Personal tools

UBERON:0006555

From FANTOM5_SSTAR

Revision as of 11:40, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:excretory tube

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000025(tube),UBERON:0006554(urinary system structure)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
3.28e-58FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21378871..21378901, -
3.28e-58FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:11079838..11079844, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:74440187..74440209, -
3.28e-58FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:53955299..53955306, +
3.28e-58FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:96014490..96014496, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_84c76bf0c1e0476c0a3dd256f65943d6p15@Alpl
3.28e-58FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_84c76bf0c1e0476c0a3dd256f65943d6p6@Rnase12
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:83143938..83143953, -
3.28e-58FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101958844..101958851, -
3.28e-58FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_84c76bf0c1e0476c0a3dd256f65943d6p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chr14:69143309..69143319,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:52101299..52101305, +
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:50280126..50280140, +
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_84c76bf0c1e0476c0a3dd256f65943d6p1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chrX:20422498..20422506,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:20422498..20422506, +
3.28e-58FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_84c76bf0c1e0476c0a3dd256f65943d6p17@Capn5
3.28e-58FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:75329148..75329155, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:40010825..40010844, -
3.28e-58FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349414..25349424,-#_84c76bf0c1e0476c0a3dd256f65943d6p5@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:66521865..66521876, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:56772735..56772741, +
3.28e-58FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_84c76bf0c1e0476c0a3dd256f65943d6p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6p1@9230113P08Rik
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_84c76bf0c1e0476c0a3dd256f65943d6p11@Arhgef40
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_84c76bf0c1e0476c0a3dd256f65943d6p5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr19:17585885..17585901, -
3.28e-58FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21385325..21385329, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Ntsr2
3.28e-58FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:156776465..156776473, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:54359310..54359337, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379098..21379104,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:103650817..103650825, +
3.28e-58FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:103896102..103896116, -
3.28e-58FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101959159..101959163, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:65253465..65253475, +
3.28e-58FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6p11@Wars
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6p2@Gm6792
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_84c76bf0c1e0476c0a3dd256f65943d6p19@Clu
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:91107095..91107103, +