FFCP PHASE1:Hg19::chr14:107078851..107078874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5555 | |HGNC=5555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390628_5end | |association_with_transcript=0bp_to_ENST00000390628_5end | ||
|cluster_id=chr14:107078851..107078874,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_1_at_IGHV1-58_5end | |description=CAGE_peak_1_at_IGHV1-58_5end | ||
|id=chr14:107078851..107078874,- | |id=chr14:107078851..107078874,- | ||
|ontology_enrichment_celltype=CL:0000236!1.39e-19!14;CL:0000945!3.34e-10!24;CL:0000826!3.34e-10!24;CL:0002619!8.09e-07!3;CL:0000842!8.09e-07!3 | |ontology_enrichment_celltype=CL:0000236!1.39e-19!14;CL:0000945!3.34e-10!24;CL:0000826!3.34e-10!24;CL:0002619!8.09e-07!3;CL:0000842!8.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.21e-29;13!CL:0000945;1.74e-14;24!CL:0000226;7.58e-09;3!CL:0000842;7.58e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.51e-27,14;CL:0000945,1.73e-14,24;CL:0000826,1.73e-14,24;CL:0000226,8.87e-09,3;CL:0000842,8.87e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.94e-07;7!UBERON:0006965;2.51e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-52!115;UBERON:0000178!2.50e-18!15;UBERON:0000179!2.50e-18!15;UBERON:0000463!2.50e-18!15 | |ontology_enrichment_uberon=UBERON:0007023!2.06e-52!115;UBERON:0000178!2.50e-18!15;UBERON:0000179!2.50e-18!15;UBERON:0000463!2.50e-18!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-25;15!UBERON:0000179;4.67e-25;15!UBERON:0000463;4.67e-25;15!UBERON:0002390;1.03e-17;32!UBERON:0002193;8.24e-13;42!UBERON:0004177;6.48e-10;5!UBERON:0005057;6.48e-10;5!UBERON:0007023;6.58e-08;114!UBERON:0001829;1.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.27e-36,114;UBERON:0000178,5.43e-25,15;UBERON:0000179,5.43e-25,15;UBERON:0000463,5.43e-25,15;UBERON:0004921,9.17e-08,118;UBERON:0003408,1.35e-07,10;UBERON:0001829,1.45e-07,2;UBERON:0004177,4.45e-07,7;UBERON:0005057,4.45e-07,7 | |||
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| ||
|short_description=p1@IGHV1-58 | |short_description=p1@IGHV1-58 | ||
}} | }} |
Latest revision as of 22:52, 18 September 2015
Short description: | p1@IGHV1-58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV1-58_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | 0bp_to_ENST00000390628_5end |
EntrezGene: | NA |
HGNC: | 5555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.51e-27 | 14 |
lymphocyte of B lineage | 1.73e-14 | 24 |
pro-B cell | 1.73e-14 | 24 |
single nucleate cell | 8.87e-09 | 3 |
mononuclear cell | 8.87e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.27e-36 | 114 |
blood | 5.43e-25 | 15 |
haemolymphatic fluid | 5.43e-25 | 15 |
organism substance | 5.43e-25 | 15 |
subdivision of digestive tract | 9.17e-08 | 118 |
gland of gut | 1.35e-07 | 10 |
major salivary gland | 1.45e-07 | 2 |
hemopoietic organ | 4.45e-07 | 7 |
immune organ | 4.45e-07 | 7 |