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UBERON:0005215

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Name:kidney interstitium
Definition:"A portion of interstitial tissue that is part of a kidney [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0002616

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003567(abdomen connective tissue),UBERON:0004120(mesoderm-derived structure),UBERON:0005169(interstitial tissue),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

part of:UBERON:0002319 (mesangium),CL:1000500 (kidney interstitial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005215 (kidney interstitium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.34e-79FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_01ca9060c6fbd8557dede0407c1bdf94p@chr2:133426030..133426041, -
2.34e-79FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_01ca9060c6fbd8557dede0407c1bdf94p@chr2:133426030..133426041, -
3.49e-79FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_4a56a1e5b8b62c4df33ff36fce8027b3p23@TTC39A
3.49e-79FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_4a56a1e5b8b62c4df33ff36fce8027b3p23@TTC39A
2.03e-66FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_c139f43c92cafe2fd7560586be3cf5f4p@chr2:133426106..133426117, -
2.03e-66FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_c139f43c92cafe2fd7560586be3cf5f4p@chr2:133426106..133426117, -
1.46e-50FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_22906cb64dadb69841af8870281b66a6p@chr10:134535354..134535366, -
1.46e-50FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_22906cb64dadb69841af8870281b66a6p8@PAX2
1.46e-50FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_22906cb64dadb69841af8870281b66a6p@chr10:134535354..134535366, -
1.46e-50FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_22906cb64dadb69841af8870281b66a6p8@PAX2
3.11e-50FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_b96310fc1d8b46b4315c1a4f38de8954p19@PEMT
3.11e-50FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_b96310fc1d8b46b4315c1a4f38de8954p19@PEMT
4.52e-50FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_afdab313406b8d41e97443245d764735p10@PAX2
4.52e-50FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_afdab313406b8d41e97443245d764735p@chr9:81641483..81641491, -
4.52e-50FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_afdab313406b8d41e97443245d764735p10@PAX2
4.52e-50FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_afdab313406b8d41e97443245d764735p@chr9:81641483..81641491, -
8.98e-41FFCP PHASE1:Hg19::chr17:171082..171101,+#_05dc0d3099ad71f7d8c44390ea4c680bp@chr17:171082..171101, +
8.98e-41FFCP PHASE2:Hg19::chr17:171082..171101,+#_05dc0d3099ad71f7d8c44390ea4c680bp@chr17:171082..171101, +
1.1e-40FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_41a2b7ccff4c9a2ad5730271c5b1bf2fp@chr3:172384246..172384250, +
1.1e-40FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_41a2b7ccff4c9a2ad5730271c5b1bf2fp@chr3:172384246..172384250, +
1.64e-40FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_5d8f8dff200bf10e34ad2c3e0a7f49abp@chr1:45087902..45087912, +
1.64e-40FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_5d8f8dff200bf10e34ad2c3e0a7f49abp@chr1:45087902..45087912, +
3.68e-40FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_ca3d7639ce7b43e09280b8315badffd5p5@PAX2
3.68e-40FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_ca3d7639ce7b43e09280b8315badffd5p5@PAX2
8.2e-37FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_fee0a251af2a0a3d304bd09e0d997edep6@PAX2
8.2e-37FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_fee0a251af2a0a3d304bd09e0d997edep6@PAX2
9.84e-37FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_25ca27fa5f6544b09991a1655f585671p3@CRB2
9.84e-37FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_25ca27fa5f6544b09991a1655f585671p3@CRB2
6.0e-34FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_60cd15fafd9d511d069c8c6d033e532bp@chr2:113984760..113984792, +
6.0e-34FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_60cd15fafd9d511d069c8c6d033e532bp@chr2:113984760..113984792, +
