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Revision as of 17:22, 15 June 2012

Name:circumventricular organ
Definition:"Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs]
Xrefs:
links:

FMA:84081
MA:0002942

NIF_GrossAnatomy:nlx_anat_20090312
Synonyms: "circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
"CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
Comments:AO notes: MA subdivides into sensory and secretory

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002616(regional part of brain)
part_of:UBERON:0000955(brain)



Children

is a:UBERON:0010134 (secretory circumventricular organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005408 (circumventricular organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr7:9186866..9186885,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9186866..9186885, -
3.29e-195FFCP PHASE1:Hg19::chr11:18063707..18063720,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18063707..18063720, -
3.29e-195FFCP PHASE2:Hg19::chr13:56628548..56628553,-#_b3259e9f673ae942fe92d28dd8110bccp@chr13:56628548..56628553, -
3.29e-195FFCP PHASE1:Hg19::chr1:57907030..57907050,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57907030..57907050, +
3.29e-195FFCP PHASE2:Hg19::chr3:100942645..100942655,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:100942645..100942655, -
3.29e-195FFCP PHASE2:Hg19::chr8:135515939..135515941,+#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135515939..135515941, +
3.29e-195FFCP PHASE1:Hg19::chr9:25264978..25265001,+#_b3259e9f673ae942fe92d28dd8110bccp@chr9:25264978..25265001, +
3.29e-195FFCP PHASE2:Hg19::chr1:45782001..45782009,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:45782001..45782009, +
3.29e-195FFCP PHASE1:Hg19::chr11:74951707..74951719,+#_b3259e9f673ae942fe92d28dd8110bccp9@LOC100507050
3.29e-195FFCP PHASE2:Hg19::chr7:9782610..9782613,+#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9782610..9782613, +
3.29e-195FFCP PHASE1:Hg19::chr10:18580269..18580290,+#_b3259e9f673ae942fe92d28dd8110bccp@chr10:18580269..18580290, +
3.29e-195FFCP PHASE1:Hg19::chr2:216447425..216447432,-#_b3259e9f673ae942fe92d28dd8110bccp2@ENST00000457625
3.29e-195FFCP PHASE2:Hg19::chr12:6956383..6956390,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:6956383..6956390, +
3.29e-195FFCP PHASE2:Hg19::chr8:135473205..135473218,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473205..135473218, -
3.29e-195FFCP PHASE1:Hg19::chr11:84530787..84530803,+#_b3259e9f673ae942fe92d28dd8110bccp@chr11:84530787..84530803, +
3.29e-195FFCP PHASE2:Hg19::chr8:135474173..135474185,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135474173..135474185, -
3.29e-195FFCP PHASE1:Hg19::chr1:99860786..99860791,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860786..99860791, -
3.29e-195FFCP PHASE1:Hg19::chr12:55422858..55422866,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:55422858..55422866, +
3.29e-195FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_b3259e9f673ae942fe92d28dd8110bccp28@KCNIP4
3.29e-195FFCP PHASE1:Hg19::chr3:101038595..101038604,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:101038595..101038604, -
3.29e-195FFCP PHASE1:Hg19::chr8:135520309..135520324,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135520309..135520324, -
3.29e-195FFCP PHASE2:Hg19::chr11:72297712..72297715,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:72297712..72297715, -
3.29e-195FFCP PHASE1:Hg19::chr8:135472861..135472868,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135472861..135472868, -
3.29e-195FFCP PHASE2:Hg19::chr1:13820103..13820109,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:13820103..13820109, +
3.29e-195FFCP PHASE1:Hg19::chr6:13009334..13009341,-#_b3259e9f673ae942fe92d28dd8110bccp@chr6:13009334..13009341, -
3.29e-195FFCP PHASE1:Hg19::chr12:60826120..60826127,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:60826120..60826127, +
3.29e-195FFCP PHASE2:Hg19::chr1:57914395..57914398,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57914395..57914398, +
3.29e-195FFCP PHASE1:Hg19::chr16:18036005..18036011,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:18036005..18036011, -
3.29e-195FFCP PHASE1:Hg19::chr12:121088132..121088135,+#_b3259e9f673ae942fe92d28dd8110bccp15@CABP1
