FFCP PHASE1:Hg19::chr16:1922109..1922181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254528 | |EntrezGene=254528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28569 | |HGNC=28569 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N635,C9J0S1,C9J4P9 | |UniProt=Q8N635,C9J0S1,C9J4P9 | ||
|association_with_transcript=0bp_to_ENST00000397344,ENST00000412554,ENST00000452149,ENST00000496541,NM_001163560,uc002cne.2,uc010uvq.1_5end | |association_with_transcript=0bp_to_ENST00000397344,ENST00000412554,ENST00000452149,ENST00000496541,NM_001163560,uc002cne.2,uc010uvq.1_5end | ||
|cluster_id=chr16:1922109..1922181,- | |||
|description=CAGE_peak_1_at_C16orf73_5end | |description=CAGE_peak_1_at_C16orf73_5end | ||
|id=chr16:1922109..1922181,- | |id=chr16:1922109..1922181,- | ||
|ontology_enrichment_celltype=CL:1000507!3.09e-07!12;CL:1000494!3.09e-07!12 | |ontology_enrichment_celltype=CL:1000507!3.09e-07!12;CL:1000494!3.09e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.99e-13;10!CL:1000494;1.99e-13;10!CL:0002322;2.90e-12;5!CL:1000449;7.58e-11;15!CL:1000497;2.27e-09;17!CL:0002518;2.27e-09;17!CL:0002681;1.86e-08;12!CL:0002584;1.86e-08;12!CL:0002321;3.19e-07;15!CL:0000064;3.69e-07;3!CL:0000067;3.69e-07;3!CL:0005012;3.69e-07;3!CL:0002304;3.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.32e-13,10;CL:1000494,2.32e-13,10;CL:0002322,2.94e-12,5;CL:1000449,8.53e-11,15;CL:1000497,2.51e-09,17;CL:0002518,2.51e-09,17;CL:0002681,2.18e-08,12;CL:0002584,2.18e-08,12;CL:0000064,3.78e-07,3;CL:0000067,3.78e-07,3;CL:0005012,3.78e-07,3;CL:0002304,3.78e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.08e-08;10!UBERON:0005564;1.08e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.71e-11;22!DOID:2994;2.71e-11;22!DOID:171;1.56e-08;10!DOID:8692;9.58e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.62e-11,22;DOID:2994,2.62e-11,22;DOID:162,6.57e-10,235;DOID:14566,1.78e-09,239;DOID:171,1.55e-08,10;DOID:0050687,2.54e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.96e-11!90;UBERON:0003075!2.49e-09!86;UBERON:0007284!2.49e-09!86;UBERON:0003056!3.68e-08!61;UBERON:0000924!4.62e-08!173;UBERON:0006601!4.62e-08!173;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0007625!1.56e-07!11;UBERON:0005743!1.66e-07!86;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0009773!3.09e-07!12;UBERON:0001231!3.09e-07!12;UBERON:0004810!3.09e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.99e-13;10!UBERON:0009773;1.99e-13;10!UBERON:0001231;1.99e-13;10!UBERON:0004810;1.99e-13;10!UBERON:0002113;1.26e-11;24!UBERON:0011143;1.26e-11;24!UBERON:0007625;1.89e-11;11!UBERON:0001851;2.92e-11;15!UBERON:0000473;4.48e-11;8!UBERON:0006555;7.58e-11;15!UBERON:0004819;7.58e-11;15!UBERON:0001285;7.58e-11;15!UBERON:0007684;7.58e-11;15!UBERON:0002346;3.17e-10;4!UBERON:0000923;3.17e-10;4!UBERON:0010316;3.17e-10;4!UBERON:0005291;3.17e-10;4!UBERON:0000489;3.72e-09;29!UBERON:0000488;4.32e-09;4!UBERON:0006554;9.19e-09;30!UBERON:0001008;9.19e-09;30!UBERON:0001225;1.86e-08;12!UBERON:0008987;1.86e-08;12!UBERON:0002050;3.59e-08;5!UBERON:0005423;3.59e-08;5!UBERON:0003135;7.88e-08;11!UBERON:0001778;3.69e-07;3!UBERON:0001775;3.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.32e-13,10;UBERON:0007625,1.84e-11,11;UBERON:0001851,3.45e-11,15;UBERON:0000473,4.90e-11,8;UBERON:0004211,8.53e-11,15;UBERON:0009773,8.53e-11,15;UBERON:0001231,8.53e-11,15;UBERON:0001285,8.53e-11,15;UBERON:0007684,8.53e-11,15;UBERON:0004208,8.53e-11,15;UBERON:0002113,1.72e-10,26;UBERON:0003918,1.72e-10,26;UBERON:0011143,1.72e-10,26;UBERON:0005095,1.72e-10,26;UBERON:0007687,1.72e-10,26;UBERON:0006555,5.15e-10,16;UBERON:0004819,5.15e-10,16;UBERON:0000488,4.23e-09,4;UBERON:0005172,2.12e-08,54;UBERON:0005173,2.12e-08,54;UBERON:0001225,2.18e-08,12;UBERON:0008987,2.18e-08,12;UBERON:0000489,2.26e-08,31;UBERON:0003135,8.40e-08,11;UBERON:0002417,3.57e-07,60;UBERON:0000916,3.57e-07,60;UBERON:0001778,3.78e-07,3;UBERON:0001775,3.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,1.32348744029695,1.77383517970051,2.0202000709419,13.3598657007667,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,3.28816596202542,1.94247533241758,0.702254033511242,0,0.491337269247072,0.103325781175765,0,0,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0,0.226864366320042,0.538168907066586,0,0.211931901159562,0,0.412210116953756,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0,0,0,11.9534232007003,8.21684563593209,7.90118811512725,5.28671380578389,4.28945446488568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,2.91665277507493,0,0,0,0.0925884451585296,0,0,1.44331342025273,1.39116485970092,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0.43596006883328,0.5867062865676,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,