FFCP PHASE1:Mm9::chr11:102966069..102966082,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:102966069..102966082,+ | |id=chr11:102966069..102966082,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.13e-16!9;CL:0002251!2.13e-16!9;CL:0000239!3.36e-12!6;CL:0000677!3.36e-12!6;CL:0000212!3.36e-12!6;CL:0000584!3.36e-12!6;CL:0000075!2.62e-10!7;CL:0002076!5.20e-09!15;CL:0000066!6.15e-09!25;CL:0000473!3.41e-07!3;CL:0000627!3.41e-07!3;CL:0000682!3.41e-07!3 | |ontology_enrichment_celltype=CL:0002563!2.13e-16!9;CL:0002251!2.13e-16!9;CL:0000239!3.36e-12!6;CL:0000677!3.36e-12!6;CL:0000212!3.36e-12!6;CL:0000584!3.36e-12!6;CL:0000075!2.62e-10!7;CL:0002076!5.20e-09!15;CL:0000066!6.15e-09!25;CL:0000473!3.41e-07!3;CL:0000627!3.41e-07!3;CL:0000682!3.41e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.63e-21,6;CL:0000677,1.63e-21,6;CL:0000584,1.63e-21,6;CL:0002563,1.09e-18,9;CL:0002251,1.09e-18,9;CL:0000075,2.31e-18,7;CL:0000066,6.85e-13,25;CL:0000682,3.94e-12,3;CL:0002076,7.38e-11,15;CL:0000223,6.45e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.17e-27!15;UBERON:0001242!4.90e-23!13;UBERON:0000060!4.90e-23!13;UBERON:0001262!4.90e-23!13;UBERON:0004786!4.90e-23!13;UBERON:0004923!1.02e-21!24;UBERON:0000160!1.90e-21!43;UBERON:0005409!3.52e-19!59;UBERON:0003350!2.13e-16!9;UBERON:0004808!2.13e-16!9;UBERON:0001277!2.13e-16!9;UBERON:0000485!4.93e-13!11;UBERON:0001007!1.61e-11!128;UBERON:0001555!1.61e-11!128;UBERON:0007026!1.61e-11!128;UBERON:0004119!3.39e-11!130;UBERON:0000925!3.39e-11!130;UBERON:0006595!3.39e-11!130;UBERON:0004921!7.13e-10!126;UBERON:0004185!7.13e-10!126 | |ontology_enrichment_uberon=UBERON:0000344!9.17e-27!15;UBERON:0001242!4.90e-23!13;UBERON:0000060!4.90e-23!13;UBERON:0001262!4.90e-23!13;UBERON:0004786!4.90e-23!13;UBERON:0004923!1.02e-21!24;UBERON:0000160!1.90e-21!43;UBERON:0005409!3.52e-19!59;UBERON:0003350!2.13e-16!9;UBERON:0004808!2.13e-16!9;UBERON:0001277!2.13e-16!9;UBERON:0000485!4.93e-13!11;UBERON:0001007!1.61e-11!128;UBERON:0001555!1.61e-11!128;UBERON:0007026!1.61e-11!128;UBERON:0004119!3.39e-11!130;UBERON:0000925!3.39e-11!130;UBERON:0006595!3.39e-11!130;UBERON:0004921!7.13e-10!126;UBERON:0004185!7.13e-10!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-40,31;UBERON:0000344,1.60e-37,15;UBERON:0001242,9.72e-31,13;UBERON:0001262,9.72e-31,13;UBERON:0004786,9.72e-31,13;UBERON:0005409,1.83e-25,47;UBERON:0004923,1.58e-22,24;UBERON:0003350,1.09e-18,9;UBERON:0004808,1.09e-18,9;UBERON:0001277,1.09e-18,9;UBERON:0000485,3.93e-15,11;UBERON:0002108,9.42e-14,4;UBERON:0001007,1.18e-11,116;UBERON:0001555,1.18e-11,116;UBERON:0007026,1.18e-11,116;UBERON:0004119,2.20e-11,118;UBERON:0000925,2.20e-11,118;UBERON:0006595,2.20e-11,118;UBERON:0000331,7.77e-11,3;UBERON:0002116,7.77e-11,3;UBERON:0001204,7.77e-11,3;UBERON:0001168,7.77e-11,3;UBERON:0004921,2.45e-09,114;UBERON:0001962,1.92e-08,2;UBERON:0001961,1.92e-08,2;UBERON:0001744,1.92e-08,2 | |||
