FFCP PHASE1:Mm9::chr3:14864057..14864071,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:14864057..14864071,- | |id=chr3:14864057..14864071,- | ||
|ontology_enrichment_celltype=CL:0000181!2.00e-08!5;CL:0000417!2.00e-08!5;CL:0000668!2.00e-08!5;CL:0000412!2.00e-08!5;CL:0000182!2.00e-08!5 | |ontology_enrichment_celltype=CL:0000181!2.00e-08!5;CL:0000417!2.00e-08!5;CL:0000668!2.00e-08!5;CL:0000412!2.00e-08!5;CL:0000182!2.00e-08!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.57e-18,5;CL:0000057,2.75e-07,1;CL:0000632,2.75e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.85e-32!22;UBERON:0007499!4.85e-32!22;UBERON:0006925!4.85e-32!22;UBERON:0009497!4.85e-32!22;UBERON:0000015!4.85e-32!22;UBERON:0002423!4.85e-32!22;UBERON:0006235!4.85e-32!22;UBERON:0008835!4.85e-32!22;UBERON:0003894!4.85e-32!22;UBERON:0004161!4.85e-32!22;UBERON:0008836!4.85e-32!22;UBERON:0009854!1.92e-30!23;UBERON:0009856!1.92e-30!23;UBERON:0002365!1.24e-27!25;UBERON:0002330!1.24e-27!25;UBERON:0003914!7.95e-16!47;UBERON:0005172!6.37e-15!49;UBERON:0005173!6.37e-15!49;UBERON:0002417!6.37e-15!49;UBERON:0000916!6.37e-15!49;UBERON:0005256!3.78e-14!47;UBERON:0005057!1.35e-12!51;UBERON:0003929!4.42e-10!55;UBERON:0002368!4.58e-10!60;UBERON:0009569!8.25e-10!66;UBERON:0002530!6.13e-09!65;UBERON:0002405!6.25e-08!70;UBERON:0000490!1.10e-07!66;UBERON:0000949!1.24e-07!72;UBERON:0005911!3.62e-07!69 | |ontology_enrichment_uberon=UBERON:0002107!4.85e-32!22;UBERON:0007499!4.85e-32!22;UBERON:0006925!4.85e-32!22;UBERON:0009497!4.85e-32!22;UBERON:0000015!4.85e-32!22;UBERON:0002423!4.85e-32!22;UBERON:0006235!4.85e-32!22;UBERON:0008835!4.85e-32!22;UBERON:0003894!4.85e-32!22;UBERON:0004161!4.85e-32!22;UBERON:0008836!4.85e-32!22;UBERON:0009854!1.92e-30!23;UBERON:0009856!1.92e-30!23;UBERON:0002365!1.24e-27!25;UBERON:0002330!1.24e-27!25;UBERON:0003914!7.95e-16!47;UBERON:0005172!6.37e-15!49;UBERON:0005173!6.37e-15!49;UBERON:0002417!6.37e-15!49;UBERON:0000916!6.37e-15!49;UBERON:0005256!3.78e-14!47;UBERON:0005057!1.35e-12!51;UBERON:0003929!4.42e-10!55;UBERON:0002368!4.58e-10!60;UBERON:0009569!8.25e-10!66;UBERON:0002530!6.13e-09!65;UBERON:0002405!6.25e-08!70;UBERON:0000490!1.10e-07!66;UBERON:0000949!1.24e-07!72;UBERON:0005911!3.62e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.10e-41,22;UBERON:0007499,3.10e-41,22;UBERON:0006925,3.10e-41,22;UBERON:0009497,3.10e-41,22;UBERON:0000015,3.10e-41,22;UBERON:0002423,3.10e-41,22;UBERON:0006235,3.10e-41,22;UBERON:0008835,3.10e-41,22;UBERON:0003894,3.10e-41,22;UBERON:0004161,3.10e-41,22;UBERON:0008836,3.10e-41,22;UBERON:0009854,2.22e-39,23;UBERON:0009856,2.22e-39,23;UBERON:0002365,4.12e-36,25;UBERON:0002330,4.12e-36,25;UBERON:0003914,1.80e-21,47;UBERON:0005256,2.28e-19,45;UBERON:0005172,1.18e-17,49;UBERON:0005173,1.18e-17,49;UBERON:0002417,1.18e-17,49;UBERON:0000916,1.18e-17,49;UBERON:0003929,1.52e-15,55;UBERON:0002368,4.14e-14,60;UBERON:0003104,7.53e-14,61;UBERON:0009142,7.53e-14,61;UBERON:0002530,6.83e-13,65;UBERON:0000490,1.