FFCP PHASE1:Hg19::chr4:110749119..110749137,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000349!1.18e-52!5;UBERON:0002619!1.43e-34!22;UBERON:0001954!8.39e-34!2;UBERON:0003022!8.39e-34!2;UBERON:0002421!8.39e-34!2;UBERON:0002600!8.39e-34!2;UBERON:0001869!2.57e-31!32;UBERON:0000956!1.46e-30!25;UBERON:0000203!1.46e-30!25;UBERON:0002791!2.20e-30!33;UBERON:0002020!1.66e-29!34;UBERON:0003528!1.66e-29!34;UBERON:0001893!1.66e-29!34;UBERON:0002780!1.60e-24!41;UBERON:0001890!1.60e-24!41;UBERON:0006240!1.60e-24!41;UBERON:0003080!6.07e-24!42;UBERON:0003056!6.76e-21!61;UBERON:0001950!1.18e-19!20;UBERON:0002702!3.75e-18!1;UBERON:0001882!6.23e-18!1;UBERON:0005403!6.23e-18!1;UBERON:0003112!7.37e-18!1;UBERON:0000032!7.37e-18!1;UBERON:0005253!7.37e-18!1;UBERON:0003128!7.37e-18!1;UBERON:0002241!7.37e-18!1;UBERON:0001703!7.37e-18!1;UBERON:0004761!7.37e-18!1;UBERON:0009617!7.37e-18!1;UBERON:0001049!1.24e-17!57;UBERON:0005068!1.24e-17!57;UBERON:0006241!1.24e-17!57;UBERON:0007135!1.24e-17!57;UBERON:0002022!1.70e-17!1;UBERON:0002616!4.97e-17!59;UBERON:0003075!1.04e-14!86;UBERON:0007284!1.04e-14!86;UBERON:0005743!1.55e-14!86;UBERON:0000955!2.59e-14!69;UBERON:0006238!2.59e-14!69;UBERON:0002346!4.92e-14!90;UBERON:0007023!1.37e-13!115;UBERON:0000073!4.01e-13!94;UBERON:0001016!4.01e-13!94;UBERON:0000033!1.94e-12!123;UBERON:0000200!3.85e-12!6;UBERON:0001017!5.17e-12!82;UBERON:0000153!7.86e-12!129;UBERON:0007811!7.86e-12!129;UBERON:0001870!9.46e-10!2;UBERON:0001876!1.71e-09!2;UBERON:0001871!3.27e-09!7;UBERON:0002420!2.85e-08!9;UBERON:0007245!2.85e-08!9;UBERON:0010009!2.85e-08!9;UBERON:0010011!2.85e-08!9;UBERON:0000454!2.85e-08!9;UBERON:0004121!4.61e-07!169;UBERON:0000924!6.98e-07!173;UBERON:0006601!6.98e-07!173;UBERON:0002771!7.28e-07!3 | |ontology_enrichment_uberon=UBERON:0000349!1.18e-52!5;UBERON:0002619!1.43e-34!22;UBERON:0001954!8.39e-34!2;UBERON:0003022!8.39e-34!2;UBERON:0002421!8.39e-34!2;UBERON:0002600!8.39e-34!2;UBERON:0001869!2.57e-31!32;UBERON:0000956!1.46e-30!25;UBERON:0000203!1.46e-30!25;UBERON:0002791!2.20e-30!33;UBERON:0002020!1.66e-29!34;UBERON:0003528!1.66e-29!34;UBERON:0001893!1.66e-29!34;UBERON:0002780!1.60e-24!41;UBERON:0001890!1.60e-24!41;UBERON:0006240!1.60e-24!41;UBERON:0003080!6.07e-24!42;UBERON:0003056!6.76e-21!61;UBERON:0001950!1.18e-19!20;UBERON:0002702!3.75e-18!1;UBERON:0001882!6.23e-18!1;UBERON:0005403!6.23e-18!1;UBERON:0003112!7.37e-18!1;UBERON:0000032!7.37e-18!1;UBERON:0005253!7.37e-18!1;UBERON:0003128!7.37e-18!1;UBERON:0002241!7.37e-18!1;UBERON:0001703!7.37e-18!1;UBERON:0004761!7.37e-18!1;UBERON:0009617!7.37e-18!1;UBERON:0001049!1.24e-17!57;UBERON:0005068!1.24e-17!57;UBERON:0006241!1.24e-17!57;UBERON:0007135!1.24e-17!57;UBERON:0002022!1.70e-17!1;UBERON:0002616!4.97e-17!59;UBERON:0003075!1.04e-14!86;UBERON:0007284!1.04e-14!86;UBERON:0005743!1.55e-14!86;UBERON:0000955!2.59e-14!69;UBERON:0006238!2.59e-14!69;UBERON:0002346!4.92e-14!90;UBERON:0007023!1.37e-13!115;UBERON:0000073!4.01e-13!94;UBERON:0001016!4.01e-13!94;UBERON:0000033!1.94e-12!123;UBERON:0000200!3.85e-12!6;UBERON:0001017!5.17e-12!82;UBERON:0000153!7.86e-12!129;UBERON:0007811!7.86e-12!129;UBERON:0001870!9.46e-10!2;UBERON:0001876!1.71e-09!2;UBERON:0001871!3.27e-09!7;UBERON:0002420!2.85e-08!9;UBERON:0007245!2.85e-08!9;UBERON:0010009!2.85e-08!9;UBERON:0010011!2.85e-08!9;UBERON:0000454!2.85e-08!9;UBERON:0004121!4.61e-07!169;UBERON:0000924!6.98e-07!173;UBERON:0006601!6.98e-07!173;UBERON:0002771!7.28e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6833451865381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7349139959622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6833451865381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7349139959622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@RRH | |short_description=p1@RRH | ||
}} | }} |
Revision as of 17:38, 19 November 2012
Short description: | p1@RRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RRH_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -12bp_to_ENST00000317735, NM_006583, uc003hzv.2_5end |
EntrezGene: | RRH |
HGNC: | 10450 |
UniProt: | O14718 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.