|phase1_expression=0,11.5161884520989,4.54999239389536,3.62957053568196,4.50806156951712,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,3.89995777814189,8.03924749761028,8.18447792702242,5.17130958446134,1.33016393619462,3.02436155711917,2.66076612786366,0,0,0,0.288851619751275,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.32225283331772,0,0,0,0,0,0.190225626112559,3.79623249235609,1.97638745668813,1.00534083520108,0.397912944082302,1.16978452271472,2.69645822596266,1.72910439899755,2.58883655230677,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0.899448449539415,1.21716072833102,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,11.5161884520989,4.54999239389536,3.62957053568196,4.50806156951712,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,3.89995777814189,8.03924749761028,8.18447792702242,5.17130958446134,1.33016393619462,3.02436155711917,2.66076612786366,0,0,0,0.288851619751275,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.32225283331772,0,0,0,0,0,0.190225626112559,3.79623249235609,1.97638745668813,1.00534083520108,0.397912944082302,1.16978452271472,2.69645822596266,1.72910439899755,2.58883655230677,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0.899448449539415,1.21716072833102,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p8@Acbd4 | |short_description=p8@Acbd4 | ||
}} | }} |
Revision as of 10:18, 14 November 2012
Short description: | p8@Acbd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Acbd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 50bp_to_ENSMUST00000150780_5end |
EntrezGene: | Acbd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.63e-21 | 6 |
gut absorptive cell | 1.63e-21 | 6 |
enterocyte | 1.63e-21 | 6 |
intestinal epithelial cell | 1.09e-18 | 9 |
epithelial cell of alimentary canal | 1.09e-18 | 9 |
columnar/cuboidal epithelial cell | 2.31e-18 | 7 |
epithelial cell | 6.85e-13 | 25 |
M cell of gut | 3.94e-12 | 3 |
endo-epithelial cell | 7.38e-11 | 15 |
endodermal cell | 6.45e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.69e-40 | 31 |
mucosa | 1.60e-37 | 15 |
intestinal mucosa | 9.72e-31 | 13 |
wall of intestine | 9.72e-31 | 13 |
gastrointestinal system mucosa | 9.72e-31 | 13 |
gastrointestinal system | 1.83e-25 | 47 |
organ component layer | 1.58e-22 | 24 |
epithelium of mucosa | 1.09e-18 | 9 |
gastrointestinal system epithelium | 1.09e-18 | 9 |
intestinal epithelium | 1.09e-18 | 9 |
simple columnar epithelium | 3.93e-15 | 11 |
small intestine | 9.42e-14 | 4 |
digestive system | 1.18e-11 | 116 |
digestive tract | 1.18e-11 | 116 |
primitive gut | 1.18e-11 | 116 |
endoderm-derived structure | 2.20e-11 | 118 |
endoderm | 2.20e-11 | 118 |
presumptive endoderm | 2.20e-11 | 118 |
ileal mucosa | 7.77e-11 | 3 |
ileum | 7.77e-11 | 3 |
mucosa of small intestine | 7.77e-11 | 3 |
wall of small intestine | 7.77e-11 | 3 |
subdivision of digestive tract | 2.45e-09 | 114 |
gut-associated lymphoid tissue | 1.92e-08 | 2 |
mucosa-associated lymphoid tissue | 1.92e-08 | 2 |
lymphoid tissue | 1.92e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.