FFCP PHASE1:Hg19::chr4:143489426..143489437,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!6.62e-15!18;CL:0000789!6.62e-15!18;CL:0002420!6.62e-15!18;CL:0002419!6.62e-15!18;CL:0000790!6.62e-15!18;CL:0000624!4.75e-13!6;CL:0000838!1.18e-10!52;CL:0000542!2.21e-10!53;CL:0000051!2.21e-10!53;CL:0000084!3.91e-10!25;CL:0000827!3.91e-10!25;CL:0000842!2.88e-09!3;CL:0000224!4.80e-07!4 | |ontology_enrichment_celltype=CL:0000791!6.62e-15!18;CL:0000789!6.62e-15!18;CL:0002420!6.62e-15!18;CL:0002419!6.62e-15!18;CL:0000790!6.62e-15!18;CL:0000624!4.75e-13!6;CL:0000838!1.18e-10!52;CL:0000542!2.21e-10!53;CL:0000051!2.21e-10!53;CL:0000084!3.91e-10!25;CL:0000827!3.91e-10!25;CL:0000842!2.88e-09!3;CL:0000224!4.80e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.66e-15;1!CL:0002625;1.66e-15;1!CL:0000216;1.66e-15;1 | |ontology_enrichment_celltype_v019=CL:0000511;1.66e-15;1!CL:0002625;1.66e-15;1!CL:0000216;1.66e-15;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.78e-15,1;CL:0002625,1.78e-15,1;CL:0000216,1.78e-15,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4929!2.28e-07!2 | |ontology_enrichment_disease=DOID:4929!2.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:299;2.05e-09;25!DOID:3493;1.29e-08;2!DOID:4929;2.07e-08;2 | |ontology_enrichment_disease_v019=DOID:299;2.05e-09;25!DOID:3493;1.29e-08;2!DOID:4929;2.07e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:299,2.26e-09,25;DOID:3493,1.29e-08,2;DOID:4929,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.61e-08!35;UBERON:0000160!1.09e-07!27;UBERON:0002394!3.33e-07!4;UBERON:0003928!3.33e-07!4;UBERON:0002294!5.11e-07!7;UBERON:0001173!5.11e-07!7;UBERON:0004912!5.11e-07!7;UBERON:0003127!5.18e-07!2 | |ontology_enrichment_uberon=UBERON:0005409!2.61e-08!35;UBERON:0000160!1.09e-07!27;UBERON:0002394!3.33e-07!4;UBERON:0003928!3.33e-07!4;UBERON:0002294!5.11e-07!7;UBERON:0001173!5.11e-07!7;UBERON:0004912!5.11e-07!7;UBERON:0003127!5.18e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.56e-26;4!UBERON:0005409;5.60e-22;22!UBERON:0000160;9.02e-20;17!UBERON:0001136;1.66e-15;1!UBERON:0001343;1.66e-15;1!UBERON:0004910;1.66e-15;1!UBERON:0004813;1.66e-15;1!UBERON:0004921;1.48e-12;33!UBERON:0004909;2.07e-08;2!UBERON:0001155;3.14e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.56e-26;4!UBERON:0005409;5.60e-22;22!UBERON:0000160;9.02e-20;17!UBERON:0001136;1.66e-15;1!UBERON:0001343;1.66e-15;1!UBERON:0004910;1.66e-15;1!UBERON:0004813;1.66e-15;1!UBERON:0004921;1.48e-12;33!UBERON:0004909;2.07e-08;2!UBERON:0001155;3.14e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.16e-26,4;UBERON:0000160,6.87e-20,17;UBERON:0005409,1.92e-19,25;UBERON:0001136,1.78e-15,1;UBERON:0001343,1.78e-15,1;UBERON:0004910,1.78e-15,1;UBERON:0005154,1.78e-15,1;UBERON:0005295,1.78e-15,1;UBERON:0004813,1.78e-15,1;UBERON:0005297,1.78e-15,1;UBERON:0005294,1.78e-15,1;UBERON:0010141,1.78e-15,1;UBERON:0005891,1.78e-15,1;UBERON:0004909,2.15e-08,2;UBERON:0001155,2.68e-07,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.328402357799783,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7703879310245,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0.946895611469467,1.94826728407911,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0.535081656179426,0,0.113309342697566,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.0898683511473268,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,1.94606641907346,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,1.00863292007874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31644057466312,0,0,0,0,0,0,0,0,0,0,4.93914611890846,1.96703604453562,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,1.3473780315988,0,0,0,0,0,0 | ||
|short_description=p@chr4:143489426..143489437,- | |short_description=p@chr4:143489426..143489437,- | ||
}} | }} |
Revision as of 09:47, 17 November 2012
Short description: | p@chr4:143489426..143489437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:143489426..143489437, - |
Coexpression cluster: | C4375_small_adenocarcinoma_signet_colon_CD4_papillotubular_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.78e-15 | 1 |
seminiferous tubule epithelial cell | 1.78e-15 | 1 |
Sertoli cell | 1.78e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.16e-26 | 4 |
intestine | 6.87e-20 | 17 |
gastrointestinal system | 1.92e-19 | 25 |
mesothelium | 1.78e-15 | 1 |
seminiferous tubule of testis | 1.78e-15 | 1 |
epithelium of male gonad | 1.78e-15 | 1 |
epithelial cord | 1.78e-15 | 1 |
sex cord | 1.78e-15 | 1 |
seminiferous tubule epithelium | 1.78e-15 | 1 |
testis sex cord | 1.78e-15 | 1 |
genital ridge | 1.78e-15 | 1 |
primitive sex cord of indifferent gonad | 1.78e-15 | 1 |
coelomic epithelium | 1.78e-15 | 1 |
epithelium of gonad | 2.15e-08 | 2 |
colon | 2.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.26e-09 | 25 |
signet ring cell adenocarcinoma | 1.29e-08 | 2 |
tubular adenocarcinoma | 2.31e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.