FFCP PHASE1:Mm9::chr5:148047120..148047133,-: Difference between revisions
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|id=chr5:148047120..148047133,- | |id=chr5:148047120..148047133,- | ||
|ontology_enrichment_celltype=CL:0002563!6.90e-16!9;CL:0002251!6.90e-16!9;CL:0000239!9.67e-12!6;CL:0000677!9.67e-12!6;CL:0000212!9.67e-12!6;CL:0000584!9.67e-12!6;CL:0000075!6.19e-10!7;CL:0002076!8.90e-09!15;CL:0000066!1.10e-08!25;CL:0000473!6.64e-07!3;CL:0000627!6.64e-07!3;CL:0000682!6.64e-07!3 | |ontology_enrichment_celltype=CL:0002563!6.90e-16!9;CL:0002251!6.90e-16!9;CL:0000239!9.67e-12!6;CL:0000677!9.67e-12!6;CL:0000212!9.67e-12!6;CL:0000584!9.67e-12!6;CL:0000075!6.19e-10!7;CL:0002076!8.90e-09!15;CL:0000066!1.10e-08!25;CL:0000473!6.64e-07!3;CL:0000627!6.64e-07!3;CL:0000682!6.64e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.82e-12,6;CL:0000677,1.82e-12,6;CL:0000584,1.82e-12,6;CL:0002563,2.81e-11,9;CL:0002251,2.81e-11,9;CL:0000075,1.22e-10,7;CL:0000682,1.06e-09,3;CL:0000066,4.02e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.73e-28!59;UBERON:0000160!1.53e-27!43;UBERON:0000344!2.78e-26!15;UBERON:0001242!8.59e-23!13;UBERON:0000060!8.59e-23!13;UBERON:0001262!8.59e-23!13;UBERON:0004786!8.59e-23!13;UBERON:0003350!6.90e-16!9;UBERON:0004808!6.90e-16!9;UBERON:0001277!6.90e-16!9;UBERON:0004923!6.26e-15!24;UBERON:0000485!1.19e-12!11;UBERON:0001007!2.37e-10!128;UBERON:0001555!2.37e-10!128;UBERON:0007026!2.37e-10!128;UBERON:0004119!4.65e-10!130;UBERON:0000925!4.65e-10!130;UBERON:0006595!4.65e-10!130;UBERON:0004921!7.44e-09!126;UBERON:0004185!7.44e-09!126 | |ontology_enrichment_uberon=UBERON:0005409!1.73e-28!59;UBERON:0000160!1.53e-27!43;UBERON:0000344!2.78e-26!15;UBERON:0001242!8.59e-23!13;UBERON:0000060!8.59e-23!13;UBERON:0001262!8.59e-23!13;UBERON:0004786!8.59e-23!13;UBERON:0003350!6.90e-16!9;UBERON:0004808!6.90e-16!9;UBERON:0001277!6.90e-16!9;UBERON:0004923!6.26e-15!24;UBERON:0000485!1.19e-12!11;UBERON:0001007!2.37e-10!128;UBERON:0001555!2.37e-10!128;UBERON:0007026!2.37e-10!128;UBERON:0004119!4.65e-10!130;UBERON:0000925!4.65e-10!130;UBERON:0006595!4.65e-10!130;UBERON:0004921!7.44e-09!126;UBERON:0004185!7.44e-09!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-38,31;UBERON:0005409,5.88e-29,47;UBERON:0000344,7.49e-26,15;UBERON:0001242,7.65e-21,13;UBERON:0001262,7.65e-21,13;UBERON:0004786,7.65e-21,13;UBERON:0004923,2.99e-15,24;UBERON:0002108,7.23e-12,4;UBERON:0003350,2.81e-11,9;UBERON:0004808,2.81e-11,9;UBERON:0001277,2.81e-11,9;UBERON:0001007,4.60e-11,116;UBERON:0001555,4.60e-11,116;UBERON:0007026,4.60e-11,116;UBERON:0004119,8.66e-11,118;UBERON:0000925,8.66e-11,118;UBERON:0006595,8.66e-11,118;UBERON:0000485,4.11e-09,11;UBERON:0004921,4.17e-09,114;UBERON:0000331,6.30e-09,3;UBERON:0002116,6.30e-09,3;UBERON:0001204,6.30e-09,3;UBERON:0001168,6.30e-09,3;UBERON:0001962,9.07e-07,2;UBERON:0001961,9.07e-07,2;UBERON:0001744,9.07e-07,2 | |||