7.05e-34FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_c1d9158e1375e0d44a9061b8d50991bdp@chr7:27164585..27164612, -
7.05e-34FFCP PHASE1:Hg19::chr11:555661..555679,+#_c1d9158e1375e0d44a9061b8d50991bdp@chr11:555661..555679, +
7.05e-34FFCP PHASE1:Hg19::chr1:858638..858648,+#_c1d9158e1375e0d44a9061b8d50991bdp@chr1:858638..858648, +
7.05e-34FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_c1d9158e1375e0d44a9061b8d50991bdp@chr7:27164585..27164612, -
7.05e-34FFCP PHASE2:Hg19::chr11:555661..555679,+#_c1d9158e1375e0d44a9061b8d50991bdp@chr11:555661..555679, +
7.05e-34FFCP PHASE2:Hg19::chr1:858638..858648,+#_c1d9158e1375e0d44a9061b8d50991bdp@chr1:858638..858648, +
8.39e-34FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_d4a1b526af466afb691eed9fc0e48d5ep13@SPOCK2
8.39e-34FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_d4a1b526af466afb691eed9fc0e48d5ep13@SPOCK2
1.17e-33FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_eb59961e095ea7e530cce2176bd71683p25@PHLDB1
1.17e-33FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_eb59961e095ea7e530cce2176bd71683p25@PHLDB1
3.35e-32FFCP PHASE1:Hg19::chr2:693362..693373,+#_3219e5605607052b771e77b835a4afc8p@chr2:693362..693373, +
3.35e-32FFCP PHASE2:Hg19::chr2:693362..693373,+#_3219e5605607052b771e77b835a4afc8p@chr2:693362..693373, +
2.54e-31FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_2465b38d70f8c26dca35495451dacd76p1@RIPPLY1
2.54e-31FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_2465b38d70f8c26dca35495451dacd76p1@RIPPLY1
8.05e-30FFCP PHASE1:Hg19::chr17:171147..171161,+#_861455930ee9d24ec0feadda8d611bd2p@chr17:171147..171161, +
8.05e-30FFCP PHASE2:Hg19::chr17:171147..171161,+#_861455930ee9d24ec0feadda8d611bd2p@chr17:171147..171161, +
2.96e-29FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_6edf19a36913a3afc3a1e549ed084ab5p@chr2:165477405..165477418, -
2.96e-29FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_6edf19a36913a3afc3a1e549ed084ab5p@chr2:165477405..165477418, -
4.55e-29FFCP PHASE2:Hg19::chr1:874109..874143,+#_4d879eeb52074a0e3410a805c0a7446dp@chr1:874109..874143, +
4.55e-29FFCP PHASE1:Hg19::chr1:874109..874143,+#_4d879eeb52074a0e3410a805c0a7446dp@chr1:874109..874143, +
1.43e-28FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_f82ac557b1fb3f641f956b1407a15951p@chr2:113999199..113999214, +
1.43e-28FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_f82ac557b1fb3f641f956b1407a15951p@chr2:113999199..113999214, +
1.83e-27FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_b1884027baad4849df6f6facb4d0f274p7@LRRN4
1.83e-27FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_b1884027baad4849df6f6facb4d0f274p@chr16:86604624..86604648, +
1.83e-27FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_b1884027baad4849df6f6facb4d0f274p@chr16:86604624..86604648, +
1.83e-27FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_b1884027baad4849df6f6facb4d0f274p7@LRRN4
2.74e-27FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_37ea836b6192522b79c94aff1a59b79ep@chr19:56091499..56091517, -
2.74e-27FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_37ea836b6192522b79c94aff1a59b79ep@chr19:56091499..56091517, -
2.78e-26FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_719eef740d93bd4d01ecc0c725b550ecp@chr9:112260040..112260045, +
2.78e-26FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_719eef740d93bd4d01ecc0c725b550ecp@chr9:112260040..112260045, +
4.63e-26FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_1d4fc000ce0e17da6a27294b921f9e61p@chr22:30645170..30645182, -
4.63e-26FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_1d4fc000ce0e17da6a27294b921f9e61p@chr22:30645170..30645182, -
7.14e-26FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_70d66e3761bab352df30c2ffd277c3e2p@chr8:22419319..22419327, +
7.14e-26FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_70d66e3761bab352df30c2ffd277c3e2p@chr8:22419319..22419327, +
9.18e-26FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_5753dd723a7d4f1c7bbe748d94929280p12@TRIM16
