FFCP PHASE1:Mm9::chr17:90745937..90745941,-: Difference between revisions
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|id=chr17:90745937..90745941,- | |id=chr17:90745937..90745941,- | ||
|ontology_enrichment_celltype=CL:0000540!1.44e-29!33;CL:0000047!1.44e-29!33;CL:0000031!1.44e-29!33;CL:0000404!1.44e-29!33;CL:0000117!4.92e-28!23;CL:0000337!4.92e-28!23;CL:0000393!2.58e-24!39;CL:0000211!2.58e-24!39;CL:0002319!1.26e-21!43;CL:0000221!4.97e-21!44;CL:0000133!4.97e-21!44;CL:0000055!5.88e-18!50;CL:0002321!1.58e-11!70;CL:0000220!1.58e-11!70;CL:0002609!9.12e-11!6;CL:0002612!7.45e-10!3;CL:0000723!7.68e-08!91;CL:0000048!7.68e-08!91;CL:0000034!4.37e-07!97 | |ontology_enrichment_celltype=CL:0000540!1.44e-29!33;CL:0000047!1.44e-29!33;CL:0000031!1.44e-29!33;CL:0000404!1.44e-29!33;CL:0000117!4.92e-28!23;CL:0000337!4.92e-28!23;CL:0000393!2.58e-24!39;CL:0000211!2.58e-24!39;CL:0002319!1.26e-21!43;CL:0000221!4.97e-21!44;CL:0000133!4.97e-21!44;CL:0000055!5.88e-18!50;CL:0002321!1.58e-11!70;CL:0000220!1.58e-11!70;CL:0002609!9.12e-11!6;CL:0002612!7.45e-10!3;CL:0000723!7.68e-08!91;CL:0000048!7.68e-08!91;CL:0000034!4.37e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002612,1.01e-20,3;CL:0002610,3.11e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.41e-28!73;UBERON:0005743!4.41e-28!73;UBERON:0000073!3.58e-27!75;UBERON:0001016!3.58e-27!75;UBERON:0001049!1.38e-20!52;UBERON:0005068!1.38e-20!52;UBERON:0006241!1.38e-20!52;UBERON:0007135!1.38e-20!52;UBERON:0002020!7.39e-20!34;UBERON:0004121!7.97e-20!102;UBERON:0000924!7.97e-20!102;UBERON:0006601!7.97e-20!102;UBERON:0002616!9.12e-20!49;UBERON:0000955!2.82e-19!50;UBERON:0006238!2.82e-19!50;UBERON:0002346!1.63e-18!71;UBERON:0003075!1.63e-18!71;UBERON:0007284!1.63e-18!71;UBERON:0000033!7.50e-16!63;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0002780!3.99e-14!39;UBERON:0001890!3.99e-14!39;UBERON:0006240!3.99e-14!39;UBERON:0003080!1.10e-13!40;UBERON:0003056!5.82e-12!49;UBERON:0000956!7.91e-11!21;UBERON:0001869!7.91e-11!21;UBERON:0000203!7.91e-11!21;UBERON:0007811!2.57e-10!86;UBERON:0002257!7.45e-10!3;UBERON:0000153!4.97e-09!94;UBERON:0003076!6.70e-08!12;UBERON:0003057!6.70e-08!12;UBERON:0004111!9.00e-07!122;UBERON:0000025!9.31e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!4.41e-28!73;UBERON:0005743!4.41e-28!73;UBERON:0000073!3.58e-27!75;UBERON:0001016!3.58e-27!75;UBERON:0001049!1.38e-20!52;UBERON:0005068!1.38e-20!52;UBERON:0006241!1.38e-20!52;UBERON:0007135!1.38e-20!52;UBERON:0002020!7.39e-20!34;UBERON:0004121!7.97e-20!102;UBERON:0000924!7.97e-20!102;UBERON:0006601!7.97e-20!102;UBERON:0002616!9.12e-20!49;UBERON:0000955!2.82e-19!50;UBERON:0006238!2.82e-19!50;UBERON:0002346!1.63e-18!71;UBERON:0003075!1.63e-18!71;UBERON:0007284!1.63e-18!71;UBERON:0000033!7.50e-16!63;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0002780!3.99e-14!39;UBERON:0001890!3.99e-14!39;UBERON:0006240!3.99e-14!39;UBERON:0003080!1.10e-13!40;UBERON:0003056!5.82e-12!49;UBERON:0000956!7.91e-11!21;UBERON:0001869!7.91e-11!21;UBERON:0000203!7.91e-11!21;UBERON:0007811!2.57e-10!86;UBERON:0002257!7.45e-10!3;UBERON:0000153!4.97e-09!94;UBERON:0003076!6.70e-08!12;UBERON:0003057!6.70e-08!12;UBERON:0004111!9.00e-07!122;UBERON:0000025!9.31e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.01e-20,3;UBERON:0004684,3.11e-20,3;UBERON:0002275,3.11e-20,3;UBERON:0001948,7.22e-13,5;UBERON:0002315,7.22e-13,5;UBERON:0002240,6.82e-11,6;UBERON:0005174,6.82e-11,6;UBERON:0001137,6.82e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.67e-07,54 | |||
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|short_description=p@chr17:90745937..90745941,- | |short_description=p@chr17:90745937..90745941,- | ||
}} | }} |
Revision as of 17:02, 14 November 2012
Short description: | p@chr17:90745937..90745941, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:90745937..90745941, - |
Coexpression cluster: | MCL_coexpression_mm9:2228 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
neuron of the ventral spinal cord | 1.01e-20 | 3 |
raphe nuclei neuron | 3.11e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.01e-20 | 3 |
raphe nuclei | 3.11e-20 | 3 |
reticular formation | 3.11e-20 | 3 |
regional part of spinal cord | 7.22e-13 | 5 |
gray matter of spinal cord | 7.22e-13 | 5 |
spinal cord | 6.82e-11 | 6 |
dorsal region element | 6.82e-11 | 6 |
dorsum | 6.82e-11 | 6 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.67e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.