FFCP PHASE1:Hg19::chr17:59469536..59469541,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:59469536..59469541,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr17:59469536..59469541,+ | |||
|id=chr17:59469536..59469541,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.12e-17;3!CL:1000428;1.12e-17;3!CL:0002559;3.60e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.12e-17,3;CL:1000428,1.12e-17,3;CL:0002559,3.60e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.09e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.91e-111;4!DOID:1612;8.91e-111;4!DOID:299;1.02e-18;25!DOID:7;6.11e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.91e-111,4;DOID:1612,8.91e-111,4;DOID:299,1.02e-18,25;DOID:7,2.38e-12,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.18e-45;10!UBERON:0001443;4.07e-41;11!UBERON:0000412;1.12e-17;3!UBERON:0001992;1.12e-17;3!UBERON:0002073;3.60e-11;5!UBERON:0000915;1.98e-09;52!UBERON:0002067;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.18e-45,10;UBERON:0001443,4.07e-41,11;UBERON:0000412,1.12e-17,3;UBERON:0001992,1.12e-17,3;UBERON:0002073,3.60e-11,5;UBERON:0005086,3.60e-11,5;UBERON:0000915,1.73e-09,52;UBERON:0002067,8.85e-07,9;UBERON:0004016,8.85e-07,9;UBERON:0010083,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9649055510226,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,2.3438498497671,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0.345701962667338,0,0,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:59469536..59469541,+ | |||
}} |
Latest revision as of 19:35, 25 July 2015
Short description: | p@chr17:59469536..59469541, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59469536..59469541, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.12e-17 | 3 |
stem cell of epidermis | 1.12e-17 | 3 |
hair follicle cell | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
breast | 4.18e-45 | 10 |
chest | 4.07e-41 | 11 |
dermal papilla | 1.12e-17 | 3 |
papillary layer of dermis | 1.12e-17 | 3 |
hair follicle | 3.60e-11 | 5 |
hair follicle placode | 3.60e-11 | 5 |
thoracic segment of trunk | 1.73e-09 | 52 |
dermis | 8.85e-07 | 9 |
dermatome | 8.85e-07 | 9 |
future dermis | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.91e-111 | 4 |
breast cancer | 8.91e-111 | 4 |
adenocarcinoma | 1.02e-18 | 25 |
disease of anatomical entity | 2.38e-12 | 39 |