9.18e-26FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_5753dd723a7d4f1c7bbe748d94929280p@chr8:28196820..28196830, +
9.18e-26FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_5753dd723a7d4f1c7bbe748d94929280p@chr2:176973165..176973169, -
9.18e-26FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_5753dd723a7d4f1c7bbe748d94929280p@chr20:6031540..6031548, -
9.18e-26FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_5753dd723a7d4f1c7bbe748d94929280p14@PAX2
9.18e-26FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_5753dd723a7d4f1c7bbe748d94929280p@chr6:31833005..31833017, -
9.18e-26FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_5753dd723a7d4f1c7bbe748d94929280p15@WT1
9.18e-26FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_5753dd723a7d4f1c7bbe748d94929280p12@TRIM16
9.18e-26FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_5753dd723a7d4f1c7bbe748d94929280p@chr8:28196820..28196830, +
9.18e-26FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_5753dd723a7d4f1c7bbe748d94929280p14@PAX2
9.18e-26FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_5753dd723a7d4f1c7bbe748d94929280p@chr2:176973165..176973169, -
9.18e-26FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_5753dd723a7d4f1c7bbe748d94929280p@chr20:6031540..6031548, -
9.18e-26FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_5753dd723a7d4f1c7bbe748d94929280p15@WT1
9.18e-26FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_5753dd723a7d4f1c7bbe748d94929280p@chr6:31833005..31833017, -
2.37e-25FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_6f55239a57be29d1989b42bf0c63afd7p1@ENST00000523364, p1@uc010kux.1
2.37e-25FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_6f55239a57be29d1989b42bf0c63afd7p1@ENST00000523364, p1@uc010kux.1
4.38e-25FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_d7ace7944c1226d4ec7f34ea10c70667p16@HOXA10
4.38e-25FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_d7ace7944c1226d4ec7f34ea10c70667p16@HOXA10
4.43e-25FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_24a4f9f6ae1a09aa92d7cfb928160246p6@MTMR11
4.43e-25FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_24a4f9f6ae1a09aa92d7cfb928160246p6@MTMR11
7.09e-25FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_7a5ff4ed3befe909cee1d15e160bd5a0p4@PAX2
7.09e-25FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_7a5ff4ed3befe909cee1d15e160bd5a0p4@PAX2
3.76e-24FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_99a5aff28a17109cd2ea3144502bc684p@chr1:46797583..46797614, -
3.76e-24FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_99a5aff28a17109cd2ea3144502bc684p@chr1:46797583..46797614, -
7.62e-24FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_ff84ac020faffec43840226390fc14a4p@chr6:94129519..94129544, +
7.62e-24FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_ff84ac020faffec43840226390fc14a4p@chr6:94129519..94129544, +
8.02e-24FFCP PHASE1:Hg19::chr2:693380..693398,+#_39429a22a705f690c9d0a2e9d99415c0p@chr2:693380..693398, +
8.02e-24FFCP PHASE2:Hg19::chr2:693380..693398,+#_39429a22a705f690c9d0a2e9d99415c0p@chr2:693380..693398, +
8.98e-24FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_50178d33ae0437641e1a3ae348c5c5d7p@chr2:133426077..133426103, -
8.98e-24FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_50178d33ae0437641e1a3ae348c5c5d7p@chr2:133426077..133426103, -
1.99e-23FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_67461bd5e7524b33b55b1c54c0af41bfp5@WT1-AS
1.99e-23FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_67461bd5e7524b33b55b1c54c0af41bfp5@WT1-AS
4.37e-23FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_92342aae79d2d1f586453c9cbeedd3dcp@chr2:176968471..176968476, -
4.37e-23FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_92342aae79d2d1f586453c9cbeedd3dcp@chr2:176968471..176968476, -
4.89e-23FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_962b3e749956d6655be1faf6cd14670fp1@ENST00000469884
4.89e-23FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_962b3e749956d6655be1faf6cd14670fp1@ENST00000469884