FFCP PHASE1:Mm9::chr1:72895819..72895843,+: Difference between revisions
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|id=chr1:72895819..72895843,+ | |id=chr1:72895819..72895843,+ | ||
|ontology_enrichment_celltype=CL:0002453!9.24e-10!8;CL:0000128!8.57e-08!6;CL:0000126!8.57e-08!6;CL:0000127!8.57e-08!6;CL:0000333!2.97e-07!10;CL:0000095!2.97e-07!10;CL:0000243!2.97e-07!10;CL:0000123!2.97e-07!10;CL:0000125!2.97e-07!10;CL:0000030!2.97e-07!10;CL:0000339!2.97e-07!10 | |ontology_enrichment_celltype=CL:0002453!9.24e-10!8;CL:0000128!8.57e-08!6;CL:0000126!8.57e-08!6;CL:0000127!8.57e-08!6;CL:0000333!2.97e-07!10;CL:0000095!2.97e-07!10;CL:0000243!2.97e-07!10;CL:0000123!2.97e-07!10;CL:0000125!2.97e-07!10;CL:0000030!2.97e-07!10;CL:0000339!2.97e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.72e-33,8;CL:0000333,1.98e-26,10;CL:0000095,1.98e-26,10;CL:0000243,1.98e-26,10;CL:0000123,1.98e-26,10;CL:0000125,1.98e-26,10;CL:0000030,1.98e-26,10;CL:0000339,1.98e-26,10;CL:0000128,1.15e-25,6;CL:0000126,1.15e-25,6;CL:0000127,1.15e-25,6;CL:0000182,1.76e-12,5;CL:0000219,1.95e-12,54;CL:0002605,5.74e-10,2;CL:0002604,5.74e-10,2;CL:0002603,1.25e-09,2;CL:0000878,3.24e-09,2;CL:0000129,3.24e-09,2;CL:0002321,5.34e-09,70;CL:0002319,3.81e-08,43;CL:0000221,6.35e-08,44;CL:0000133,6.35e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.14e-09!114;UBERON:0004111!6.12e-09!122;UBERON:0002107!6.66e-08!22;UBERON:0007499!6.66e-08!22;UBERON:0006925!6.66e-08!22;UBERON:0009497!6.66e-08!22;UBERON:0000015!6.66e-08!22;UBERON:0002423!6.66e-08!22;UBERON:0006235!6.66e-08!22;UBERON:0008835!6.66e-08!22;UBERON:0003894!6.66e-08!22;UBERON:0004161!6.66e-08!22;UBERON:0008836!6.66e-08!22;UBERON:0002346!9.78e-08!71;UBERON:0003075!9.78e-08!71;UBERON:0007284!9.78e-08!71;UBERON:0001017!1.07e-07!73;UBERON:0005743!1.07e-07!73;UBERON:0009854!2.42e-07!23;UBERON:0009856!2.42e-07!23;UBERON:0000073!3.28e-07!75;UBERON:0001016!3.28e-07!75;UBERON:0004121!5.27e-07!102;UBERON:0000924!5.27e-07!102;UBERON:0006601!5.27e-07!102;UBERON:0001049!5.90e-07!52;UBERON:0005068!5.90e-07!52;UBERON:0006241!5.90e-07!52;UBERON:0007135!5.90e-07!52 | |ontology_enrichment_uberon=UBERON:0000025!3.14e-09!114;UBERON:0004111!6.12e-09!122;UBERON:0002107!6.66e-08!22;UBERON:0007499!6.66e-08!22;UBERON:0006925!6.66e-08!22;UBERON:0009497!6.66e-08!22;UBERON:0000015!6.66e-08!22;UBERON:0002423!6.66e-08!22;UBERON:0006235!6.66e-08!22;UBERON:0008835!6.66e-08!22;UBERON:0003894!6.66e-08!22;UBERON:0004161!6.66e-08!22;UBERON:0008836!6.66e-08!22;UBERON:0002346!9.78e-08!71;UBERON:0003075!9.78e-08!71;UBERON:0007284!9.78e-08!71;UBERON:0001017!1.07e-07!73;UBERON:0005743!1.07e-07!73;UBERON:0009854!2.42e-07!23;UBERON:0009856!2.42e-07!23;UBERON:0000073!3.28e-07!75;UBERON:0001016!3.28e-07!75;UBERON:0004121!5.27e-07!102;UBERON:0000924!5.27e-07!102;UBERON:0006601!5.27e-07!102;UBERON:0001049!5.90e-07!52;UBERON:0005068!5.90e-07!52;UBERON:0006241!5.90e-07!52;UBERON:0007135!5.90e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.15e-20,22;UBERON:0007499,2.15e-20,22;UBERON:0006925,2.15e-20,22;UBERON:0009497,2.15e-20,22;UBERON:0000015,2.15e-20,22;UBERON:0002423,2.15e-20,22;UBERON:0006235,2.15e-20,22;UBERON:0008835,2.15e-20,22;UBERON:0003894,2.15e-20,22;UBERON:0004161,2.15e-20,22;UBERON:0008836,2.15e-20,22;UBERON:0009854,1.98e-19,23;UBERON:0009856,1.98e-19,23;UBERON:0002365,9.85e-18,25;UBERON:0002330,9.85e-18,25;UBERON:0005256,4.77e-09,45;UBERON:0003914,1.38e-08,47;UBERON:0005172,3.67e-08,49;UBERON:0005173,3.67e-08,49;UBERON:0002417,3.67e-08,49;UBERON:0000916,3.67e-08,49;UBERON:0003929,4.50e-07,55 