|phase1_expression=0,12.9120900826564,8.64498554840118,8.16653370528441,9.01612313903425,0.503637815735669,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.5881856213434,9.76194338995534,6.8921919385452,4.52489588640367,1.90023419456374,2.52030129759931,3.10422714917427,0,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0283098156382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.4735409802204,16.6603856998033,0,0,0,0,0.444756087689741,0.570676878337677,19.455691523325,2.14108641141214,4.02136334080431,1.79060824837036,5.06906626509712,12.5834717211591,4.53889904736858,10.1562049359727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0.836353184057875,1.31017538247707,0.269728692769641,0.578574190077352,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,12.9120900826564,8.64498554840118,8.16653370528441,9.01612313903425,0.503637815735669,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.5881856213434,9.76194338995534,6.8921919385452,4.52489588640367,1.90023419456374,2.52030129759931,3.10422714917427,0,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0283098156382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.4735409802204,16.6603856998033,0,0,0,0,0.444756087689741,0.570676878337677,19.455691523325,2.14108641141214,4.02136334080431,1.79060824837036,5.06906626509712,12.5834717211591,4.53889904736858,10.1562049359727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0.836353184057875,1.31017538247707,0.269728692769641,0.578574190077352,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr5:148047120..148047133,- | |short_description=p@chr5:148047120..148047133,- | ||
}} | }} |
Revision as of 06:58, 15 November 2012
Short description: | p@chr5:148047120..148047133, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:148047120..148047133, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.82e-12 | 6 |
gut absorptive cell | 1.82e-12 | 6 |
enterocyte | 1.82e-12 | 6 |
intestinal epithelial cell | 2.81e-11 | 9 |
epithelial cell of alimentary canal | 2.81e-11 | 9 |
columnar/cuboidal epithelial cell | 1.22e-10 | 7 |
M cell of gut | 1.06e-09 | 3 |
epithelial cell | 4.02e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-38 | 31 |
gastrointestinal system | 5.88e-29 | 47 |
mucosa | 7.49e-26 | 15 |
intestinal mucosa | 7.65e-21 | 13 |
wall of intestine | 7.65e-21 | 13 |
gastrointestinal system mucosa | 7.65e-21 | 13 |
organ component layer | 2.99e-15 | 24 |
small intestine | 7.23e-12 | 4 |
epithelium of mucosa | 2.81e-11 | 9 |
gastrointestinal system epithelium | 2.81e-11 | 9 |
intestinal epithelium | 2.81e-11 | 9 |
digestive system | 4.60e-11 | 116 |
digestive tract | 4.60e-11 | 116 |
primitive gut | 4.60e-11 | 116 |
endoderm-derived structure | 8.66e-11 | 118 |
endoderm | 8.66e-11 | 118 |
presumptive endoderm | 8.66e-11 | 118 |
simple columnar epithelium | 4.11e-09 | 11 |
subdivision of digestive tract | 4.17e-09 | 114 |
ileal mucosa | 6.30e-09 | 3 |
ileum | 6.30e-09 | 3 |
mucosa of small intestine | 6.30e-09 | 3 |
wall of small intestine | 6.30e-09 | 3 |
gut-associated lymphoid tissue | 9.07e-07 | 2 |
mucosa-associated lymphoid tissue | 9.07e-07 | 2 |
lymphoid tissue | 9.07e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.