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Latest revision as of 16:57, 26 June 2012

Name:cell part
Definition:"Anatomical structure that is a direct part of the cell." [CARO:MAH]
Xrefs:
links:

AAO:0010271
BILA:0000014
CARO:0000014
FBbt:00007012
FMA:86454
GO:0044464
HAO:0000014
ncithesaurus:Cell_Part
NIF_Subcellular:sao-1337158144
OpenCyc:Mx4rwQwkcZwpEbGdrcN5Y29ycA

TGMA:0001834
Synonyms: "cell component" RELATED [CARO:0000014]
Comments:todo - move metadata to GO and obsolete this class. Note the inconsistency between the usage of the label 'cell component' in GO and CARO
Alt_id: UBERON:CARO_0000014-FBbt_00007012-FMA_86454
Subset: upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)



Children

is a:UBERON:0005889 (zygote cortex)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000470 (cell part), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results