Personal tools

UBERON:0004912

From FANTOM5_SSTAR

Revision as of 17:49, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:biliary bud
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0000171
EMAPA:16561
EMAPA:16565
[ 200px-Gray1088.png 200px-Gray1088.png]

VHOG:0001351
Synonyms: "hepatic diverticulum" RELATED [EMAPA:16561]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0009497(epithelium of foregut-midgut junction)
develops_from:UBERON:0004161(septum transversum)
part_of:UBERON:0006235(foregut-midgut junction)



Children

develops from:UBERON:0001173 (biliary tree),UBERON:0002110 (gallbladder)
part of:UBERON:0006242 (gall bladder primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004912 (biliary bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_5a602257860f31ae6792ece8522f4c51p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_5a602257860f31ae6792ece8522f4c51p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_5a602257860f31ae6792ece8522f4c51p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_5a602257860f31ae6792ece8522f4c51p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_5a602257860f31ae6792ece8522f4c51p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_5a602257860f31ae6792ece8522f4c51p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_5a602257860f31ae6792ece8522f4c51p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_5a602257860f31ae6792ece8522f4c51p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_5a602257860f31ae6792ece8522f4c51p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_5a602257860f31ae6792ece8522f4c51p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_5a602257860f31ae6792ece8522f4c51p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_5a602257860f31ae6792ece8522f4c51p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_5a602257860f31ae6792ece8522f4c51p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_5a602257860f31ae6792ece8522f4c51p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_5a602257860f31ae6792ece8522f4c51p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_5a602257860f31ae6792ece8522f4c51p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_5a602257860f31ae6792ece8522f4c51p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_5a602257860f31ae6792ece8522f4c51p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_5a602257860f31ae6792ece8522f4c51p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_5a602257860f31ae6792ece8522f4c51p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_5a602257860f31ae6792ece8522f4c51p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_5a602257860f31ae6792ece8522f4c51p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_5a602257860f31ae6792ece8522f4c51p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_5a602257860f31ae6792ece8522f4c51p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_5a602257860f31ae6792ece8522f4c51p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_5a602257860f31ae6792ece8522f4c51p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_5a602257860f31ae6792ece8522f4c51p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_5a602257860f31ae6792ece8522f4c51p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_5a602257860f31ae6792ece8522f4c51p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_5a602257860f31ae6792ece8522f4c51p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_5a602257860f31ae6792ece8522f4c51p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_5a602257860f31ae6792ece8522f4c51p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_5a602257860f31ae6792ece8522f4c51p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_5a602257860f31ae6792ece8522f4c51p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_5a602257860f31ae6792ece8522f4c51p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_5a602257860f31ae6792ece8522f4c51p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_5a602257860f31ae6792ece8522f4c51p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_5a602257860f31ae6792ece8522f4c51p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_5a602257860f31ae6792ece8522f4c51p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_5a602257860f31ae6792ece8522f4c51p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_5a602257860f31ae6792ece8522f4c51p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_5a602257860f31ae6792ece8522f4c51p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_5a602257860f31ae6792ece8522f4c51p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_5a602257860f31ae6792ece8522f4c51p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_5a602257860f31ae6792ece8522f4c51p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_5a602257860f31ae6792ece8522f4c51p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_5a602257860f31ae6792ece8522f4c51p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_5a602257860f31ae6792ece8522f4c51p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_5a602257860f31ae6792ece8522f4c51p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_5a602257860f31ae6792ece8522f4c51p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_5a602257860f31ae6792ece8522f4c51p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_5a602257860f31ae6792ece8522f4c51p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_5a602257860f31ae6792ece8522f4c51p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_5a602257860f31ae6792ece8522f4c51p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_5a602257860f31ae6792ece8522f4c51p4@Pag1
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_5a602257860f31ae6792ece8522f4c51p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_5a602257860f31ae6792ece8522f4c51p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_5a602257860f31ae6792ece8522f4c51p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_5a602257860f31ae6792ece8522f4c51p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_5a602257860f31ae6792ece8522f4c51p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_5a602257860f31ae6792ece8522f4c51p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_5a602257860f31ae6792ece8522f4c51p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_5a602257860f31ae6792ece8522f4c51p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_5a602257860f31ae6792ece8522f4c51p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_5a602257860f31ae6792ece8522f4c51p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_5a602257860f31ae6792ece8522f4c51p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_5a602257860f31ae6792ece8522f4c51p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_5a602257860f31ae6792ece8522f4c51p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_5a602257860f31ae6792ece8522f4c51p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_5a602257860f31ae6792ece8522f4c51p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_5a602257860f31ae6792ece8522f4c51p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_5a602257860f31ae6792ece8522f4c51p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_5a602257860f31ae6792ece8522f4c51p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_5a602257860f31ae6792ece8522f4c51p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_5a602257860f31ae6792ece8522f4c51p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_5a602257860f31ae6792ece8522f4c51p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_5a602257860f31ae6792ece8522f4c51p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_5a602257860f31ae6792ece8522f4c51p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_5a602257860f31ae6792ece8522f4c51p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_5a602257860f31ae6792ece8522f4c51p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_5a602257860f31ae6792ece8522f4c51p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_5a602257860f31ae6792ece8522f4c51p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_5a602257860f31ae6792ece8522f4c51p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_5a602257860f31ae6792ece8522f4c51p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_5a602257860f31ae6792ece8522f4c51p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_5a602257860f31ae6792ece8522f4c51p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82209805..82209851, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004912&oldid=3277719"