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,12.6454590700659,24.3851662835264,37.3305406222624,3.07970127575798,12.9377307928474,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,2.99600110518405,6.91592949578798,0.311068836925433,0.540023753326763,0,1.42825492201902,0.883474163806454,0,0.0958454710182364,0,0,0.255374676170375,0,0.395658863190582,0,0,0.279182999001381,0,0,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,3.44169550792555,2.03991400112325,1.07940638327563,1.94932925234301,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0.611036183101898,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.360124259610698,0,0.136072998302656,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,6.64754429777645,2.47105271869273,15.814502718009,4.83783231969054,3.74445207737473,0.252578877947112,0.179397413521912,3.85954817090694,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,0.750729901804728,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,12.6454590700659,24.3851662835264,37.3305406222624,3.07970127575798,12.9377307928474,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,2.99600110518405,6.91592949578798,0.311068836925433,0.540023753326763,0,1.42825492201902,0.883474163806454,0,0.0958454710182364,0,0,0.255374676170375,0,0.395658863190582,0,0,0.279182999001381,0,0,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,3.44169550792555,2.03991400112325,1.07940638327563,1.94932925234301,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0.611036183101898,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.360124259610698,0,0.136072998302656,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,6.64754429777645,2.47105271869273,15.814502718009,4.83783231969054,3.74445207737473,0.252578877947112,0.179397413521912,3.85954817090694,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,0.750729901804728,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:72895819..72895843,+ | |short_description=p@chr1:72895819..72895843,+ | ||
}} | }} |
Revision as of 04:56, 15 November 2012
Short description: | p@chr1:72895819..72895843, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895819..72895843, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.72e-33 | 8 |
migratory neural crest cell | 1.98e-26 | 10 |
neuron associated cell | 1.98e-26 | 10 |
glial cell (sensu Vertebrata) | 1.98e-26 | 10 |
neuron associated cell (sensu Vertebrata) | 1.98e-26 | 10 |
glial cell | 1.98e-26 | 10 |
glioblast | 1.98e-26 | 10 |
glioblast (sensu Vertebrata) | 1.98e-26 | 10 |
oligodendrocyte | 1.15e-25 | 6 |
macroglial cell | 1.15e-25 | 6 |
astrocyte | 1.15e-25 | 6 |
hepatocyte | 1.76e-12 | 5 |
motile cell | 1.95e-12 | 54 |
astrocyte of the cerebral cortex | 5.74e-10 | 2 |
astrocyte of the hippocampus | 5.74e-10 | 2 |
astrocyte of the cerebellum | 1.25e-09 | 2 |
central nervous system macrophage | 3.24e-09 | 2 |
microglial cell | 3.24e-09 | 2 |
embryonic cell | 5.34e-09 | 70 |
neural cell | 3.81e-08 | 43 |
ectodermal cell | 6.35e-08 | 44 |
neurectodermal cell | 6.35e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
liver | 2.15e-20 | 22 |
epithelial sac | 2.15e-20 | 22 |
digestive gland | 2.15e-20 | 22 |
epithelium of foregut-midgut junction | 2.15e-20 | 22 |
anatomical boundary | 2.15e-20 | 22 |
hepatobiliary system | 2.15e-20 | 22 |
foregut-midgut junction | 2.15e-20 | 22 |
hepatic diverticulum | 2.15e-20 | 22 |
liver primordium | 2.15e-20 | 22 |
septum transversum | 2.15e-20 | 22 |
liver bud | 2.15e-20 | 22 |
digestive tract diverticulum | 1.98e-19 | 23 |
sac | 1.98e-19 | 23 |
exocrine gland | 9.85e-18 | 25 |
exocrine system | 9.85e-18 | 25 |
trunk mesenchyme | 4.77e-09 | 45 |
epithelial tube | 1.38e-08 | 47 |
abdomen element | 3.67e-08 | 49 |
abdominal segment element | 3.67e-08 | 49 |
abdominal segment of trunk | 3.67e-08 | 49 |
abdomen | 3.67e-08 | 49 |
gut epithelium | 4.50e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.