FFCP PHASE1:Mm9::chr8:67087900..67087910,-: Difference between revisions
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|id=chr8:67087900..67087910,- | |id=chr8:67087900..67087910,- | ||
|ontology_enrichment_celltype=CL:0000117!1.29e-15!23;CL:0000337!1.29e-15!23;CL:0000055!1.65e-15!50;CL:0002319!4.79e-15!43;CL:0000221!1.55e-14!44;CL:0000133!1.55e-14!44;CL:0000393!9.63e-13!39;CL:0000211!9.63e-13!39;CL:0000540!7.04e-12!33;CL:0000047!7.04e-12!33;CL:0000031!7.04e-12!33;CL:0000404!7.04e-12!33;CL:0002321!1.24e-10!70;CL:0000220!1.24e-10!70 | |ontology_enrichment_celltype=CL:0000117!1.29e-15!23;CL:0000337!1.29e-15!23;CL:0000055!1.65e-15!50;CL:0002319!4.79e-15!43;CL:0000221!1.55e-14!44;CL:0000133!1.55e-14!44;CL:0000393!9.63e-13!39;CL:0000211!9.63e-13!39;CL:0000540!7.04e-12!33;CL:0000047!7.04e-12!33;CL:0000031!7.04e-12!33;CL:0000404!7.04e-12!33;CL:0002321!1.24e-10!70;CL:0000220!1.24e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-44,3;CL:0002612,3.11e-20,3;CL:0000117,2.72e-16,23;CL:0000337,2.72e-16,23;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0000393,8.49e-10,39;CL:0000211,8.49e-10,39;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.16e-20!75;UBERON:0001016!2.16e-20!75;UBERON:0001017!4.08e-20!73;UBERON:0005743!4.08e-20!73;UBERON:0002020!4.68e-18!34;UBERON:0001049!1.27e-16!52;UBERON:0005068!1.27e-16!52;UBERON:0006241!1.27e-16!52;UBERON:0007135!1.27e-16!52;UBERON:0004121!1.31e-16!102;UBERON:0000924!1.31e-16!102;UBERON:0006601!1.31e-16!102;UBERON:0002616!5.62e-14!49;UBERON:0002346!9.75e-14!71;UBERON:0003075!9.75e-14!71;UBERON:0007284!9.75e-14!71;UBERON:0000955!1.52e-13!50;UBERON:0006238!1.52e-13!50;UBERON:0002791!3.16e-12!29;UBERON:0003528!3.16e-12!29;UBERON:0001893!3.16e-12!29;UBERON:0000033!6.39e-12!63;UBERON:0002780!2.12e-11!39;UBERON:0001890!2.12e-11!39;UBERON:0006240!2.12e-11!39;UBERON:0003080!5.77e-11!40;UBERON:0003056!1.10e-09!49;UBERON:0002240!2.97e-09!6;UBERON:0005174!2.97e-09!6;UBERON:0001137!2.97e-09!6;UBERON:0000956!4.86e-09!21;UBERON:0001869!4.86e-09!21;UBERON:0000203!4.86e-09!21;UBERON:0001948!2.02e-08!5;UBERON:0002315!2.02e-08!5;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10;UBERON:0002619!4.24e-07!17;UBERON:0003076!7.89e-07!12;UBERON:0003057!7.89e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!2.16e-20!75;UBERON:0001016!2.16e-20!75;UBERON:0001017!4.08e-20!73;UBERON:0005743!4.08e-20!73;UBERON:0002020!4.68e-18!34;UBERON:0001049!1.27e-16!52;UBERON:0005068!1.27e-16!52;UBERON:0006241!1.27e-16!52;UBERON:0007135!1.27e-16!52;UBERON:0004121!1.31e-16!102;UBERON:0000924!1.31e-16!102;UBERON:0006601!1.31e-16!102;UBERON:0002616!5.62e-14!49;UBERON:0002346!9.75e-14!71;UBERON:0003075!9.75e-14!71;UBERON:0007284!9.75e-14!71;UBERON:0000955!1.52e-13!50;UBERON:0006238!1.52e-13!50;UBERON:0002791!3.16e-12!29;UBERON:0003528!3.16e-12!29;UBERON:0001893!3.16e-12!29;UBERON:0000033!6.39e-12!63;UBERON:0002780!2.12e-11!39;UBERON:0001890!2.12e-11!39;UBERON:0006240!2.12e-11!39;UBERON:0003080!5.77e-11!40;UBERON:0003056!1.10e-09!49;UBERON:0002240!2.97e-09!6;UBERON:0005174!2.97e-09!6;UBERON:0001137!2.97e-09!6;UBERON:0000956!4.86e-09!21;UBERON:0001869!4.86e-09!21;UBERON:0000203!4.86e-09!21;UBERON:0001948!2.02e-08!5;UBERON:0002315!2.02e-08!5;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10;UBERON:0002619!4.24e-07!17;UBERON:0003076!7.89e-07!12;UBERON:0003057!7.89e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.33e-44,3;UBERON:0002275,2.33e-44,3;UBERON:0002257,3.11e-20,3;UBERON:0001948,1.41e-12,5;UBERON:0002315,1.41e-12,5;UBERON:0002240,1.19e-10,6;UBERON:0005174,1.19e-10,6;UBERON:0001137,1.19e-10,6;UBERON:0000073,4.19e-10,54;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,3.30347642998166,2.55374676170375,2.61131106535614,0,0.640413505216868,0,0.279182999001381,0.56276261003168,0.916789486660861,1.47314292736834,2.98980529678116,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.71868654031819,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,3.30347642998166,2.55374676170375,2.61131106535614,0,0.640413505216868,0,0.279182999001381,0.56276261003168,0.916789486660861,1.47314292736834,2.98980529678116,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.71868654031819,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr8:67087900..67087910,- | |short_description=p@chr8:67087900..67087910,- | ||
}} | }} |
Revision as of 21:39, 14 November 2012
Short description: | p@chr8:67087900..67087910, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:67087900..67087910, - |
Coexpression cluster: | MCL_coexpression_mm9:666 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.33e-44 | 3 |
neuron of the ventral spinal cord | 3.11e-20 | 3 |
CNS neuron (sensu Vertebrata) | 2.72e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-16 | 23 |
neuron | 1.68e-11 | 33 |
neuronal stem cell | 1.68e-11 | 33 |
neuroblast | 1.68e-11 | 33 |
electrically signaling cell | 1.68e-11 | 33 |
electrically responsive cell | 8.49e-10 | 39 |
electrically active cell | 8.49e-10 | 39 |
neural cell | 6.37e-09 | 43 |
ectodermal cell | 9.96e-09 | 44 |
neurectodermal cell | 9.96e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.33e-44 | 3 |
reticular formation | 2.33e-44 | 3 |
ventral horn of spinal cord | 3.11e-20 | 3 |
regional part of spinal cord | 1.41e-12 | 5 |
gray matter of spinal cord | 1.41e-12 | 5 |
spinal cord | 1.19e-10 | 6 |
dorsal region element | 1.19e-10 | 6 |
dorsum | 1.19e-10 | 6 |
regional part of nervous system | 4.19e-10 | 54 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.