FFCP PHASE1:Hg19::chr3:151034414..151034434,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000066!3.56e-18!254;CL:0002076!5.77e-17!43;CL:0000223!2.77e-13!59;CL:0000076!7.30e-13!62;CL:0002251!6.19e-10!21;CL:0002368!8.57e-09!13 | |ontology_enrichment_celltype=CL:0000066!3.56e-18!254;CL:0002076!5.77e-17!43;CL:0000223!2.77e-13!59;CL:0000076!7.30e-13!62;CL:0002251!6.19e-10!21;CL:0002368!8.57e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0002251;1.89e-09;20!CL:1001319;7.75e-09;1!CL:1000600;7.75e-09;1!CL:0002076;2.12e-08;42 | |ontology_enrichment_celltype_v019=CL:0002251;1.89e-09;20!CL:1001319;7.75e-09;1!CL:1000600;7.75e-09;1!CL:0002076;2.12e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.67e-12,63;CL:0002076,2.42e-10,42;CL:0002251,1.83e-09,20;CL:0000223,3.84e-09,58;CL:1001319,7.75e-09,1;CL:1000600,7.75e-09,1;CL:0000066,4.42e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.49e-16;2!UBERON:0010056;8.49e-16;2!UBERON:0000358;6.16e-09;1 | |ontology_enrichment_development_v019=UBERON:0008814;8.49e-16;2!UBERON:0010056;8.49e-16;2!UBERON:0000358;6.16e-09;1 | ||
|ontology_enrichment_disease=DOID:1749!2.84e-29!14;DOID:305!1.42e-13!106;DOID:0050687!2.23e-08!143 | |ontology_enrichment_disease=DOID:1749!2.84e-29!14;DOID:305!1.42e-13!106;DOID:0050687!2.23e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.85e-63;14!DOID:3151;4.35e-09;1!DOID:3149;4.35e-09;1!DOID:178;1.05e-08;1!DOID:326;1.05e-08;1!DOID:3978;1.05e-08;1!DOID:3394;1.05e-08;1!DOID:5844;1.05e-08;1!DOID:4362;6.85e-07;5 | |ontology_enrichment_disease_v019=DOID:1749;7.85e-63;14!DOID:3151;4.35e-09;1!DOID:3149;4.35e-09;1!DOID:178;1.05e-08;1!DOID:326;1.05e-08;1!DOID:3978;1.05e-08;1!DOID:3394;1.05e-08;1!DOID:5844;1.05e-08;1!DOID:4362;6.85e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,8.34e-63,14;DOID:305,4.15e-13,106;DOID:3151,4.52e-09,1;DOID:3149,4.52e-09,1;DOID:0050687,5.50e-09,143;DOID:178,1.05e-08,1;DOID:326,1.05e-08,1;DOID:3978,1.05e-08,1;DOID:3394,1.05e-08,1;DOID:5844,1.05e-08,1;DOID:4362,7.48e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.05e-15!72;UBERON:0000065!1.94e-13!53;UBERON:0000344!3.90e-13!12;UBERON:0004119!9.22e-13!169;UBERON:0000925!9.22e-13!169;UBERON:0006595!9.22e-13!169;UBERON:0003729!9.88e-12!5;UBERON:0000072!2.30e-10!46;UBERON:0005631!3.39e-10!14;UBERON:0000158!3.39e-10!14;UBERON:0003343!6.12e-10!4;UBERON:0004785!6.12e-10!4;UBERON:0001557!9.91e-10!19;UBERON:0000974!1.36e-09!10;UBERON:0001007!3.02e-09!155;UBERON:0001555!3.02e-09!155;UBERON:0007026!3.02e-09!155;UBERON:0006562!2.88e-08!11;UBERON:0000161!3.19e-08!35;UBERON:0000166!3.42e-08!21;UBERON:0004923!4.12e-08!57;UBERON:0000077!5.76e-08!130;UBERON:0000064!6.56e-08!219;UBERON:0001723!2.14e-07!3;UBERON:0001033!2.14e-07!3;UBERON:0010056!2.14e-07!3;UBERON:0004921!2.29e-07!129;UBERON:0004185!2.29e-07!129;UBERON:0003124!7.10e-07!7;UBERON:0000165!7.46e-07!28;UBERON:0000930!7.46e-07!28 | |ontology_enrichment_uberon=UBERON:0001004!3.05e-15!72;UBERON:0000065!1.94e-13!53;UBERON:0000344!3.90e-13!12;UBERON:0004119!9.22e-13!169;UBERON:0000925!9.22e-13!169;UBERON:0006595!9.22e-13!169;UBERON:0003729!9.88e-12!5;UBERON:0000072!2.30e-10!46;UBERON:0005631!3.39e-10!14;UBERON:0000158!3.39e-10!14;UBERON:0003343!6.12e-10!4;UBERON:0004785!6.12e-10!4;UBERON:0001557!9.91e-10!19;UBERON:0000974!1.36e-09!10;UBERON:0001007!3.02e-09!155;UBERON:0001555!3.02e-09!155;UBERON:0007026!3.02e-09!155;UBERON:0006562!2.88e-08!11;UBERON:0000161!3.19e-08!35;UBERON:0000166!3.42e-08!21;UBERON:0004923!4.12e-08!57;UBERON:0000077!5.76e-08!130;UBERON:0000064!6.56e-08!219;UBERON:0001723!2.14e-07!3;UBERON:0001033!2.14e-07!3;UBERON:0010056!2.14e-07!3;UBERON:0004921!2.29e-07!129;UBERON:0004185!2.29e-07!129;UBERON:0003124!7.10e-07!7;UBERON:0000165!7.46e-07!28;UBERON:0000930!7.46e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.52e-31;4!UBERON:0004785;7.52e-31;4!UBERON:0000974;1.16e-20;6!UBERON:0003127;2.79e-15;2!UBERON:0001723;7.67e-11;3!UBERON:0001033;7.67e-11;3!UBERON:0003126;7.36e-10;7!UBERON:0001005;7.36e-10;7!UBERON:0003729;1.26e-09;13!UBERON:0000344;2.25e-09;20!UBERON:0000997;6.16e-09;1!UBERON:0005056;6.16e-09;1!UBERON:0004176;6.16e-09;1!UBERON:0004645;7.75e-09;1!UBERON:0001256;7.75e-09;1!UBERON:0001259;7.75e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0003343;7.52e-31;4!UBERON:0004785;7.52e-31;4!UBERON:0000974;1.16e-20;6!UBERON:0003127;2.79e-15;2!UBERON:0001723;7.67e-11;3!UBERON:0001033;7.67e-11;3!UBERON:0003126;7.36e-10;7!UBERON:0001005;7.36e-10;7!UBERON:0003729;1.26e-09;13!UBERON:0000344;2.25e-09;20!UBERON:0000997;6.16e-09;1!UBERON:0005056;6.16e-09;1!UBERON:0004176;6.16e-09;1!UBERON:0004645;7.75e-09;1!UBERON:0001256;7.75e-09;1!UBERON:0001259;7.75e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.22e-31,4;UBERON:0004785,6.22e-31,4;UBERON:0003127,2.79e-15,2;UBERON:0000974,1.66e-12,10;UBERON:0001723,7.67e-11,3;UBERON:0001033,7.67e-11,3;UBERON:0010056,7.67e-11,3;UBERON:0003126,7.60e-10,7;UBERON:0001005,7.60e-10,7;UBERON:0003729,1.19e-09,13;UBERON:0000344,2.15e-09,20;UBERON:0000997,5.70e-09,1;UBERON:0005056,5.70e-09,1;UBERON:0004645,7.75e-09,1;UBERON:0001256,7.75e-09,1;UBERON:0001259,7.75e-09,1;UBERON:0000166,1.92e-08,22;UBERON:0001004,2.59e-08,74;UBERON:0000161,4.67e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.425325291727159,0.985143749731331,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,1.15314040419064,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,2.17781969722645,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67268212749375,0.614321404198464,0,0,0,0.16480387422676,3.1668811219199,0,0,0,0,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0,0,1.82069517256799,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,4.60098356119391,0.230850775511391,0,0,0.269272933229316,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02224937621568,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,4.70363507589013,2.08942095792966,0.698906672968121,0,0,0.0730893170861856,0.0821154570532092,0.969890164884194,0,0.451961481561065,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70869375198532,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4901426398633,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72961330303897,7.66803201760312,6.78685814530212,5.77628330751691,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,7.53798323073612,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.299823467774787,0.892769693028288,1.05868461514708,0.722172300202514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.852935927603924,0,0.0645889098360061,0.186224142887574,0,0,0,1.30630048738177,0.684466602170562,0.471464371102113,1.00411087549747,1.99596213927608,3.5003405502719,0,0,0,