FFCP PHASE1:Hg19::chr6:75794403..75794415,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!1.18e-11!75;CL:0002620!3.21e-11!23;CL:0000136!2.77e-10!15;CL:0002334!3.14e-08!12;CL:0000055!5.50e-08!180 | |ontology_enrichment_celltype=CL:0000057!1.18e-11!75;CL:0002620!3.21e-11!23;CL:0000136!2.77e-10!15;CL:0002334!3.14e-08!12;CL:0000055!5.50e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.39e-19;13!CL:0002580;1.06e-16;3!CL:0002615;1.38e-16;3!CL:0002579;1.45e-16;3!CL:0002620;3.66e-16;23!CL:0000135;1.77e-15;3!CL:0000388;1.77e-15;3!CL:0002334;1.90e-15;12!CL:0002617;9.30e-12;2!CL:0000153;3.86e-09;9!CL:0000447;3.86e-09;9!CL:0000138;3.35e-08;6!CL:0000499;7.29e-08;28!CL:0000057;3.51e-07;73!CL:0002616;8.11e-07;1 | |ontology_enrichment_celltype_v019=CL:0000136;3.39e-19;13!CL:0002580;1.06e-16;3!CL:0002615;1.38e-16;3!CL:0002579;1.45e-16;3!CL:0002620;3.66e-16;23!CL:0000135;1.77e-15;3!CL:0000388;1.77e-15;3!CL:0002334;1.90e-15;12!CL:0002617;9.30e-12;2!CL:0000153;3.86e-09;9!CL:0000447;3.86e-09;9!CL:0000138;3.35e-08;6!CL:0000499;7.29e-08;28!CL:0000057;3.51e-07;73!CL:0002616;8.11e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.29e-22,76;CL:0000136,3.53e-21,15;CL:0002580,8.40e-17,3;CL:0002615,1.42e-16,3;CL:0002579,1.84e-16,3;CL:0002620,3.28e-16,23;CL:0002334,1.90e-15,12;CL:0000135,1.91e-15,3;CL:0000388,1.91e-15,3;CL:0000134,1.85e-12,354;CL:0002320,4.47e-12,361;CL:0002617,8.61e-12,2;CL:0000219,1.00e-10,386;CL:0000048,6.61e-10,427;CL:0000723,1.15e-09,433;CL:0000034,2.36e-09,441;CL:0000153,2.85e-09,9;CL:0000447,2.85e-09,9;CL:0000058,2.68e-08,6;CL:0000138,2.68e-08,6;CL:0000499,6.34e-08,28;CL:0002616,7.90e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!6.95e-09!5;DOID:450!6.95e-09!5;DOID:66!6.95e-09!5;DOID:423!6.95e-09!5;DOID:0080000!6.95e-09!5;DOID:11722!6.95e-09!5;DOID:2394!2.43e-08!14 | |ontology_enrichment_disease=DOID:17!6.95e-09!5;DOID:450!6.95e-09!5;DOID:66!6.95e-09!5;DOID:423!6.95e-09!5;DOID:0080000!6.95e-09!5;DOID:11722!6.95e-09!5;DOID:2394!2.43e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:17;4.03e-16;5!DOID:450;4.03e-16;5!DOID:66;4.03e-16;5!DOID:423;4.03e-16;5!DOID:0080000;4.03e-16;5!DOID:11722;4.03e-16;5 | |ontology_enrichment_disease_v019=DOID:17;4.03e-16;5!DOID:450;4.03e-16;5!DOID:66;4.03e-16;5!DOID:423;4.03e-16;5!DOID:0080000;4.03e-16;5!DOID:11722;4.03e-16;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.97e-16,5;DOID:450,3.97e-16,5;DOID:66,3.97e-16,5;DOID:423,3.97e-16,5;DOID:0080000,3.97e-16,5;DOID:11722,3.97e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.15e-11!6;UBERON:0002358!2.15e-11!6;UBERON:0003684!2.15e-11!6;UBERON:0001178!2.15e-11!6;UBERON:0002199!2.98e-09!45;UBERON:0002416!2.98e-09!45;UBERON:0004457!7.63e-09!12;UBERON:0000042!7.63e-09!12;UBERON:0002097!1.24e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!2.15e-11!6;UBERON:0002358!2.15e-11!6;UBERON:0003684!2.15e-11!6;UBERON:0001178!2.15e-11!6;UBERON:0002199!2.98e-09!45;UBERON:0002416!2.98e-09!45;UBERON:0004457!7.63e-09!12;UBERON:0000042!7.63e-09!12;UBERON:0002097!1.24e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.29e-31;6!UBERON:0002358;2.29e-31;6!UBERON:0003684;2.29e-31;6!UBERON:0001178;2.29e-31;6!UBERON:0004457;1.13e-27;9!UBERON:0000042;1.13e-27;9!UBERON:0007846;1.77e-15;3!UBERON:0000043;1.77e-15;3!UBERON:0007845;1.77e-15;3!UBERON:0000310;3.20e-13;10!UBERON:0001443;5.41e-12;11!UBERON:0002097;2.41e-08;41!UBERON:0002199;5.88e-08;46!UBERON:0002416;5.88e-08;46 