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{{UBERON
{{UBERON
|id=UBERON:0004912
|alt_id=
|name=biliary bud
|namespace=
|def=
|xref=EHDAA2:0000171;;EMAPA:16561;;EMAPA:16565;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/4f/Gray1088.png/200px-Gray1088.png;;VHOG:0001351
|is_a=UBERON:0003914;;UBERON:0009497
|synonym="hepatic diverticulum" RELATED [EMAPA:16561]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0004161
|develops_from=UBERON:0004161
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004912
|is_a=UBERON:0003914 ;;UBERON:0009497
|is_obsolete=
|located_in=
|located_in=
|name=biliary bud
|namespace=
|obo_creation_date=
|part_of=UBERON:0006235
|part_of=UBERON:0006235
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="hepatic diverticulum" RELATED [EMAPA:16561]
|union_of=
|xref=EHDAA2:0000171;;EMAPA:16561;;EMAPA:16565;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/4f/Gray1088.png/200px-Gray1088.png;;VHOG:0001351
}}
}}

Revision as of 11:32, 12 September 2014

Name:biliary bud
Xrefs:
links:

EHDAA2:0000171
EMAPA:16561
EMAPA:16565
[ 200px-Gray1088.png 200px-Gray1088.png]

VHOG:0001351
Synonyms: "hepatic diverticulum" RELATED [EMAPA:16561]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0009497(epithelium of foregut-midgut junction)
develops_from:UBERON:0004161(septum transversum)
part_of:UBERON:0006235(foregut-midgut junction)



Children

develops from:UBERON:0001173 (biliary tree),UBERON:0002110 (gallbladder)
part of:UBERON:0006242 (gall bladder primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004912 (biliary bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_5a602257860f31ae6792ece8522f4c51p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_5a602257860f31ae6792ece8522f4c51p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_5a602257860f31ae6792ece8522f4c51p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_5a602257860f31ae6792ece8522f4c51p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_5a602257860f31ae6792ece8522f4c51p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_5a602257860f31ae6792ece8522f4c51p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_5a602257860f31ae6792ece8522f4c51p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_5a602257860f31ae6792ece8522f4c51p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_5a602257860f31ae6792ece8522f4c51p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_5a602257860f31ae6792ece8522f4c51p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_5a602257860f31ae6792ece8522f4c51p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_5a602257860f31ae6792ece8522f4c51p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_5a602257860f31ae6792ece8522f4c51p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_5a602257860f31ae6792ece8522f4c51p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_5a602257860f31ae6792ece8522f4c51p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_5a602257860f31ae6792ece8522f4c51p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_5a602257860f31ae6792ece8522f4c51p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_5a602257860f31ae6792ece8522f4c51p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_5a602257860f31ae6792ece8522f4c51p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_5a602257860f31ae6792ece8522f4c51p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_5a602257860f31ae6792ece8522f4c51p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_5a602257860f31ae6792ece8522f4c51p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_5a602257860f31ae6792ece8522f4c51p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_5a602257860f31ae6792ece8522f4c51p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_5a602257860f31ae6792ece8522f4c51p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_5a602257860f31ae6792ece8522f4c51p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_5a602257860f31ae6792ece8522f4c51p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_5a602257860f31ae6792ece8522f4c51p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_5a602257860f31ae6792ece8522f4c51p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_5a602257860f31ae6792ece8522f4c51p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_5a602257860f31ae6792ece8522f4c51p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_5a602257860f31ae6792ece8522f4c51p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_5a602257860f31ae6792ece8522f4c51p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_5a602257860f31ae6792ece8522f4c51p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_5a602257860f31ae6792ece8522f4c51p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_5a602257860f31ae6792ece8522f4c51p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_5a602257860f31ae6792ece8522f4c51p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_5a602257860f31ae6792ece8522f4c51p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_5a602257860f31ae6792ece8522f4c51p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_5a602257860f31ae6792ece8522f4c51p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_5a602257860f31ae6792ece8522f4c51p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_5a602257860f31ae6792ece8522f4c51p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_5a602257860f31ae6792ece8522f4c51p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_5a602257860f31ae6792ece8522f4c51p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_5a602257860f31ae6792ece8522f4c51p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_5a602257860f31ae6792ece8522f4c51p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_5a602257860f31ae6792ece8522f4c51p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_5a602257860f31ae6792ece8522f4c51p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_5a602257860f31ae6792ece8522f4c51p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_5a602257860f31ae6792ece8522f4c51p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_5a602257860f31ae6792ece8522f4c51p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_5a602257860f31ae6792ece8522f4c51p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_5a602257860f31ae6792ece8522f4c51p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_5a602257860f31ae6792ece8522f4c51p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_5a602257860f31ae6792ece8522f4c51p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_5a602257860f31ae6792ece8522f4c51p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_5a602257860f31ae6792ece8522f4c51p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_5a602257860f31ae6792ece8522f4c51p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_5a602257860f31ae6792ece8522f4c51p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_5a602257860f31ae6792ece8522f4c51p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_5a602257860f31ae6792ece8522f4c51p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_5a602257860f31ae6792ece8522f4c51p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_5a602257860f31ae6792ece8522f4c51p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_5a602257860f31ae6792ece8522f4c51p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_5a602257860f31ae6792ece8522f4c51p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_5a602257860f31ae6792ece8522f4c51p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_5a602257860f31ae6792ece8522f4c51p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_5a602257860f31ae6792ece8522f4c51p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_5a602257860f31ae6792ece8522f4c51p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_5a602257860f31ae6792ece8522f4c51p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_5a602257860f31ae6792ece8522f4c51p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_5a602257860f31ae6792ece8522f4c51p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_5a602257860f31ae6792ece8522f4c51p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_5a602257860f31ae6792ece8522f4c51p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_5a602257860f31ae6792ece8522f4c51p8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_5a602257860f31ae6792ece8522f4c51p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_5a602257860f31ae6792ece8522f4c51p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_5a602257860f31ae6792ece8522f4c51p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_5a602257860f31ae6792ece8522f4c51p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_5a602257860f31ae6792ece8522f4c51p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_5a602257860f31ae6792ece8522f4c51p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_5a602257860f31ae6792ece8522f4c51p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_5a602257860f31ae6792ece8522f4c51p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_5a602257860f31ae6792ece8522f4c51p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_5a602257860f31ae6792ece8522f4c51p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_5a602257860f31ae6792ece8522f4c51p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_5a602257860f31ae6792ece8522f4c51p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_5a602257860f31ae6792ece8522f4c51p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_5a602257860f31ae6792ece8522f4c51p@chr12:74684893..74684910, -

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