CL:0000815
From FANTOM5_SSTAR
Name: | regulatory T cell | ||
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Namespace: | FANTOM | ||
Definition: | "A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release." [GO_REF:0000031, GOC:add] | ||
Xrefs: |
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Synonyms: |
"regulatory T lymphocyte" EXACT [] "regulatory T-cell" EXACT [] "regulatory T-lymphocyte" EXACT [] "suppressor T cell" BROAD [] "suppressor T lymphocyte" BROAD [] "suppressor T-cell" BROAD [] "suppressor T-lymphocyte" BROAD [] | ||
Comments: | This cell type may express FoxP3 and CD25 and secretes IL-10 and TGF-beta. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002419(mature T cell) |
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Children
is a: | CL:0000792 (CD4-positive, CD25-positive, alpha-beta regulatory T cell),FF:11943-126A8 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (BalbcA)),FF:11944-126A9 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (C57BL 6J)),FF:11946-126B2 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (BalbcA)) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11943-126A8 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (BalbcA))
- 11944-126A9 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (C57BL 6J))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
- 11946-126B2 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (BalbcA))
Mouse (Mus musculus)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11943-126A8 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (BalbcA))
- 11944-126A9 (CD4+CD25+ regulatory T cells, antiCD3 CD28 stimulation, 06hr, pool1 (C57BL 6J))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
- 11946-126B2 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (BalbcA))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000815 (regulatory T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
4.61e-131 | FFCP PHASE2:Hg19::chr1:113160702..113160706,-#_7ab95dd728078da90f616e2dae394ac4 | p21@ST7L |
4.61e-131 | FFCP PHASE1:Hg19::chr1:113160702..113160706,-#_7ab95dd728078da90f616e2dae394ac4 | p21@ST7L |
5.68e-99 | FFCP PHASE2:Hg19::chr11:111410267..111410269,+#_f728bf5dc8a8de558b9e23cc82f780cf | p@chr11:111410267..111410269, + |
5.68e-99 | FFCP PHASE1:Hg19::chr11:111410267..111410269,+#_f728bf5dc8a8de558b9e23cc82f780cf | p@chr11:111410267..111410269, + |
1.55e-98 | FFCP PHASE2:Hg19::chr3:73015629..73015632,+#_b0723bc5add031d9fbb142c1f032198b | p@chr3:73015629..73015632, + |
1.55e-98 | FFCP PHASE1:Hg19::chr3:73015629..73015632,+#_b0723bc5add031d9fbb142c1f032198b | p@chr3:73015629..73015632, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:22022863..22022865,+#_5884893199fa68790cd27702941e5924 | p@chr10:22022863..22022865, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:108729732..108729745,+#_5884893199fa68790cd27702941e5924 | p@chr7:108729732..108729745, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:60944205..60944230,+#_5884893199fa68790cd27702941e5924 | p@chr1:60944205..60944230, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:155400229..155400241,+#_5884893199fa68790cd27702941e5924 | p3@Tnfrsf18 |
3.07e-86 | FFCP PHASE1:Mm9::chr12:114668438..114668451,+#_5884893199fa68790cd27702941e5924 | p@chr12:114668438..114668451, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:14662914..14662922,+#_5884893199fa68790cd27702941e5924 | p@chr9:14662914..14662922, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:74526430..74526446,-#_5884893199fa68790cd27702941e5924 | p@chr8:74526430..74526446, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:69148201..69148218,-#_5884893199fa68790cd27702941e5924 | p@chr9:69148201..69148218, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:48670473..48670480,+#_5884893199fa68790cd27702941e5924 | p@chr6:48670473..48670480, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:7161059..7161081,-#_5884893199fa68790cd27702941e5924 | p@chrX:7161059..7161081, - |
3.07e-86 | FFCP PHASE2:Mm9::chr13:46831423..46831426,+#_5884893199fa68790cd27702941e5924 | p@chr13:46831423..46831426, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:26709187..26709203,-#_5884893199fa68790cd27702941e5924 | p@chr17:26709187..26709203, - |
3.07e-86 | FFCP PHASE2:Mm9::chr2:139885951..139885958,-#_5884893199fa68790cd27702941e5924 | p@chr2:139885951..139885958, - |
3.07e-86 | FFCP PHASE1:Mm9::chr8:129378573..129378577,+#_5884893199fa68790cd27702941e5924 | p@chr8:129378573..129378577, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:109240261..109240265,+#_5884893199fa68790cd27702941e5924 | p@chr12:109240261..109240265, + |
3.07e-86 | FFCP PHASE1:Mm9::chr2:78812885..78812894,+#_5884893199fa68790cd27702941e5924 | p@chr2:78812885..78812894, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:60970179..60970192,-#_5884893199fa68790cd27702941e5924 | p@chr1:60970179..60970192, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:12884884..12884887,-#_5884893199fa68790cd27702941e5924 | p@chr17:12884884..12884887, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:69729950..69729959,-#_5884893199fa68790cd27702941e5924 | p@chr1:69729950..69729959, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:87518592..87518603,+#_5884893199fa68790cd27702941e5924 | p@chr17:87518592..87518603, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:113079356..113079360,-#_5884893199fa68790cd27702941e5924 | p@chr13:113079356..113079360, - |