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.29e-31;6!UBERON:0002358;2.29e-31;6!UBERON:0003684;2.29e-31;6!UBERON:0001178;2.29e-31;6!UBERON:0004457;1.13e-27;9!UBERON:0000042;1.13e-27;9!UBERON:0007846;1.77e-15;3!UBERON:0000043;1.77e-15;3!UBERON:0007845;1.77e-15;3!UBERON:0000310;3.20e-13;10!UBERON:0001443;5.41e-12;11!UBERON:0002097;2.41e-08;41!UBERON:0002199;5.88e-08;46!UBERON:0002416;5.88e-08;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.98e-31,6;UBERON:0002358,2.98e-31,6;UBERON:0003684,2.98e-31,6;UBERON:0001178,2.98e-31,6;UBERON:0004457,1.58e-20,12;UBERON:0000042,1.58e-20,12;UBERON:0007846,1.91e-15,3;UBERON:0000043,1.91e-15,3;UBERON:0007845,1.91e-15,3;UBERON:0000310,2.75e-13,10;UBERON:0002384,1.54e-12,371;UBERON:0001443,4.73e-12,11;UBERON:0002199,4.51e-11,46;UBERON:0002416,4.51e-11,46;UBERON:0002097,2.20e-10,41;UBERON:0004923,1.36e-08,66;UBERON:0003102,6.65e-07,99 | |||
|phase1_expression=5.08699461957559,3.63970890614671,4.51054093107108,4.00293193412522,2.23480547213644,6.97870819280295,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,2.50668955317945,1.73815822752988,0,0.486634870302636,0.189069634328136,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0,0.150238058906597,0,3.58779271377724,1.70845911054854,1.05965950579781,1.50045548042201,0.309157587715317,3.60696756063881,2.23340227597908,0.843881661206331,0.194874010322397,1.7670364197088,1.19664868234989,0.323292113637624,3.90510551768276,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.831883446123229,0.535286966391485,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,4.96215615637554,7.67309866440312,2.80660094433074,2.17836553734692,3.07024349440022,6.91671860917512,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0.354761064070598,0.844430541190656,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,1.38652688589425,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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| ||
|short_description=p5@AL359627 | |short_description=p5@AL359627 | ||
}} | }} |
Revision as of 04:59, 21 November 2012
Short description: | p5@AL359627 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AL359627_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 156bp_to_AL359627_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.29e-22 | 76 |
fat cell | 3.53e-21 | 15 |
preadipocyte of the breast | 8.40e-17 | 3 |
adipocyte of omentum tissue | 1.42e-16 | 3 |
omentum preadipocyte | 1.84e-16 | 3 |
skin fibroblast | 3.28e-16 | 23 |
preadipocyte | 1.90e-15 | 12 |
fibrocyte | 1.91e-15 | 3 |
tendon cell | 1.91e-15 | 3 |
mesenchymal cell | 1.85e-12 | 354 |
connective tissue cell | 4.47e-12 | 361 |
adipocyte of breast | 8.61e-12 | 2 |
motile cell | 1.00e-10 | 386 |
multi fate stem cell | 6.61e-10 | 427 |
somatic stem cell | 1.15e-09 | 433 |
stem cell | 2.36e-09 | 441 |
GAG secreting cell | 2.85e-09 | 9 |
carbohydrate secreting cell | 2.85e-09 | 9 |
chondroblast | 2.68e-08 | 6 |
chondrocyte | 2.68e-08 | 6 |
stromal cell | 6.34e-08 | 28 |
perirenal adipocyte cell | 7.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.98e-31 | 6 |
peritoneum | 2.98e-31 | 6 |
abdominal cavity | 2.98e-31 | 6 |
visceral peritoneum | 2.98e-31 | 6 |
cavity lining | 1.58e-20 | 12 |
serous membrane | 1.58e-20 | 12 |
dense regular connective tissue | 1.91e-15 | 3 |
tendon | 1.91e-15 | 3 |
regular connective tissue | 1.91e-15 | 3 |
breast | 2.75e-13 | 10 |
connective tissue | 1.54e-12 | 371 |
chest | 4.73e-12 | 11 |
integument | 4.51e-11 | 46 |
integumental system | 4.51e-11 | 46 |
skin of body | 2.20e-10 | 41 |
organ component layer | 1.36e-08 | 66 |
surface structure | 6.65e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.97e-16 | 5 |
myotonic disease | 3.97e-16 | 5 |
muscle tissue disease | 3.97e-16 | 5 |
myopathy | 3.97e-16 | 5 |
muscular disease | 3.97e-16 | 5 |
myotonic dystrophy | 3.97e-16 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.