FFCP PHASE1:Hg19::chr20:55012583..55012585,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr20:55012583..55012585,+ | |||
|id=chr20:55012583..55012585,+ | |||
|ontology_enrichment_celltype=CL:0000094!2.08e-37!8;CL:0000775!8.98e-37!3;CL:0000081!3.10e-27!11;CL:0000766!1.92e-20!76;CL:0000763!1.99e-13!112;CL:0000049!1.99e-13!112;CL:0000738!2.18e-12!140;CL:0002032!2.99e-10!165;CL:0000837!2.99e-10!165;CL:0002274!3.76e-10!5;CL:0000457!3.76e-10!5;CL:0002191!3.76e-10!5;CL:0000097!3.76e-10!5;CL:0000831!3.76e-10!5;CL:0002028!3.76e-10!5;CL:0000037!9.19e-10!172;CL:0000566!9.19e-10!172;CL:0000988!3.95e-09!182;CL:0000840!1.04e-08!5;CL:0001029!1.04e-08!5;CL:0000839!2.00e-07!70;CL:0000771!2.58e-07!2;CL:0000557!2.60e-07!71;CL:0002262!2.74e-07!2;CL:1000398!2.74e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.33e-118;3!CL:0000094;4.74e-79;8!CL:0000081;8.62e-58;11!CL:0000771;5.69e-21;2!CL:0002262;6.96e-21;2!CL:1000398;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.33e-118,3;CL:0000094,4.74e-79,8;CL:0000081,8.62e-58,11;CL:0000771,5.70e-21,2;CL:0002262,6.96e-21,2;CL:1000398,6.96e-21,2;CL:0000766,2.24e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;6.96e-21;2!UBERON:0003497;6.96e-21;2!UBERON:0003909;6.96e-21;2!UBERON:0003835;6.96e-21;2!UBERON:0001280;2.09e-14;3!UBERON:0004647;2.09e-14;3!UBERON:0003513;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,6.96e-21,2;UBERON:0003497,6.96e-21,2;UBERON:0003909,6.96e-21,2;UBERON:0003835,6.96e-21,2;UBERON:0001280,2.09e-14,3;UBERON:0004647,2.09e-14,3;UBERON:0005171,2.09e-14,3;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0003513,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,5.9832291840805,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:55012583..55012585,+ | |||
}} |
Revision as of 12:21, 21 January 2014
Short description: | p@chr20:55012583..55012585, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:55012583..55012585, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.33e-118 | 3 |
granulocyte | 4.74e-79 | 8 |
blood cell | 8.62e-58 | 11 |
eosinophil | 5.70e-21 | 2 |
endothelial cell of sinusoid | 6.96e-21 | 2 |
endothelial cell of hepatic sinusoid | 6.96e-21 | 2 |
myeloid leukocyte | 2.24e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 6.96e-21 | 2 |
abdomen blood vessel | 6.96e-21 | 2 |
sinusoid | 6.96e-21 | 2 |
abdominal segment blood vessel | 6.96e-21 | 2 |
liver parenchyma | 2.09e-14 | 3 |
liver lobule | 2.09e-14 | 3 |
hepatic duct | 2.09e-14 | 3 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
trunk blood vessel | 6.39e-07 | 7 |