FFCP PHASE1:Hg19::chr20:48140671..48140693,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!4.82e-12!75;CL:0000055!5.30e-11!180;CL:0002334!2.68e-09!12;CL:1000306!6.11e-07!4;CL:0002547!6.11e-07!4 | |ontology_enrichment_celltype=CL:0000057!4.82e-12!75;CL:0000055!5.30e-11!180;CL:0002334!2.68e-09!12;CL:1000306!6.11e-07!4;CL:0002547!6.11e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002596;4.03e-14;2!CL:0000214;1.96e-10;3!CL:0000135;5.86e-10;3!CL:0000388;5.86e-10;3!CL:0002581;2.80e-08;1!CL:0002591;6.62e-08;1 | |ontology_enrichment_celltype_v019=CL:0002596;4.03e-14;2!CL:0000214;1.96e-10;3!CL:0000135;5.86e-10;3!CL:0000388;5.86e-10;3!CL:0002581;2.80e-08;1!CL:0002591;6.62e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002596,2.21e-14,2;CL:0000214,1.92e-10,3;CL:0000135,5.01e-10,3;CL:0000388,5.01e-10,3;CL:0002581,2.35e-08,1;CL:0002591,8.12e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.62e-08;1 | |ontology_enrichment_development_v019=UBERON:0006242;6.62e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;6.62e-08;1!DOID:2394;1.09e-07;14 | |ontology_enrichment_disease_v019=DOID:3369;6.62e-08;1!DOID:2394;1.09e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,4.40e-08,1;DOID:2394,9.27e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000948!8.57e-11!24;UBERON:0005498!8.57e-11!24;UBERON:0004140!8.57e-11!24;UBERON:0009881!8.57e-11!24;UBERON:0004141!8.57e-11!24;UBERON:0003084!8.57e-11!24;UBERON:0007005!8.57e-11!24;UBERON:0004139!8.57e-11!24;UBERON:0004291!8.57e-11!24;UBERON:0007100!1.05e-10!27;UBERON:0004872!2.59e-09!84;UBERON:0001009!4.89e-09!113;UBERON:0004535!8.89e-09!110;UBERON:0001637!8.90e-08!42;UBERON:0003509!8.90e-08!42;UBERON:0004572!8.90e-08!42;UBERON:0002049!1.34e-07!79;UBERON:0007798!1.34e-07!79;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0001981!6.06e-07!60;UBERON:0007500!6.06e-07!60;UBERON:0004537!6.06e-07!60;UBERON:0006965!6.06e-07!60;UBERON:0000415!6.11e-07!4;UBERON:0007240!6.11e-07!4;UBERON:0005742!6.11e-07!4;UBERON:0005734!6.11e-07!4;UBERON:0004664!6.11e-07!4;UBERON:0004663!6.11e-07!4 | |ontology_enrichment_uberon=UBERON:0000948!8.57e-11!24;UBERON:0005498!8.57e-11!24;UBERON:0004140!8.57e-11!24;UBERON:0009881!8.57e-11!24;UBERON:0004141!8.57e-11!24;UBERON:0003084!8.57e-11!24;UBERON:0007005!8.57e-11!24;UBERON:0004139!8.57e-11!24;UBERON:0004291!8.57e-11!24;UBERON:0007100!1.05e-10!27;UBERON:0004872!2.59e-09!84;UBERON:0001009!4.89e-09!113;UBERON:0004535!8.89e-09!110;UBERON:0001637!8.90e-08!42;UBERON:0003509!8.90e-08!42;UBERON:0004572!8.90e-08!42;UBERON:0002049!1.34e-07!79;UBERON:0007798!1.34e-07!79;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0001981!6.06e-07!60;UBERON:0007500!6.06e-07!60;UBERON:0004537!6.06e-07!60;UBERON:0006965!6.06e-07!60;UBERON:0000415!6.11e-07!4;UBERON:0007240!6.11e-07!4;UBERON:0005742!6.11e-07!4;UBERON:0005734!6.11e-07!4;UBERON:0004664!6.11e-07!4;UBERON:0004663!6.11e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005396;4.03e-14;2!UBERON:0006915;1.96e-10;3!UBERON:0007616;1.96e-10;3!UBERON:0002217;1.96e-10;3!UBERON:0002018;1.96e-10;3!UBERON:0007846;5.86e-10;3!UBERON:0000043;5.86e-10;3!UBERON:0007845;5.86e-10;3!UBERON:0004457;1.88e-07;9!UBERON:0000042;1.88e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005396;4.03e-14;2!UBERON:0006915;1.96e-10;3!UBERON:0007616;1.96e-10;3!UBERON:0002217;1.96e-10;3!UBERON:0002018;1.96e-10;3!UBERON:0007846;5.86e-10;3!UBERON:0000043;5.86e-10;3!UBERON:0007845;5.86e-10;3!UBERON:0004457;1.88e-07;9!UBERON:0000042;1.88e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,2.21e-14,2;UBERON:0006915,1.92e-10,3;UBERON:0007616,1.92e-10,3;UBERON:0002217,1.92e-10,3;UBERON:0002018,1.92e-10,3;UBERON:0007846,5.01e-10,3;UBERON:0000043,5.01e-10,3;UBERON:0007845,5.01e-10,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0.397227542439656,3.15520282823695,0.709336764396714,1.12135520028461,1.06748995729705,0.24666754841716,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.412210116953756,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0.871533458600294,4.29883862082845,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,4.5481500811197,0,0,0,0.173767228936166,0,1.02943027143257,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.841980283299221,1.02511319404561,0,0.482561763430822,2.96836132889982,0,0.710246901252508,0,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.616067160352178,0,0,0,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0,1.27281299170375,1.56989728039846,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.424216295861138,1.13008116620243,2.2054613741845,1.32687795048244,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,3.58882980006029,6.25660296623814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,1.06726497369676,2.79733453414982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0.858452096273142,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,1.10961172300523,0,0.251567901752575,0,0.228840068396924,0.604923695052956,0.310874401165561,0,0,0,0.465788870628778,0,0,0,1.20206087197775,1.90402606084398,1.22061219961398,0,0.537052785212442,0.928067519756987,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0.358177682162975,0,2.85069264452319,0,0.192914038270915,1.35153952522458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0.488965776731466,0,0.665756774185513,0,0 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| ||
|short_description=p@chr20:48140671..48140693,- | |short_description=p@chr20:48140671..48140693,- | ||
}} | }} |
Revision as of 07:44, 19 November 2012
Short description: | p@chr20:48140671..48140693, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:48140671..48140693, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 2.21e-14 | 2 |
synovial cell | 1.92e-10 | 3 |
fibrocyte | 5.01e-10 | 3 |
tendon cell | 5.01e-10 | 3 |
perirenal preadipocyte | 2.35e-08 | 1 |
smooth muscle cell of the pulmonary artery | 8.12e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 2.21e-14 | 2 |
stratified squamous epithelium | 1.92e-10 | 3 |
layer of synovial tissue | 1.92e-10 | 3 |
synovial joint | 1.92e-10 | 3 |
synovial membrane of synovial joint | 1.92e-10 | 3 |
dense regular connective tissue | 5.01e-10 | 3 |
tendon | 5.01e-10 | 3 |
regular connective tissue | 5.01e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.40e-08 | 1 |
ovarian cancer | 9.27e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.