FFCP PHASE1:Hg19::chr14:64559917..64559954,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002076!2.67e-17!43;CL:0000223!1.71e-11!59;CL:0000622!9.56e-11!5;CL:0002251!1.15e-10!21;CL:0002623!2.12e-10!3;CL:0000154!5.86e-09!6;CL:0002537!6.79e-07!5 | |ontology_enrichment_celltype=CL:0002076!2.67e-17!43;CL:0000223!1.71e-11!59;CL:0000622!9.56e-11!5;CL:0002251!1.15e-10!21;CL:0002623!2.12e-10!3;CL:0000154!5.86e-09!6;CL:0002537!6.79e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.19e-12;5!CL:1000415;2.48e-08;2!CL:0002535;2.48e-08;2!CL:0000349;2.08e-07;19 | |ontology_enrichment_celltype_v019=CL:0002537;1.19e-12;5!CL:1000415;2.48e-08;2!CL:0002535;2.48e-08;2!CL:0000349;2.08e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.19e-12,5;CL:0002535,2.48e-08,2;CL:1000415,2.67e-08,2;CL:0000349,2.04e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.38e-15;1!UBERON:0008814;2.48e-08;2!UBERON:0010056;2.48e-08;2 | |ontology_enrichment_development_v019=UBERON:0009143;2.38e-15;1!UBERON:0008814;2.48e-08;2!UBERON:0010056;2.48e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;8.02e-16;1!DOID:326;8.02e-16;1!DOID:3978;8.02e-16;1!DOID:3394;8.02e-16;1!DOID:5844;8.02e-16;1!DOID:114;1.44e-08;2!DOID:3910;2.48e-08;2 | |ontology_enrichment_disease_v019=DOID:178;8.02e-16;1!DOID:326;8.02e-16;1!DOID:3978;8.02e-16;1!DOID:3394;8.02e-16;1!DOID:5844;8.02e-16;1!DOID:114;1.44e-08;2!DOID:3910;2.48e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:178,7.46e-16,1;DOID:326,7.46e-16,1;DOID:3978,7.46e-16,1;DOID:3394,7.46e-16,1;DOID:5844,7.46e-16,1;DOID:114,1.39e-08,2;DOID:3910,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.22e-09!72;UBERON:0000166!1.08e-08!21;UBERON:0005631!5.77e-08!14;UBERON:0000158!5.77e-08!14;UBERON:0004119!7.13e-08!169;UBERON:0000925!7.13e-08!169;UBERON:0006595!7.13e-08!169;UBERON:0000165!8.47e-08!28;UBERON:0000930!8.47e-08!28;UBERON:0000161!3.45e-07!35 | |ontology_enrichment_uberon=UBERON:0001004!5.22e-09!72;UBERON:0000166!1.08e-08!21;UBERON:0005631!5.77e-08!14;UBERON:0000158!5.77e-08!14;UBERON:0004119!7.13e-08!169;UBERON:0000925!7.13e-08!169;UBERON:0006595!7.13e-08!169;UBERON:0000165!8.47e-08!28;UBERON:0000930!8.47e-08!28;UBERON:0000161!3.45e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.02e-16;1!UBERON:0005631;1.41e-13;10!UBERON:0000158;1.41e-13;10!UBERON:0000305;2.69e-09;7!UBERON:0000341;1.73e-08;2!UBERON:0004903;2.48e-08;2!UBERON:0006955;2.48e-08;2!UBERON:0004801;2.48e-08;2!UBERON:0002173;2.48e-08;2!UBERON:0002186;2.48e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0007029;8.02e-16;1!UBERON:0005631;1.41e-13;10!UBERON:0000158;1.41e-13;10!UBERON:0000305;2.69e-09;7!UBERON:0000341;1.73e-08;2!UBERON:0004903;2.48e-08;2!UBERON:0006955;2.48e-08;2!UBERON:0004801;2.48e-08;2!UBERON:0002173;2.48e-08;2!UBERON:0002186;2.48e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,8.63e-16,1;UBERON:0005631,7.04e-10,14;UBERON:0000158,7.04e-10,14;UBERON:0000305,2.69e-09,7;UBERON:0000341,1.86e-08,2;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0004871,3.04e-08,8;UBERON:0004903,3.08e-08,2;UBERON:0002173,3.08e-08,2;UBERON:0002186,3.08e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1896029011137,0.296964680832639,26.1086596784347,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,1.91400695839152,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,1.74118413160805,0.698906672968121,0,0,0,0,1.93978032976839,0,0.677942222341597,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,3.99358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,2.75819975547194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0.207216164163037,0.17071847709395,2.76503864725637,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.55880778281177,0,0,0,0,0.700118741059814,0.404234377916439,1.95945073107265,0,0.606168477131288,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1896029011137,0.296964680832639,26.1086596784347,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,1.91400695839152,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,1.74118413160805,0.698906672968121,0,0,0,0,1.93978032976839,0,0.677942222341597,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,3.99358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,2.75819975547194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0.207216164163037,0.17071847709395,2.76503864725637,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.55880778281177,0,0,0,0,0.700118741059814,0.404234377916439,1.95945073107265,0,0.606168477131288,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:64559917..64559954,+ | |short_description=p@chr14:64559917..64559954,+ | ||
}} | }} |
Revision as of 23:56, 19 November 2012
Short description: | p@chr14:64559917..64559954, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:64559917..64559954, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.19e-12 | 5 |
epithelial cell of cervix | 2.48e-08 | 2 |
epithelial cell of gall bladder | 2.67e-08 | 2 |
extraembryonic cell | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface | 8.63e-16 | 1 |
extraembryonic membrane | 7.04e-10 | 14 |
membranous layer | 7.04e-10 | 14 |
amnion | 2.69e-09 | 7 |
throat | 1.86e-08 | 2 |
uterine epithelium | 2.48e-08 | 2 |
cervix epithelium | 2.48e-08 | 2 |
somatic layer of lateral plate mesoderm | 3.04e-08 | 8 |
bronchoalveolar duct junction | 3.08e-08 | 2 |
alveolar duct | 3.08e-08 | 2 |
bronchiole | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.46e-16 | 1 |
ischemia | 7.46e-16 | 1 |
extrinsic cardiomyopathy | 7.46e-16 | 1 |
myocardial ischemia | 7.46e-16 | 1 |
myocardial infarction | 7.46e-16 | 1 |
heart disease | 1.39e-08 | 2 |
lung adenocarcinoma | 3.08e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.