710..92995753, +
4.54e-44FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:160573065..160573077, +
4.54e-44FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:52712765..52712772, +
4.54e-44FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:21385729..21385768, +
4.54e-44FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:23045782..23045791, +
4.54e-44FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr14:67453354..67453365, -
4.54e-44FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr11:96140694..96140720, +
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_51d6a80e3402d0ff911721ebbf4c88e5p2@ENSMUST00000152401
4.54e-44FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr17:73221016..73221031, +
4.54e-44FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:91107095..91107103, +
4.54e-44FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_51d6a80e3402d0ff911721ebbf4c88e5p2@Defb23
4.54e-44FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr15:75347689..75347703, +
4.54e-44FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr14:63611214..63611229, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:21379372..21379404, +
4.54e-44FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr9:26719400..26719404, -
4.54e-44FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr4:40010825..40010844, -
4.54e-44FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:87922962..87922982, +
4.54e-44FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:155697874..155697885, -
4.54e-44FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_51d6a80e3402d0ff911721ebbf4c88e5+, p@chr5:110773580..110773589
4.54e-44FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr12:104945515..104945524, -
4.54e-44FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_51d6a80e3402d0ff911721ebbf4c88e5p15@Alpl
4.54e-44FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr15:75304916..75304925, +
4.54e-44FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:156048695..156048707, +
4.54e-44FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_51d6a80e3402d0ff911721ebbf4c88e5p17@Capn5
4.54e-44FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:148625223..148625234, +
4.54e-44FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr1:43367743..43367754, -
4.54e-44FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:96014490..96014496, +
4.54e-44FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr4:40010825..40010844, -
4.54e-44FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:52712765..52712772, +
4.54e-44FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr2:152388977..152388983, +
4.54e-44FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:107073888..107073914, -
4.54e-44FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr14:63611201..63611210, +
4.54e-44FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr14:66521865..66521876, +
4.54e-44FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_51d6a80e3402d0ff911721ebbf4c88e5p3@Lcn12
4.54e-44FFCP PHASE2:Mm9::chr13:21381777..21381789,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr13:21381777..21381789, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr5:31379437..31379448, +
4.54e-44FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr16:23308115..23308126, +
4.54e-44FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr5:31379972..31379981, +
4.54e-44FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_51d6a80e3402d0ff911721ebbf4c88e5p@chr16:28323634..28323657, -
4.54e-44FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr4:134893699..134893708, +
4.54e-44FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_51d6a80e3402d0ff911721ebbf4c88e5-, p@chr5:66513886..66513897
4.54e-44FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr5:35930667..35930691, +
4.54e-44FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_51d6a80e3402d0ff911721ebbf4c88e5p1@9230113P08Rik
4.54e-44FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_51d6a80e3402d0ff911721ebbf4c88e5p@chr8:25706249..25706254, +
4.54e-44FFCP PHASE1:Mm9::chr9:26610184..26610191,-#_51d6a80e3402d0ff911721ebbf4c88e5p4@Glb1l2