3.29e-195FFCP PHASE1:Hg19::chr11:18039672..18039678,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18039672..18039678, -
3.29e-195FFCP PHASE1:Hg19::chr1:154540028..154540037,+#_b3259e9f673ae942fe92d28dd8110bccp4@CHRNB2
3.29e-195FFCP PHASE2:Hg19::chr17:74463567..74463574,+#_b3259e9f673ae942fe92d28dd8110bccp4@AANAT
3.29e-195FFCP PHASE1:Hg19::chr13:52650486..52650491,-#_b3259e9f673ae942fe92d28dd8110bccp@chr13:52650486..52650491, -
3.29e-195FFCP PHASE2:Hg19::chr17:55484129..55484139,+#_b3259e9f673ae942fe92d28dd8110bccp@chr17:55484129..55484139, +
3.29e-195FFCP PHASE2:Hg19::chr7:9202487..9202498,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9202487..9202498, -
3.29e-195FFCP PHASE2:Hg19::chr16:50898038..50898042,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:50898038..50898042, -
3.29e-195FFCP PHASE2:Hg19::chr3:54952412..54952416,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:54952412..54952416, -
3.29e-195FFCP PHASE2:Hg19::chr10:80984180..80984190,-#_b3259e9f673ae942fe92d28dd8110bccp@chr10:80984180..80984190, -
3.29e-195FFCP PHASE1:Hg19::chr16:50898098..50898107,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:50898098..50898107, -
3.29e-195FFCP PHASE1:Hg19::chr8:116085391..116085419,+#_b3259e9f673ae942fe92d28dd8110bccp@chr8:116085391..116085419, +
3.29e-195FFCP PHASE2:Hg19::chr2:17141934..17141935,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17141934..17141935, +
3.29e-195FFCP PHASE2:Hg19::chr1:99860883..99860921,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860883..99860921, -
3.29e-195FFCP PHASE2:Hg19::chr8:135473472..135473477,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473472..135473477, -
3.29e-195FFCP PHASE2:Hg19::chr11:18053180..18053192,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18053180..18053192, -
3.29e-195FFCP PHASE1:Hg19::chr1:204667243..204667248,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:204667243..204667248, +
3.29e-195FFCP PHASE2:Hg19::chr8:135504314..135504320,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135504314..135504320, -
3.29e-195FFCP PHASE2:Hg19::chr7:36878535..36878540,+#_b3259e9f673ae942fe92d28dd8110bccp4@ENST00000439998
3.29e-195FFCP PHASE2:Hg19::chr14:57197193..57197194,-#_b3259e9f673ae942fe92d28dd8110bccp1@ENST00000554597
3.29e-195FFCP PHASE1:Hg19::chr2:17185958..17185998,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17185958..17185998, +
3.29e-195FFCP PHASE1:Hg19::chr3:17085717..17085733,-#_b3259e9f673ae942fe92d28dd8110bccp2@PLCL2-AS1
3.29e-195FFCP PHASE2:Hg19::chr3:139938385..139938390,+#_b3259e9f673ae942fe92d28dd8110bccp@chr3:139938385..139938390, +
3.29e-195FFCP PHASE1:Hg19::chrX:146290937..146290942,+#_b3259e9f673ae942fe92d28dd8110bccp@chrX:146290937..146290942, +
3.29e-195FFCP PHASE2:Hg19::chr2:17040158..17040170,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17040158..17040170, +
3.29e-195FFCP PHASE2:Hg19::chr7:9178350..9178369,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9178350..9178369, -
3.29e-195FFCP PHASE1:Hg19::chr11:18042584..18042593,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18042584..18042593, -
3.29e-195FFCP PHASE2:Hg19::chr8:135473983..135473986,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473983..135473986, -
3.29e-195FFCP PHASE1:Hg19::chr11:72297712..72297715,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:72297712..72297715, -
3.29e-195FFCP PHASE2:Hg19::chr2:4224059..4224062,-#_b3259e9f673ae942fe92d28dd8110bccp@chr2:4224059..4224062, -
3.29e-195FFCP PHASE1:Hg19::chr8:135473205..135473218,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473205..135473218, -
3.29e-195FFCP PHASE2:Hg19::chr18:56963093..56963105,-#_b3259e9f673ae942fe92d28dd8110bccp@chr18:56963093..56963105, -
3.29e-195FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:87751918..87751928, -
3.29e-195FFCP PHASE2:Hg19::chr8:116127086..116127103,+#_b3259e9f673ae942fe92d28dd8110bccp@chr8:116127086..116127103, +
3.29e-195FFCP PHASE2:Hg19::chr7:120842768..120842790,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:120842768..120842790, -
3.29e-195FFCP PHASE1:Hg19::chr7:9186866..9186885,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9186866..9186885, -