2.25599806453706,4.6979355633693,0.784349769176855,2.92278449306521,6.86085587803692,0,0,7.77297297967702,0,1.35473218771926,1.00337954770971,2.54876273045038,0.831076008928724,3.1342465661105,0.438519753291869,0.261435451024901,1.53870075069834,1.31205858279882,0.650756789328606,0.206082023295445,4.12062591682545,4.7855509953941,0,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0.275673144969061,0.107420244868274,0.435050081742686,0.426133137080504,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,40.1658507439299,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,4.68430861459359,0,50.6947261108956,44.0641932548059,43.71447512852,0.586164286206121,0,0,0,0,25.3776609158129,0,0,26.699314784893,0,0,0,0,0,0,0.844016498463076,0,0,0.422250816255987,0,0,0,0,0,1.86623752597084,0,0,21.9976119197555,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,24.9168577286911,77.5351596198831,45.1613818946319,0.291604613383254,0,0.885741385813839,0.844175070377856,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.54323685961004,0,0,0,0,0,0.498635045700469,102.194834259583,89.9927032518424,71.491996051709,103.985045532853,0,32.2827038727881,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,47.6401309946378,0,0,0,0,0.529536760149002,0.225980740780532,0,0,0.569797163602908,1.17330829640882,0,0,0,0,0,3.26030495937733,0,0,1.17847017308398,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.964518890790115,1.78801267576404,2.07720169014593,0,0,0.668245123238271,0,0,0.314727528809989,15.840050477911,0.179287339332845,0,0,0,79.0775152106272,0,0,0.326587360109409,0,0.082092520749339,0,25.1552843174679,0,1.32506888912221,0.258565912723101,0.13223260174269,0.855434189421647,0,0,0,0,0,0,0,0,0,1.0027595760908,0,0,98.9440806376476,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.248385611765534,15.7717443827303,0,0,3.42558400253961,0,0,3.04334160082733,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,46.8066187889747,0,0,0,0,49.1920776058,0,0,0,3.88716121080938,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08142859256603,0,0,0,0,0,0,10.6746563282715,0.471797825567689,0,45.8277830875868,9.77844632467741,11.7738976046052,37.9878544221806,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0.615349092722265,0,0.345786262321089,0.807378228159255,0,0,0,0,0,0,19.3300779296828,19.8916222116275,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.507326481551255,0,0,0.496211178389294,1.40696995487696,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0.203909198930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| ||
|short_description=p1@C16orf73 | |short_description=p1@C16orf73 | ||
}} | }} |
Latest revision as of 23:34, 24 September 2015
Short description: | p1@C16orf73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C16orf73_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397344, ENST00000412554, ENST00000452149, ENST00000496541, NM_001163560, uc002cne.2, uc010uvq.1_5end |
EntrezGene: | C16orf73 |
HGNC: | 28569 |
UniProt: | Q8N635C9J0S1C9J4P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.32e-13 | 10 |
nephron tubule epithelial cell | 2.32e-13 | 10 |
embryonic stem cell | 2.94e-12 | 5 |
epithelial cell of nephron | 8.53e-11 | 15 |
kidney cell | 2.51e-09 | 17 |
kidney epithelial cell | 2.51e-09 | 17 |
kidney cortical cell | 2.18e-08 | 12 |
renal cortical epithelial cell | 2.18e-08 | 12 |
ciliated cell | 3.78e-07 | 3 |
ciliated epithelial cell | 3.78e-07 | 3 |
multi-ciliated epithelial cell | 3.78e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.32e-13 | 10 |
pigment epithelium of eye | 1.84e-11 | 11 |
cortex | 3.45e-11 | 15 |
testis | 4.90e-11 | 8 |
nephron epithelium | 8.53e-11 | 15 |
renal tubule | 8.53e-11 | 15 |
nephron tubule | 8.53e-11 | 15 |
nephron | 8.53e-11 | 15 |
uriniferous tubule | 8.53e-11 | 15 |
nephrogenic mesenchyme | 8.53e-11 | 15 |
kidney | 1.72e-10 | 26 |
kidney mesenchyme | 1.72e-10 | 26 |
upper urinary tract | 1.72e-10 | 26 |
kidney rudiment | 1.72e-10 | 26 |
kidney field | 1.72e-10 | 26 |
excretory tube | 5.15e-10 | 16 |
kidney epithelium | 5.15e-10 | 16 |
atypical epithelium | 4.23e-09 | 4 |
abdomen element | 2.12e-08 | 54 |
abdominal segment element | 2.12e-08 | 54 |
cortex of kidney | 2.18e-08 | 12 |
renal parenchyma | 2.18e-08 | 12 |
cavitated compound organ | 2.26e-08 | 31 |
male reproductive organ | 8.40e-08 | 11 |
abdominal segment of trunk | 3.57e-07 | 60 |
abdomen | 3.57e-07 | 60 |
ciliary epithelium | 3.78e-07 | 3 |
ciliary body | 3.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.62e-11 | 22 |
germ cell cancer | 2.62e-11 | 22 |
cancer | 6.57e-10 | 235 |
disease of cellular proliferation | 1.78e-09 | 239 |
neuroectodermal tumor | 1.55e-08 | 10 |
cell type cancer | 2.54e-08 | 143 |