4.69281884806909,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.425325291727159,0.985143749731331,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,1.15314040419064,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,2.17781969722645,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67268212749375,0.614321404198464,0,0,0,0.16480387422676,3.1668811219199,0,0,0,0,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0,0,1.82069517256799,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,4.60098356119391,0.230850775511391,0,0,0.269272933229316,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02224937621568,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,4.70363507589013,2.08942095792966,0.698906672968121,0,0,0.0730893170861856,0.0821154570532092,0.969890164884194,0,0.451961481561065,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70869375198532,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4901426398633,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72961330303897,7.66803201760312,6.78685814530212,5.77628330751691,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,7.53798323073612,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.299823467774787,0.892769693028288,1.05868461514708,0.722172300202514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.852935927603924,0,0.0645889098360061,0.186224142887574,0,0,0,1.30630048738177,0.684466602170562,0.471464371102113,1.00411087549747,1.99596213927608,3.5003405502719,0,0,0,4.69281884806909,0,0,0,0.402547587182052,0 | ||
|short_description=p2@GPR87 | |short_description=p2@GPR87 | ||
}} | }} |
Revision as of 00:20, 16 November 2012
Short description: | p2@GPR87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPR87_5end |
Coexpression cluster: | NA |
Association with transcript: | 201bp_to_NM_023915, uc003eyt.2_5end |
EntrezGene: | GPR87 |
HGNC: | 4538 |
UniProt: | Q9BY21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.67e-12 | 63 |
endo-epithelial cell | 2.42e-10 | 42 |
epithelial cell of alimentary canal | 1.83e-09 | 20 |
endodermal cell | 3.84e-09 | 58 |
bladder cell | 7.75e-09 | 1 |
lower urinary tract cell | 7.75e-09 | 1 |
epithelial cell | 4.42e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.22e-31 | 4 |
respiratory system mucosa | 6.22e-31 | 4 |
open tracheal system trachea | 2.79e-15 | 2 |
neck | 1.66e-12 | 10 |
tongue | 7.67e-11 | 3 |
gustatory system | 7.67e-11 | 3 |
future tongue | 7.67e-11 | 3 |
trachea | 7.60e-10 | 7 |
respiratory airway | 7.60e-10 | 7 |
mouth mucosa | 1.19e-09 | 13 |
mucosa | 2.15e-09 | 20 |
mammalian vulva | 5.70e-09 | 1 |
external female genitalia | 5.70e-09 | 1 |
urinary bladder urothelium | 7.75e-09 | 1 |
wall of urinary bladder | 7.75e-09 | 1 |
mucosa of urinary bladder | 7.75e-09 | 1 |
oral opening | 1.92e-08 | 22 |
respiratory system | 2.59e-08 | 74 |
orifice | 4.67e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.34e-63 | 14 |
carcinoma | 4.15e-13 | 106 |
skin squamous cell carcinoma | 4.52e-09 | 1 |
keratoacanthoma | 4.52e-09 | 1 |
cell type cancer | 5.50e-09 | 143 |
vascular disease | 1.05e-08 | 1 |
ischemia | 1.05e-08 | 1 |
extrinsic cardiomyopathy | 1.05e-08 | 1 |
myocardial ischemia | 1.05e-08 | 1 |
myocardial infarction | 1.05e-08 | 1 |
cervical cancer | 7.48e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.