3.07e-86 | FFCP PHASE1:Mm9::chr12:15821719..15821726,+#_5884893199fa68790cd27702941e5924 | p@chr12:15821719..15821726, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:14707496..14707511,-#_5884893199fa68790cd27702941e5924 | p@chr9:14707496..14707511, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:69727659..69727696,-#_5884893199fa68790cd27702941e5924 | p@chr1:69727659..69727696, - |
3.07e-86 | FFCP PHASE2:Mm9::chr16:89837454..89837462,-#_5884893199fa68790cd27702941e5924 | p@chr16:89837454..89837462, - |
3.07e-86 | FFCP PHASE2:Mm9::chr10:92842861..92842879,-#_5884893199fa68790cd27702941e5924 | p@chr10:92842861..92842879, - |
3.07e-86 | FFCP PHASE1:Mm9::chr2:112347343..112347355,+#_5884893199fa68790cd27702941e5924 | p@chr2:112347343..112347355, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:59357447..59357449,+#_5884893199fa68790cd27702941e5924 | p@chr15:59357447..59357449, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:13699290..13699296,+#_5884893199fa68790cd27702941e5924 | p@chr9:13699290..13699296, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:32306609..32306610,+#_5884893199fa68790cd27702941e5924 | p@chr2:32306609..32306610, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:7154622..7154647,+#_5884893199fa68790cd27702941e5924 | p@chrX:7154622..7154647, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:112347343..112347355,+#_5884893199fa68790cd27702941e5924 | p@chr2:112347343..112347355, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113079356..113079360,-#_5884893199fa68790cd27702941e5924 | p@chr13:113079356..113079360, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:56267292..56267296,+#_5884893199fa68790cd27702941e5924 | p@chr9:56267292..56267296, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:94615187..94615214,-#_5884893199fa68790cd27702941e5924 | p@chr6:94615187..94615214, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:69815958..69815961,+#_5884893199fa68790cd27702941e5924 | p@chr1:69815958..69815961, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:58784974..58784979,-#_5884893199fa68790cd27702941e5924 | p@chr10:58784974..58784979, - |
3.07e-86 | FFCP PHASE2:Mm9::chr7:108729732..108729745,+#_5884893199fa68790cd27702941e5924 | p@chr7:108729732..108729745, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:84303823..84303825,+#_5884893199fa68790cd27702941e5924 | p@chr8:84303823..84303825, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:69727854..69727859,+#_5884893199fa68790cd27702941e5924 | p@chr1:69727854..69727859, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:118084068..118084106,-#_5884893199fa68790cd27702941e5924 | p@chr11:118084068..118084106, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59357130..59357143,-#_5884893199fa68790cd27702941e5924 | p@chr15:59357130..59357143, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:12807573..12807582,+#_5884893199fa68790cd27702941e5924 | p@chr17:12807573..12807582, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:80757542..80757576,-#_5884893199fa68790cd27702941e5924 | p@chr7:80757542..80757576, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:69729718..69729723,-#_5884893199fa68790cd27702941e5924 | p@chr1:69729718..69729723, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35164593..35164602,-#_5884893199fa68790cd27702941e5924 | p6@Ng23 |
3.07e-86 | FFCP PHASE2:Mm9::chr14:101876628..101876637,-#_5884893199fa68790cd27702941e5924 | p@chr14:101876628..101876637, - |
3.07e-86 | FFCP PHASE2:Mm9::chrX:7172568..7172576,-#_5884893199fa68790cd27702941e5924 | p@chrX:7172568..7172576, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:32530971..32530976,+#_5884893199fa68790cd27702941e5924 | p@chr9:32530971..32530976, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:87518592..87518603,+#_5884893199fa68790cd27702941e5924 | p@chr17:87518592..87518603, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:80757542..80757576,-#_5884893199fa68790cd27702941e5924 | p@chr7:80757542..80757576, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:56267292..56267296,+#_5884893199fa68790cd27702941e5924 | p@chr9:56267292..56267296, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:93597971..93597979,+#_5884893199fa68790cd27702941e5924 | p@chr8:93597971..93597979, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:22022863..22022865,+#_5884893199fa68790cd27702941e5924 | p@chr10:22022863..22022865, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:148215171..148215179,+#_5884893199fa68790cd27702941e5924 | p@chrX:148215171..148215179, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:155396655..155396659,+#_5884893199fa68790cd27702941e5924 | p@chr4:155396655..155396659, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:7161176..7161185,-#_5884893199fa68790cd27702941e5924 | p@chrX:7161176..7161185, - |
