FFCP PHASE1:Mm9::chr7:4103466..4103478,-: Difference between revisions
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|id=chr7:4103466..4103478,- | |id=chr7:4103466..4103478,- | ||
|ontology_enrichment_celltype=CL:0002563!1.38e-17!9;CL:0002251!1.38e-17!9;CL:0000239!4.05e-12!6;CL:0000677!4.05e-12!6;CL:0000212!4.05e-12!6;CL:0000584!4.05e-12!6;CL:0000075!2.97e-10!7;CL:0002076!9.95e-10!15;CL:0000066!4.13e-09!25;CL:0002250!4.85e-07!3;CL:0000223!8.29e-07!20 | |ontology_enrichment_celltype=CL:0002563!1.38e-17!9;CL:0002251!1.38e-17!9;CL:0000239!4.05e-12!6;CL:0000677!4.05e-12!6;CL:0000212!4.05e-12!6;CL:0000584!4.05e-12!6;CL:0000075!2.97e-10!7;CL:0002076!9.95e-10!15;CL:0000066!4.13e-09!25;CL:0002250!4.85e-07!3;CL:0000223!8.29e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-29,9;CL:0002251,3.14e-29,9;CL:0000239,9.08e-20,6;CL:0000677,9.08e-20,6;CL:0000584,9.08e-20,6;CL:0002076,5.94e-17,15;CL:0000075,7.20e-17,7;CL:0000066,3.68e-14,25;CL:0000223,2.42e-12,20;CL:0002250,5.09e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.50e-30!43;UBERON:0000344!1.74e-28!15;UBERON:0001242!2.92e-25!13;UBERON:0000060!2.92e-25!13;UBERON:0001262!2.92e-25!13;UBERON:0004786!2.92e-25!13;UBERON:0005409!1.64e-23!59;UBERON:0004923!2.33e-18!24;UBERON:0003350!1.38e-17!9;UBERON:0004808!1.38e-17!9;UBERON:0001277!1.38e-17!9;UBERON:0000485!5.21e-14!11;UBERON:0001007!3.81e-08!128;UBERON:0001555!3.81e-08!128;UBERON:0007026!3.81e-08!128;UBERON:0004119!6.72e-08!130;UBERON:0000925!6.72e-08!130;UBERON:0006595!6.72e-08!130;UBERON:0000331!2.13e-07!3;UBERON:0002116!2.13e-07!3;UBERON:0001204!2.13e-07!3;UBERON:0001168!2.13e-07!3;UBERON:0004921!6.79e-07!126;UBERON:0004185!6.79e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!2.50e-30!43;UBERON:0000344!1.74e-28!15;UBERON:0001242!2.92e-25!13;UBERON:0000060!2.92e-25!13;UBERON:0001262!2.92e-25!13;UBERON:0004786!2.92e-25!13;UBERON:0005409!1.64e-23!59;UBERON:0004923!2.33e-18!24;UBERON:0003350!1.38e-17!9;UBERON:0004808!1.38e-17!9;UBERON:0001277!1.38e-17!9;UBERON:0000485!5.21e-14!11;UBERON:0001007!3.81e-08!128;UBERON:0001555!3.81e-08!128;UBERON:0007026!3.81e-08!128;UBERON:0004119!6.72e-08!130;UBERON:0000925!6.72e-08!130;UBERON:0006595!6.72e-08!130;UBERON:0000331!2.13e-07!3;UBERON:0002116!2.13e-07!3;UBERON:0001204!2.13e-07!3;UBERON:0001168!2.13e-07!3;UBERON:0004921!6.79e-07!126;UBERON:0004185!6.79e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.91e-49,31;UBERON:0001242,1.55e-42,13;UBERON:0001262,1.55e-42,13;UBERON:0004786,1.55e-42,13;UBERON:0000344,2.98e-42,15;UBERON:0005409,2.24e-34,47;UBERON:0003350,3.14e-29,9;UBERON:0004808,3.14e-29,9;UBERON:0001277,3.14e-29,9;UBERON:0004923,2.24e-25,24;UBERON:0000485,1.18e-23,11;UBERON:0002108,7.05e-15,4;UBERON:0001007,1.21e-12,116;UBERON:0001555,1.21e-12,116;UBERON:0007026,1.21e-12,116;UBERON:0004119,2.35e-12,118;UBERON:0000925,2.35e-12,118;UBERON:0006595,2.35e-12,118;UBERON:0004921,1.19e-11,114;UBERON:0000331,1.24e-11,3;UBERON:0002116,1.24e-11,3;UBERON:0001204,1.24e-11,3;UBERON:0001168,1.24e-11,3 