FFCP PHASE1:Mm9::chr11:21901846..21901849,+: Difference between revisions
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|id=chr11:21901846..21901849,+ | |id=chr11:21901846..21901849,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.64e-12,3;CL:0002202,1.64e-12,3;CL:0000069,1.64e-12,3;CL:0002632,1.64e-12,3;CL:0002368,1.64e-12,3;CL:0000307,1.64e-12,3;CL:0000377,1.64e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.02e-22!49;UBERON:0000033!4.68e-18!63;UBERON:0000153!1.48e-14!94;UBERON:0002780!9.52e-14!39;UBERON:0001890!9.52e-14!39;UBERON:0006240!9.52e-14!39;UBERON:0003080!3.34e-13!40;UBERON:0007811!1.45e-12!86;UBERON:0000970!4.47e-12!9;UBERON:0000019!4.47e-12!9;UBERON:0000047!4.47e-12!9;UBERON:0004088!4.47e-12!9;UBERON:0002104!4.47e-12!9;UBERON:0001456!4.47e-12!9;UBERON:0003072!4.47e-12!9;UBERON:0003071!4.47e-12!9;UBERON:0004128!4.47e-12!9;UBERON:0002346!5.35e-12!71;UBERON:0003075!5.35e-12!71;UBERON:0007284!5.35e-12!71;UBERON:0002791!8.11e-12!29;UBERON:0003528!8.11e-12!29;UBERON:0001893!8.11e-12!29;UBERON:0000020!1.13e-11!12;UBERON:0001032!1.13e-11!12;UBERON:0004456!1.13e-11!12;UBERON:0001444!3.09e-11!11;UBERON:0002616!2.79e-10!49;UBERON:0000955!6.41e-10!50;UBERON:0006238!6.41e-10!50;UBERON:0002020!3.40e-09!34;UBERON:0004121!4.24e-09!102;UBERON:0000924!4.24e-09!102;UBERON:0006601!4.24e-09!102;UBERON:0005085!7.27e-09!13;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0001049!2.14e-08!52;UBERON:0005068!2.14e-08!52;UBERON:0006241!2.14e-08!52;UBERON:0007135!2.14e-08!52 | |ontology_enrichment_uberon=UBERON:0003056!2.02e-22!49;UBERON:0000033!4.68e-18!63;UBERON:0000153!1.48e-14!94;UBERON:0002780!9.52e-14!39;UBERON:0001890!9.52e-14!39;UBERON:0006240!9.52e-14!39;UBERON:0003080!3.34e-13!40;UBERON:0007811!1.45e-12!86;UBERON:0000970!4.47e-12!9;UBERON:0000019!4.47e-12!9;UBERON:0000047!4.47e-12!9;UBERON:0004088!4.47e-12!9;UBERON:0002104!4.47e-12!9;UBERON:0001456!4.47e-12!9;UBERON:0003072!4.47e-12!9;UBERON:0003071!4.47e-12!9;UBERON:0004128!4.47e-12!9;UBERON:0002346!5.35e-12!71;UBERON:0003075!5.35e-12!71;UBERON:0007284!5.35e-12!71;UBERON:0002791!8.11e-12!29;UBERON:0003528!8.11e-12!29;UBERON:0001893!8.11e-12!29;UBERON:0000020!1.13e-11!12;UBERON:0001032!1.13e-11!12;UBERON:0004456!1.13e-11!12;UBERON:0001444!3.09e-11!11;UBERON:0002616!2.79e-10!49;UBERON:0000955!6.41e-10!50;UBERON:0006238!6.41e-10!50;UBERON:0002020!3.40e-09!34;UBERON:0004121!4.24e-09!102;UBERON:0000924!4.24e-09!102;UBERON:0006601!4.24e-09!102;UBERON:0005085!7.27e-09!13;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0001049!2.14e-08!52;UBERON:0005068!2.14e-08!52;UBERON:0006241!2.14e-08!52;UBERON:0007135!2.14e-08!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.26e-26,9;UBERON:0000019,3.26e-26,9;UBERON:0000047,3.26e-26,9;UBERON:0010312,3.26e-26,9;UBERON:0004088,3.26e-26,9;UBERON:0002104,3.26e-26,9;UBERON:0001456,3.26e-26,9;UBERON:0003072,3.26e-26,9;UBERON:0004128,3.26e-26,9;UBERON:0003071,3.26e-26,9;UBERON:0001444,3.00e-21,11;UBERON:0000020,2.18e-19,12;UBERON:0001032,2.18e-19,12;UBERON:0004456,2.18e-19,12;UBERON:0003056,4.53e-19,49;UBERON:0000033,8.24e-18,13;UBERON:0005085,8.24e-18,13;UBERON:0002346,7.23e-14,64;UBERON:0003075,7.23e-14,64;UBERON:0007284,7.23e-14,64;UBERON:0003126,1.64e-12,3;UBERON:0001005,1.64e-12,3;UBERON:0007196,1.64e-12,3;UBERON:0001558,1.64e-12,3;UBERON:0010371,9.08e-12,73;UBERON:0004121,7.56e-11,95;UBERON:0000924,7.56e-11,95;UBERON:0006601,7.56e-11,95;UBERON:0010314,1.11e-08,92;UBERON:0000956,5.66e-08,21;UBERON:0001869,5.66e-08,21;UBERON:0000203,5.66e-08,21;UBERON:0007811,3.51e-07,36;UBERON:0003528,4.20e-07,29;UBERON:0002791,4.20e-07,29;UBERON:0001893,4.20e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.97717