3.07e-86 | FFCP PHASE1:Mm9::chr15:59354543..59354548,+#_5884893199fa68790cd27702941e5924 | p@chr15:59354543..59354548, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:60967911..60967916,+#_5884893199fa68790cd27702941e5924 | p@chr1:60967911..60967916, + |
3.07e-86 | FFCP PHASE2:Mm9::chr9:14662914..14662922,+#_5884893199fa68790cd27702941e5924 | p@chr9:14662914..14662922, + |
3.07e-86 | FFCP PHASE1:Mm9::chrX:7148320..7148329,+#_5884893199fa68790cd27702941e5924 | p@chrX:7148320..7148329, + |
3.07e-86 | FFCP PHASE1:Mm9::chr2:139885951..139885958,-#_5884893199fa68790cd27702941e5924 | p@chr2:139885951..139885958, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:32530971..32530976,+#_5884893199fa68790cd27702941e5924 | p@chr9:32530971..32530976, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:89010973..89010996,-#_5884893199fa68790cd27702941e5924 | p@chr10:89010973..89010996, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:17040514..17040521,+#_5884893199fa68790cd27702941e5924 | p@chr12:17040514..17040521, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:5504747..5504756,+#_5884893199fa68790cd27702941e5924 | p@chr15:5504747..5504756, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:60970510..60970516,+#_5884893199fa68790cd27702941e5924 | p@chr1:60970510..60970516, + |
3.07e-86 | FFCP PHASE1:Mm9::chrX:7172568..7172576,-#_5884893199fa68790cd27702941e5924 | p@chrX:7172568..7172576, - |
3.07e-86 | FFCP PHASE1:Mm9::chr7:105641398..105641405,-#_5884893199fa68790cd27702941e5924 | p@chr7:105641398..105641405, - |
3.07e-86 | FFCP PHASE2:Mm9::chr5:124484631..124484634,-#_5884893199fa68790cd27702941e5924 | p@chr5:124484631..124484634, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:124484631..124484634,-#_5884893199fa68790cd27702941e5924 | p@chr5:124484631..124484634, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:46831423..46831426,+#_5884893199fa68790cd27702941e5924 | p@chr13:46831423..46831426, + |
3.07e-86 | FFCP PHASE1:Mm9::chrX:148215171..148215179,+#_5884893199fa68790cd27702941e5924 | p@chrX:148215171..148215179, + |
3.07e-86 | FFCP PHASE2:Mm9::chr3:142250588..142250598,+#_5884893199fa68790cd27702941e5924 | p@chr3:142250588..142250598, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:69727854..69727859,+#_5884893199fa68790cd27702941e5924 | p@chr1:69727854..69727859, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:12884884..12884887,-#_5884893199fa68790cd27702941e5924 | p@chr17:12884884..12884887, - |
3.07e-86 | FFCP PHASE1:Mm9::chr11:4397528..4397535,-#_5884893199fa68790cd27702941e5924 | p@chr11:4397528..4397535, - |
3.07e-86 | FFCP PHASE1:Mm9::chrX:7161059..7161081,-#_5884893199fa68790cd27702941e5924 | p@chrX:7161059..7161081, - |
3.07e-86 | FFCP PHASE1:Mm9::chr8:74526430..74526446,-#_5884893199fa68790cd27702941e5924 | p@chr8:74526430..74526446, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:32512204..32512214,+#_5884893199fa68790cd27702941e5924 | p@chr4:32512204..32512214, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:5504747..5504756,+#_5884893199fa68790cd27702941e5924 | p@chr15:5504747..5504756, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:7147964..7147979,-#_5884893199fa68790cd27702941e5924 | p@chrX:7147964..7147979, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:60944156..60944166,+#_5884893199fa68790cd27702941e5924 | p@chr1:60944156..60944166, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:105413537..105413540,+#_5884893199fa68790cd27702941e5924 | p@chr13:105413537..105413540, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:29566022..29566044,+#_5884893199fa68790cd27702941e5924 | p@chr17:29566022..29566044, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:111613723..111613727,+#_5884893199fa68790cd27702941e5924 | p@chr12:111613723..111613727, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:18908457..18908466,-#_5884893199fa68790cd27702941e5924 | p@chr10:18908457..18908466, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:26688385..26688421,+#_5884893199fa68790cd27702941e5924 | p@chr17:26688385..26688421, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:13765981..13765988,+#_5884893199fa68790cd27702941e5924 | p@chr10:13765981..13765988, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:106142059..106142061,-#_5884893199fa68790cd27702941e5924 | p@chr7:106142059..106142061, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:69728149..69728150,+#_5884893199fa68790cd27702941e5924 | p@chr1:69728149..69728150, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:132631174..132631179,+#_5884893199fa68790cd27702941e5924 | p@chr7:132631174..132631179, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:60967911..60967916,+#_5884893199fa68790cd27702941e5924 | p@chr1:60967911..60967916, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59357447..59357449,+#_5884893199fa68790cd27702941e5924 | p@chr15:59357447..59357449, + |