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,4.53696316960245,6.51164448930251,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,2.06468352960453,1.14846392823004,0.86152399231815,1.939241094173,5.89072600314759,5.29263272495855,3.32595765982957,0,0,0,4.62162591602039,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0.403367049246685,0.22237804384487,0.380451252225118,2.84717436926707,1.64698954724011,1.75934646160189,0.397912944082302,2.33956904542944,3.59527763461689,3.02593269824572,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,2.20345454596048,0,0,0,0,0,0,0,0,0.2604087696879,0.838874755405687,1.44950472495604,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,2.09385244583617,2.27499619694768,4.53696316960245,6.51164448930251,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,2.06468352960453,1.14846392823004,0.86152399231815,1.939241094173,5.89072600314759,5.29263272495855,3.32595765982957,0,0,0,4.62162591602039,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0.403367049246685,0.22237804384487,0.380451252225118,2.84717436926707,1.64698954724011,1.75934646160189,0.397912944082302,2.33956904542944,3.59527763461689,3.02593269824572,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,2.20345454596048,0,0,0,0,0,0,0,0,0.2604087696879,0.838874755405687,1.44950472495604,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr7:4103466..4103478,- | |short_description=p@chr7:4103466..4103478,- | ||
}} | }} |
Revision as of 05:42, 15 November 2012
Short description: | p@chr7:4103466..4103478, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:4103466..4103478, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.14e-29 | 9 |
epithelial cell of alimentary canal | 3.14e-29 | 9 |
brush border epithelial cell | 9.08e-20 | 6 |
gut absorptive cell | 9.08e-20 | 6 |
enterocyte | 9.08e-20 | 6 |
endo-epithelial cell | 5.94e-17 | 15 |
columnar/cuboidal epithelial cell | 7.20e-17 | 7 |
epithelial cell | 3.68e-14 | 25 |
endodermal cell | 2.42e-12 | 20 |
intestinal crypt stem cell | 5.09e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.91e-49 | 31 |
intestinal mucosa | 1.55e-42 | 13 |
wall of intestine | 1.55e-42 | 13 |
gastrointestinal system mucosa | 1.55e-42 | 13 |
mucosa | 2.98e-42 | 15 |
gastrointestinal system | 2.24e-34 | 47 |
epithelium of mucosa | 3.14e-29 | 9 |
gastrointestinal system epithelium | 3.14e-29 | 9 |
intestinal epithelium | 3.14e-29 | 9 |
organ component layer | 2.24e-25 | 24 |
simple columnar epithelium | 1.18e-23 | 11 |
small intestine | 7.05e-15 | 4 |
digestive system | 1.21e-12 | 116 |
digestive tract | 1.21e-12 | 116 |
primitive gut | 1.21e-12 | 116 |
endoderm-derived structure | 2.35e-12 | 118 |
endoderm | 2.35e-12 | 118 |
presumptive endoderm | 2.35e-12 | 118 |
subdivision of digestive tract | 1.19e-11 | 114 |
ileal mucosa | 1.24e-11 | 3 |
ileum | 1.24e-11 | 3 |
mucosa of small intestine | 1.24e-11 | 3 |
wall of small intestine | 1.24e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.