564461025,0.972149495371417,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,1.92109152660777,3.11068836925433,1.62007125998029,1.26194976810829,0,0,0.367472397644862,0.287536413054709,0,0,0.255374676170375,0,0.659431438650969,0.640413505216868,1.04182674111352,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,0,0,2.16491041011214,2.02687892380079,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,5.47148825304832,1.43132487258974,2.98872735763515,1.62055916824814,2.26057226753573,1.08858398642125,1.0249097622788,0.937017245597288,3.10444044886819,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,1.07168517515796,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.415149390336707,1.59609949360412,0.682934423016537,0.243106717068294,0,0.735374033800057,0,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.97717564461025,0.972149495371417,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,1.92109152660777,3.11068836925433,1.62007125998029,1.26194976810829,0,0,0.367472397644862,0.287536413054709,0,0,0.255374676170375,0,0.659431438650969,0.640413505216868,1.04182674111352,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,0,0,2.16491041011214,2.02687892380079,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,5.47148825304832,1.43132487258974,2.98872735763515,1.62055916824814,2.26057226753573,1.08858398642125,1.0249097622788,0.937017245597288,3.10444044886819,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,1.07168517515796,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.415149390336707,1.59609949360412,0.682934423016537,0.243106717068294,0,0.735374033800057,0,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p@chr11:21901846..21901849,+ | |short_description=p@chr11:21901846..21901849,+ | ||
}} | }} |
Revision as of 16:58, 14 November 2012
Short description: | p@chr11:21901846..21901849, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:21901846..21901849, + |
Coexpression cluster: | MCL_coexpression_mm9:1559 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.64e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.64e-12 | 3 |
branched duct epithelial cell | 1.64e-12 | 3 |
epithelial cell of lower respiratory tract | 1.64e-12 | 3 |
respiratory epithelial cell | 1.64e-12 | 3 |
tracheal epithelial cell | 1.64e-12 | 3 |
tracheoblast | 1.64e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 3.26e-26 | 9 |
camera-type eye | 3.26e-26 | 9 |
simple eye | 3.26e-26 | 9 |
immature eye | 3.26e-26 | 9 |
ocular region | 3.26e-26 | 9 |
visual system | 3.26e-26 | 9 |
face | 3.26e-26 | 9 |
optic cup | 3.26e-26 | 9 |
optic vesicle | 3.26e-26 | 9 |
eye primordium | 3.26e-26 | 9 |
subdivision of head | 3.00e-21 | 11 |
sense organ | 2.18e-19 | 12 |
sensory system | 2.18e-19 | 12 |
entire sense organ system | 2.18e-19 | 12 |
pre-chordal neural plate | 4.53e-19 | 49 |
head | 8.24e-18 | 13 |
ectodermal placode | 8.24e-18 | 13 |
neurectoderm | 7.23e-14 | 64 |
neural plate | 7.23e-14 | 64 |
presumptive neural plate | 7.23e-14 | 64 |
trachea | 1.64e-12 | 3 |
respiratory airway | 1.64e-12 | 3 |
tracheobronchial tree | 1.64e-12 | 3 |
lower respiratory tract | 1.64e-12 | 3 |
ecto-epithelium | 9.08e-12 | 73 |
ectoderm-derived structure | 7.56e-11 | 95 |
ectoderm | 7.56e-11 | 95 |
presumptive ectoderm | 7.56e-11 | 95 |
structure with developmental contribution from neural crest | 1.11e-08 | 92 |
cerebral cortex | 5.66e-08 | 21 |
cerebral hemisphere | 5.66e-08 | 21 |
pallium | 5.66e-08 | 21 |
craniocervical region | 3.51e-07 | 36 |
brain grey matter | 4.20e-07 | 29 |
regional part of telencephalon | 4.20e-07 | 29 |
telencephalon | 4.20e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.