FFCP PHASE1:Mm9::chr14:104863873..104863879,-: Difference between revisions
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|id=chr14:104863873..104863879,- | |id=chr14:104863873..104863879,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.69e-14,3;CL:0002612,4.91e-14,3;CL:0000117,3.46e-11,23;CL:0000337,3.46e-11,23;CL:0000540,1.82e-07,33;CL:0000047,1.82e-07,33;CL:0000031,1.82e-07,33;CL:0000404,1.82e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.84e-08!9;UBERON:0000019!1.84e-08!9;UBERON:0000047!1.84e-08!9;UBERON:0004088!1.84e-08!9;UBERON:0002104!1.84e-08!9;UBERON:0001456!1.84e-08!9;UBERON:0003072!1.84e-08!9;UBERON:0003071!1.84e-08!9;UBERON:0004128!1.84e-08!9;UBERON:0000020!9.57e-08!12;UBERON:0001032!9.57e-08!12;UBERON:0004456!9.57e-08!12;UBERON:0001444!1.39e-07!11 | |ontology_enrichment_uberon=UBERON:0000970!1.84e-08!9;UBERON:0000019!1.84e-08!9;UBERON:0000047!1.84e-08!9;UBERON:0004088!1.84e-08!9;UBERON:0002104!1.84e-08!9;UBERON:0001456!1.84e-08!9;UBERON:0003072!1.84e-08!9;UBERON:0003071!1.84e-08!9;UBERON:0004128!1.84e-08!9;UBERON:0000020!9.57e-08!12;UBERON:0001032!9.57e-08!12;UBERON:0004456!9.57e-08!12;UBERON:0001444!1.39e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,4.91e-14,3;UBERON:0000970,3.29e-12,9;UBERON:0000019,3.29e-12,9;UBERON:0000047,3.29e-12,9;UBERON:0010312,3.29e-12,9;UBERON:0004088,3.29e-12,9;UBERON:0002104,3.29e-12,9;UBERON:0001456,3.29e-12,9;UBERON:0003072,3.29e-12,9;UBERON:0004128,3.29e-12,9;UBERON:0003071,3.29e-12,9;UBERON:0002346,8.82e-11,64;UBERON:0003075,8.82e-11,64;UBERON:0007284,8.82e-11,64;UBERON:0004121,2.03e-10,95;UBERON:0000924,2.03e-10,95;UBERON:0006601,2.03e-10,95;UBERON:0001444,5.96e-10,11;UBERON:0010371,3.73e-09,73;UBERON:0000020,4.20e-09,12;UBERON:0001032,4.20e-09,12;UBERON:0004456,4.20e-09,12;UBERON:0003056,1.06e-08,49;UBERON:0001948,1.30e-08,5;UBERON:0002315,1.30e-08,5;UBERON:0000033,2.20e-08,13;UBERON:0005085,2.20e-08,13;UBERON:0002240,3.03e-07,6;UBERON:0005174,3.03e-07,6;UBERON:0001137,3.03e-07,6;UBERON:0010314,9.19e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,3.70293685490423,7.60597684207415,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.883474163806454,0,0.0958454710182364,0,0,0.383062014255563,0,0.791317726381163,1.82975287204819,1.04182674111352,0,0,0.15279824777681,2.65165726926301,4.27115042397309,6.71038004971082,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.494389935468748,0,0,0,0.441683036920787,0,0,0,0,0.510914110417183,0,0,0,1.64769703345305,0,0,0,0,0,0.324482526135515,0.101839363850316,0,0.252722758433675,0.210441855886474,0.780722657776222,0.919608417733892,3.78130472591233,5.27466862425003,4.83059143974428,3.97152532883034,2.62364828767241,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,1.00988370881749,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,1.42695054081656,1.48094118541909,2.43571959291679,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.838874755405687,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69847103718859,1.19707462020309,0.853668028770671,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.565879024158229,0.561849044819294,0.256100609619477,0.114870937911227,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.365855945745545,0.789209134313529,0,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,3.70293685490423,7.60597684207415,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.883474163806454,0,0.0958454710182364,0,0,0.383062014255563,0,0.791317726381163,1.82975287204819,1.04182674111352,0,0,0.15279824777681,2.65165726926301,4.27115042397309,6.71038004971082,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.494389935468748,0,0,0,0.441683036920787,0,0,0,0,0.510914110417183,0,0,0,1.64769703345305,0,0,0,0,0,0.324482526135515,0.101839363850316,0,0.252722758433675,0.210441855886474,0.780722657776222,0.919608417733892,3.78130472591233,5.27466862425003,4.83059143974428,3.97152532883034,2.62364828767241,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,1.00988370881749,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,1.42695054081656,1.48094118541909,2.43571959291679,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.838874755405687,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69847103718859,1.19707462020309,0.853668028770671,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.565879024158229,0.561849044819294,0.256100609619477,0.114870937911227,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.365855945745545,0.789209134313529,0,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr14:104863873..104863879,- | |short_description=p@chr14:104863873..104863879,- | ||
}} | }} |
Revision as of 18:16, 13 November 2012
Short description: | p@chr14:104863873..104863879, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:104863873..104863879, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.69e-14 | 3 |
neuron of the ventral spinal cord | 4.91e-14 | 3 |
CNS neuron (sensu Vertebrata) | 3.46e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.46e-11 | 23 |
neuron | 1.82e-07 | 33 |
neuronal stem cell | 1.82e-07 | 33 |
neuroblast | 1.82e-07 | 33 |
electrically signaling cell | 1.82e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 4.91e-14 | 3 |
eye | 3.29e-12 | 9 |
camera-type eye | 3.29e-12 | 9 |
simple eye | 3.29e-12 | 9 |
immature eye | 3.29e-12 | 9 |
ocular region | 3.29e-12 | 9 |
visual system | 3.29e-12 | 9 |
face | 3.29e-12 | 9 |
optic cup | 3.29e-12 | 9 |
optic vesicle | 3.29e-12 | 9 |
eye primordium | 3.29e-12 | 9 |
neurectoderm | 8.82e-11 | 64 |
neural plate | 8.82e-11 | 64 |
presumptive neural plate | 8.82e-11 | 64 |
ectoderm-derived structure | 2.03e-10 | 95 |
ectoderm | 2.03e-10 | 95 |
presumptive ectoderm | 2.03e-10 | 95 |
subdivision of head | 5.96e-10 | 11 |
ecto-epithelium | 3.73e-09 | 73 |
sense organ | 4.20e-09 | 12 |
sensory system | 4.20e-09 | 12 |
entire sense organ system | 4.20e-09 | 12 |
pre-chordal neural plate | 1.06e-08 | 49 |
regional part of spinal cord | 1.30e-08 | 5 |
gray matter of spinal cord | 1.30e-08 | 5 |
head | 2.20e-08 | 13 |
ectodermal placode | 2.20e-08 | 13 |
spinal cord | 3.03e-07 | 6 |
dorsal region element | 3.03e-07 | 6 |
dorsum | 3.03e-07 | 6 |
structure with developmental contribution from neural crest | 9.19e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.