FFCP PHASE1:Mm9::chr13:89680450..89680470,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:89680450..89680470,+ | |id=chr13:89680450..89680470,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!2.02e-09!13;UBERON:0004708!2.02e-09!13;UBERON:0002101!2.02e-09!13;UBERON:0004357!2.02e-09!13;UBERON:0009872!2.02e-09!13;UBERON:0004347!2.02e-09!13;UBERON:0005732!2.02e-09!13;UBERON:0005733!2.02e-09!13;UBERON:0002048!6.94e-07!14;UBERON:0000117!6.94e-07!14;UBERON:0000171!6.94e-07!14;UBERON:0000170!6.94e-07!14;UBERON:0005597!6.94e-07!14;UBERON:0000118!6.94e-07!14 | |ontology_enrichment_uberon=UBERON:0000026!2.02e-09!13;UBERON:0004708!2.02e-09!13;UBERON:0002101!2.02e-09!13;UBERON:0004357!2.02e-09!13;UBERON:0009872!2.02e-09!13;UBERON:0004347!2.02e-09!13;UBERON:0005732!2.02e-09!13;UBERON:0005733!2.02e-09!13;UBERON:0002048!6.94e-07!14;UBERON:0000117!6.94e-07!14;UBERON:0000171!6.94e-07!14;UBERON:0000170!6.94e-07!14;UBERON:0005597!6.94e-07!14;UBERON:0000118!6.94e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,2.16e-11,12;UBERON:0004708,2.16e-11,12;UBERON:0002101,2.16e-11,12;UBERON:0004357,2.16e-11,12;UBERON:0004347,2.16e-11,12;UBERON:0005732,2.16e-11,12;UBERON:0005733,2.16e-11,12;UBERON:0010707,2.19e-11,13;UBERON:0002048,1.37e-07,14;UBERON:0000117,1.37e-07,14;UBERON:0000171,1.37e-07,14;UBERON:0000170,1.37e-07,14;UBERON:0005597,1.37e-07,14;UBERON:0000118,1.37e-07,14;UBERON:0003102,2.43e-07,22;UBERON:0010708,4.66e-07,8;UBERON:0002102,4.75e-07,7;UBERON:0004710,4.75e-07,7;UBERON:0005419,4.75e-07,7;UBERON:0005417,4.75e-07,7;UBERON:0005729,4.75e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0.633831403506179,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0,0.311068836925433,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,1.28134512719193,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,0,0,0,1.02765491747154,2.07150306917737,2.9688427812965,2.25530924795977,2.74018930480927,3.68984795609694,3.3158980921577,3.52766121407114,3.89566433121994,0.247194967734374,0,18.5768215909474,433.696924709004,254.630270784834,407.295212633587,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,1.52759045775474,193.577246269305,0,0.420883711772948,5.72529949035896,1.14951052216736,1.0803727788321,0.452114453507145,1.49680298132921,0.2562274405697,0.281105173679186,0,5.38919982332106,17.3977593754394,74.6032766455143,184.562806704018,116.501797425526,202.334508749379,186.644397722005,4.97585667046233,0,0,0,137.531512963573,77.6281258537428,31.6909228171386,17.5191104333056,6.88674811115913,4.31947916084659,2.09280550275367,1.87791380979733,1.75148013550754,1.31647879930784,0.492502392237286,0.405344047729279,0.438599962275997,0.658650345873152,1.07365135008297,0,0,0,0,5.33220626338085,3.0190767341857,2.96395161040815,1.00841762311671,1.55664630691409,0.570676878337677,0,0,0,0.198956472041151,0,0,0,0.199141273254367,4.1726938209678,5.71242563048644,11.270773567308,5.29493452397817,4.46090720485539,2.45475369616115,2.84564417059158,0.590440591918409,0.470996183524124,0,0,3.50374722003798,0.196558995113203,0,0,0,0,1.43848068725405,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0.358794827043824,0,0.369506380333209,15.1593129416388,27.5410810187024,22.9155865796504,16.8976978767722,15.410575684647,26.6608877792335,14.6350235893349,8.03939234941574,7.30833475840957,2.39182152986231,4.58817281204066,2.76295970985433,2.4590339958857,0,0,0,0,0.321101179975584,0,0,44.1824122607653,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,1.06839362200353,1.62886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0.188605079755898,3.83892460745005,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,5.10659408630682,6.66226047915848,0.905510786479282,7.28745919107414,1.41872186913819,3.38900753443934,3.9491764944509,0.913394847343798,3.52007562095566,0.21183207086382,0,0,2.74489525383039,10.9769523369244,3.46179797609096,2.29797259643086,0,0,0,3.30218988741156,6.11141940320049,0,0,0.228778173206523,0.169978429993855,0,0,0,2.37251995185852,1.42323626988794,0.540026704109006,0.836353184057875,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,2.8408143748356,2.64733584731356,1.16670713006429,0.645799117388655,0.168956125490778,0.234714477291508,0,0,0,0,0,0.608175645870493,1.23253148597793,0,1.07416017400489,0.993406773906324,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,0.772758376128762,0,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,3.42498247027783,8.77854721482268,43.3663358615501,114.503263739166,38.3592087609208,22.0612210140017,4.00044110042907,5.97501665992793,5.13470735346904,6.31743029409494,6.08350319736575,4.14977951049368,4.96299989590377,5.05798703998467,4.36509564062661,1.42888107384922,5.56244764535306,3.08654752741928,5.35711671044299,5.88795680537589,5.14303878578123,4.08194354166476,3.09967046931517,4.50573891560218,5.64656282491984,4.99226186560891,4.93905526756486,4.99832451731901,4.48153575691344,6.17256498823512,5.21994079746366,5.1222330835293,5.32000356120596,5.26785260032284,91.6306402160422,42.2179876715129,61.7579446295878,72.8412873223731,286.741209771196,236.474001296121,313.48531375881 