14e-12,66;UBERON:0009569,1.14e-12,66;UBERON:0005911,4.81e-12,69;UBERON:0000949,1.81e-11,72;UBERON:0005177,2.69e-10,79;UBERON:0001041,3.81e-10,80;UBERON:0002100,8.10e-09,90;UBERON:0000025,9.01e-08,114;UBERON:0004111,3.93e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1148356943485,6.11974200336975,12.9528765993076,10.3964226791627,17.4730485967961,6.31999890592883,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.29688427812965,0,0,0,0,0,0,0,1.3013942122792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6410417773619,0,0,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.162135226775035,1.37280706594041,4.31304619582064,5.58211421502755,4.36852742360385,10.8608917517258,24.577445652502,12.0610880340842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1148356943485,6.11974200336975,12.9528765993076,10.3964226791627,17.4730485967961,6.31999890592883,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.29688427812965,0,0,0,0,0,0,0,1.3013942122792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6410417773619,0,0,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.162135226775035,1.37280706594041,4.31304619582064,5.58211421502755,4.36852742360385,10.8608917517258,24.577445652502,12.0610880340842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr3:14864057..14864071,- | |short_description=p@chr3:14864057..14864071,- | ||
}} | }} |
Revision as of 10:13, 14 November 2012
Short description: | p@chr3:14864057..14864071, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:14864057..14864071, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.57e-18 | 5 |
fibroblast | 2.75e-07 | 1 |
hepatic stellate cell | 2.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 3.10e-41 | 22 |
epithelial sac | 3.10e-41 | 22 |
digestive gland | 3.10e-41 | 22 |
epithelium of foregut-midgut junction | 3.10e-41 | 22 |
anatomical boundary | 3.10e-41 | 22 |
hepatobiliary system | 3.10e-41 | 22 |
foregut-midgut junction | 3.10e-41 | 22 |
hepatic diverticulum | 3.10e-41 | 22 |
liver primordium | 3.10e-41 | 22 |
septum transversum | 3.10e-41 | 22 |
liver bud | 3.10e-41 | 22 |
digestive tract diverticulum | 2.22e-39 | 23 |
sac | 2.22e-39 | 23 |
exocrine gland | 4.12e-36 | 25 |
exocrine system | 4.12e-36 | 25 |
epithelial tube | 1.80e-21 | 47 |
trunk mesenchyme | 2.28e-19 | 45 |
abdomen element | 1.18e-17 | 49 |
abdominal segment element | 1.18e-17 | 49 |
abdominal segment of trunk | 1.18e-17 | 49 |
abdomen | 1.18e-17 | 49 |
gut epithelium | 1.52e-15 | 55 |
endocrine gland | 4.14e-14 | 60 |
mesenchyme | 7.53e-14 | 61 |
entire embryonic mesenchyme | 7.53e-14 | 61 |
gland | 6.83e-13 | 65 |
unilaminar epithelium | 1.14e-12 | 66 |
subdivision of trunk | 1.14e-12 | 66 |
endo-epithelium | 4.81e-12 | 69 |
endocrine system | 1.81e-11 | 72 |
trunk region element | 2.69e-10 | 79 |
foregut | 3.81e-10 | 80 |
trunk | 8.10e-09 | 90 |
tube | 9.01e-08 | 114 |
anatomical conduit | 3.93e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.