3.29e-195FFCP PHASE2:Hg19::chr16:51175701..51175708,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:51175701..51175708, -
3.29e-195FFCP PHASE1:Hg19::chr3:100942645..100942655,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:100942645..100942655, -
3.29e-195FFCP PHASE2:Hg19::chr2:108604491..108604499,+#_b3259e9f673ae942fe92d28dd8110bccp8@SLC5A7
3.29e-195FFCP PHASE1:Hg19::chr8:135515939..135515941,+#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135515939..135515941, +
3.29e-195FFCP PHASE2:Hg19::chr16:18066345..18066365,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:18066345..18066365, -
3.29e-195FFCP PHASE1:Hg19::chr1:45782001..45782009,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:45782001..45782009, +
3.29e-195FFCP PHASE1:Hg19::chr17:6328202..6328224,-#_b3259e9f673ae942fe92d28dd8110bccp1@BC014398
3.29e-195FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9782610..9782613, +
3.29e-195FFCP PHASE2:Hg19::chrX:33146501..33146521,-#_b3259e9f673ae942fe92d28dd8110bccp32@DMD
3.29e-195FFCP PHASE1:Hg19::chr11:18041206..18041211,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18041206..18041211, -
3.29e-195FFCP PHASE2:Hg19::chr11:18067951..18067954,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18067951..18067954, -
3.29e-195FFCP PHASE2:Hg19::chr3:107545606..107545631,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:107545606..107545631, -
3.29e-195FFCP PHASE1:Hg19::chr8:135474173..135474185,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135474173..135474185, -
3.29e-195FFCP PHASE2:Hg19::chr7:129084265..129084288,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:129084265..129084288, -
3.29e-195FFCP PHASE1:Hg19::chr4:20985967..20985972,-#_b3259e9f673ae942fe92d28dd8110bccp28@KCNIP4
3.29e-195FFCP PHASE1:Hg19::chr1:57914395..57914398,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57914395..57914398, +
3.29e-195FFCP PHASE1:Hg19::chr15:55470964..55470974,-#_b3259e9f673ae942fe92d28dd8110bccp@chr15:55470964..55470974, -
3.29e-195FFCP PHASE2:Hg19::chr9:37668094..37668097,+#_b3259e9f673ae942fe92d28dd8110bccp6@FRMPD1
3.29e-195FFCP PHASE2:Hg19::chr8:135515957..135515964,+#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135515957..135515964, +
3.29e-195FFCP PHASE2:Hg19::chr1:45782019..45782028,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:45782019..45782028, +
3.29e-195FFCP PHASE2:Hg19::chr7:9782665..9782674,+#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9782665..9782674, +
3.29e-195FFCP PHASE1:Hg19::chr1:13820103..13820109,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:13820103..13820109, +
3.29e-195FFCP PHASE2:Hg19::chr1:240177602..240177607,+#_b3259e9f673ae942fe92d28dd8110bccp17@FMN2
3.29e-195FFCP PHASE2:Hg19::chr9:88661694..88661709,-#_b3259e9f673ae942fe92d28dd8110bccp@chr9:88661694..88661709, -
3.29e-195FFCP PHASE2:Hg19::chr7:75864329..75864335,+#_b3259e9f673ae942fe92d28dd8110bccp11@SRRM3
3.29e-195FFCP PHASE2:Hg19::chr11:72297717..72297725,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:72297717..72297725, -
3.29e-195FFCP PHASE2:Hg19::chr8:135499228..135499260,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135499228..135499260, -
3.29e-195FFCP PHASE1:Hg19::chr2:17141934..17141935,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17141934..17141935, +
3.29e-195FFCP PHASE1:Hg19::chr1:99860883..99860921,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860883..99860921, -
3.29e-195FFCP PHASE1:Hg19::chr8:135473472..135473477,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473472..135473477, -
3.29e-195FFCP PHASE2:Hg19::chr3:192894646..192894653,-#_b3259e9f673ae942fe92d28dd8110bccp2@ENST00000414895
3.29e-195FFCP PHASE1:Hg19::chr7:9202487..9202498,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9202487..9202498, -
3.29e-195FFCP PHASE2:Hg19::chr5:119867229..119867240,+#_b3259e9f673ae942fe92d28dd8110bccp9@PRR16
3.29e-195FFCP PHASE1:Hg19::chr3:54952412..54952416,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:54952412..54952416, -
3.29e-195FFCP PHASE2:Hg19::chr11:18041194..18041197,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18041194..18041197, -
3.29e-195FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_b3259e9f673ae942fe92d28dd8110bccp3@NEUROG1

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