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0.633831403506179,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0,0.311068836925433,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,1.28134512719193,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,0,0,0,1.02765491747154,2.07150306917737,2.9688427812965,2.25530924795977,2.74018930480927,3.68984795609694,3.3158980921577,3.52766121407114,3.89566433121994,0.247194967734374,0,18.5768215909474,433.696924709004,254.630270784834,407.295212633587,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,1.52759045775474,193.577246269305,0,0.420883711772948,5.72529949035896,1.14951052216736,1.0803727788321,0.452114453507145,1.49680298132921,0.2562274405697,0.281105173679186,0,5.38919982332106,17.3977593754394,74.6032766455143,184.562806704018,116.501797425526,202.334508749379,186.644397722005,4.97585667046233,0,0,0,137.531512963573,77.6281258537428,31.6909228171386,17.5191104333056,6.88674811115913,4.31947916084659,2.09280550275367,1.87791380979733,1.75148013550754,1.31647879930784,0.492502392237286,0.405344047729279,0.438599962275997,0.658650345873152,1.07365135008297,0,0,0,0,5.33220626338085,3.0190767341857,2.96395161040815,1.00841762311671,1.55664630691409,0.570676878337677,0,0,0,0.198956472041151,0,0,0,0.199141273254367,4.1726938209678,5.71242563048644,11.270773567308,5.29493452397817,4.46090720485539,2.45475369616115,2.84564417059158,0.590440591918409,0.470996183524124,0,0,3.50374722003798,0.196558995113203,0,0,0,0,1.43848068725405,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0.358794827043824,0,0.369506380333209,15.1593129416388,27.5410810187024,22.9155865796504,16.8976978767722,15.410575684647,26.6608877792335,14.6350235893349,8.03939234941574,7.30833475840957,2.39182152986231,4.58817281204066,2.76295970985433,2.4590339958857,0,0,0,0,0.321101179975584,0,0,44.1824122607653,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,1.06839362200353,1.62886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0.188605079755898,3.83892460745005,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,5.10659408630682,6.66226047915848,0.905510786479282,7.28745919107414,1.41872186913819,3.38900753443934,3.9491764944509,0.913394847343798,3.52007562095566,0.21183207086382,0,0,2.74489525383039,10.9769523369244,3.46179797609096,2.29797259643086,0,0,0,3.30218988741156,6.11141940320049,0,0,0.228778173206523,0.169978429993855,0,0,0,2.37251995185852,1.42323626988794,0.540026704109006,0.836353184057875,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,2.8408143748356,2.64733584731356,1.16670713006429,0.645799117388655,0.168956125490778,0.234714477291508,0,0,0,0,0,0.608175645870493,1.23253148597793,0,1.07416017400489,0.993406773906324,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,0.772758376128762,0,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,3.42498247027783,8.77854721482268,43.3663358615501,114.503263739166,38.3592087609208,22.0612210140017,4.00044110042907,5.97501665992793,5.13470735346904,6.31743029409494,6.08350319736575,4.14977951049368,4.96299989590377,5.05798703998467,4.36509564062661,1.42888107384922,5.56244764535306,3.08654752741928,5.35711671044299,5.88795680537589,5.14303878578123,4.08194354166476,3.09967046931517,4.50573891560218,5.64656282491984,4.99226186560891,4.93905526756486,4.99832451731901,4.48153575691344,6.17256498823512,5.21994079746366,5.1222330835293,5.32000356120596,5.26785260032284,91.6306402160422,42.2179876715129,61.7579446295878,72.8412873223731,286.741209771196,236.474001296121,313.48531375881 | ||
|short_description=p1@Hapln1 | |short_description=p1@Hapln1 | ||
}} | }} |
Revision as of 19:40, 13 November 2012
Short description: | p1@Hapln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hapln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:225 |
Association with transcript: | 209bp_to_ENSMUST00000022108, NM_013500, uc007rjf.2_5end |
EntrezGene: | Hapln1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 2.16e-11 | 12 |
paired limb/fin | 2.16e-11 | 12 |
limb | 2.16e-11 | 12 |
paired limb/fin bud | 2.16e-11 | 12 |
limb bud | 2.16e-11 | 12 |
limb/fin field | 2.16e-11 | 12 |
limb field | 2.16e-11 | 12 |
appendage girdle complex | 2.19e-11 | 13 |
lung | 1.37e-07 | 14 |
respiratory tube | 1.37e-07 | 14 |
respiration organ | 1.37e-07 | 14 |
pair of lungs | 1.37e-07 | 14 |
lung primordium | 1.37e-07 | 14 |
lung bud | 1.37e-07 | 14 |
surface structure | 2.43e-07 | 22 |
pectoral complex | 4.66e-07 | 8 |
forelimb | 4.75e-07 | 7 |
pectoral appendage | 4.75e-07 | 7 |
pectoral appendage bud | 4.75e-07 | 7 |
forelimb bud | 4.75e-07 | 7 |
forelimb/pectoral fin field | 4.75e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.