FFCP PHASE1:Hg19::chr5:133984515..133984539,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000034!5.16e-12!444;CL:0000048!5.18e-12!430;CL:0000012!1.14e-11!682;CL:0000548!1.93e-11!679;CL:0000004!1.93e-11!679;CL:0000255!1.93e-11!679;CL:0000723!8.54e-11!436;CL:0000144!2.98e-10!625;CL:0000055!3.13e-10!180;CL:0002057!3.92e-10!42;CL:0000860!1.95e-09!45;CL:0002371!5.39e-09!591;CL:0000359!3.20e-08!32;CL:0000192!8.33e-07!42;CL:0000514!8.33e-07!42 | |ontology_enrichment_celltype=CL:0000034!5.16e-12!444;CL:0000048!5.18e-12!430;CL:0000012!1.14e-11!682;CL:0000548!1.93e-11!679;CL:0000004!1.93e-11!679;CL:0000255!1.93e-11!679;CL:0000723!8.54e-11!436;CL:0000144!2.98e-10!625;CL:0000055!3.13e-10!180;CL:0002057!3.92e-10!42;CL:0000860!1.95e-09!45;CL:0002371!5.39e-09!591;CL:0000359!3.20e-08!32;CL:0000192!8.33e-07!42;CL:0000514!8.33e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.20e-14;33!CL:0002057;6.20e-14;33!CL:0000473;1.80e-08;39!CL:0000234;1.80e-08;39!CL:0000359;5.51e-08;32 | |ontology_enrichment_celltype_v019=CL:0000860;6.20e-14;33!CL:0002057;6.20e-14;33!CL:0000473;1.80e-08;39!CL:0000234;1.80e-08;39!CL:0000359;5.51e-08;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.46e-12,441;CL:0000048,3.28e-12,427;CL:0000723,4.60e-11,433;CL:0000860,1.82e-10,42;CL:0002057,1.82e-10,42;CL:0000359,2.82e-08,32;CL:0000473,2.27e-07,48;CL:0000234,2.27e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.59e-10!448;UBERON:0004120!2.59e-10!448;UBERON:0006603!2.59e-10!448;UBERON:0002204!4.41e-09!167;UBERON:0001637!6.47e-08!42;UBERON:0003509!6.47e-08!42;UBERON:0004572!6.47e-08!42;UBERON:0000055!1.21e-07!69;UBERON:0002405!1.73e-07!115;UBERON:0003914!3.04e-07!118;UBERON:0001981!3.80e-07!60;UBERON:0007500!3.80e-07!60;UBERON:0004537!3.80e-07!60;UBERON:0006965!3.80e-07!60;UBERON:0002384!4.48e-07!375;UBERON:0002049!7.24e-07!79;UBERON:0007798!7.24e-07!79;UBERON:0004573!8.70e-07!33;UBERON:0004571!8.70e-07!33;UBERON:0004872!9.72e-07!84 | |ontology_enrichment_uberon=UBERON:0000926!2.59e-10!448;UBERON:0004120!2.59e-10!448;UBERON:0006603!2.59e-10!448;UBERON:0002204!4.41e-09!167;UBERON:0001637!6.47e-08!42;UBERON:0003509!6.47e-08!42;UBERON:0004572!6.47e-08!42;UBERON:0000055!1.21e-07!69;UBERON:0002405!1.73e-07!115;UBERON:0003914!3.04e-07!118;UBERON:0001981!3.80e-07!60;UBERON:0007500!3.80e-07!60;UBERON:0004537!3.80e-07!60;UBERON:0006965!3.80e-07!60;UBERON:0002384!4.48e-07!375;UBERON:0002049!7.24e-07!79;UBERON:0007798!7.24e-07!79;UBERON:0004573!8.70e-07!33;UBERON:0004571!8.70e-07!33;UBERON:0004872!9.72e-07!84 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.32e-09,167;UBERON:0000926,8.04e-09,315;UBERON:0004120,8.04e-09,315;UBERON:0006603,8.04e-09,315;UBERON:0001637,7.12e-08,42;UBERON:0003509,7.12e-08,42;UBERON:0004572,7.12e-08,42;UBERON:0003914,1.86e-07,117;UBERON:0002384,2.76e-07,371;UBERON:0003081,2.97e-07,203;UBERON:0000055,3.46e-07,68;UBERON:0004573,9.82e-07,33;UBERON:0004571,9.82e-07,33 | |||
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| ||
|short_description=p2@SEC24A | |short_description=p2@SEC24A | ||
}} | }} |
Revision as of 11:51, 17 November 2012
Short description: | p2@SEC24A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SEC24A_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000322887_5end |
EntrezGene: | SEC24A |
HGNC: | 10703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.46e-12 | 441 |
multi fate stem cell | 3.28e-12 | 427 |
somatic stem cell | 4.60e-11 | 433 |
classical monocyte | 1.82e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-10 | 42 |
vascular associated smooth muscle cell | 2.82e-08 | 32 |
defensive cell | 2.27e-07 | 48 |
phagocyte | 2.27e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.32e-09 | 167 |
mesoderm | 8.04e-09 | 315 |
mesoderm-derived structure | 8.04e-09 | 315 |
presumptive mesoderm | 8.04e-09 | 315 |
artery | 7.12e-08 | 42 |
arterial blood vessel | 7.12e-08 | 42 |
arterial system | 7.12e-08 | 42 |
epithelial tube | 1.86e-07 | 117 |
connective tissue | 2.76e-07 | 371 |
lateral plate mesoderm | 2.97e-07 | 203 |
vessel | 3.46e-07 | 68 |
systemic artery | 9.82e-07 | 33 |
systemic arterial system | 9.82e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.