FFCP PHASE1:Hg19::chr8:42623910..42623918,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000945!1.19e-14!24;CL:0000826!1.19e-14!24;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0000838!9.11e-09!52;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53 | |ontology_enrichment_celltype=CL:0000945!1.19e-14!24;CL:0000826!1.19e-14!24;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0000838!9.11e-09!52;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | |ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | ||
|ontology_enrichment_disease=DOID:2355!1.06e-11!1;DOID:0060058!7.99e-10!10 | |ontology_enrichment_disease=DOID:2355!1.06e-11!1;DOID:0060058!7.99e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0003112!2.96e-11!1;UBERON:0000032!2.96e-11!1;UBERON:0005253!2.96e-11!1;UBERON:0003128!2.96e-11!1;UBERON:0002241!2.96e-11!1;UBERON:0001703!2.96e-11!1;UBERON:0004761!2.96e-11!1;UBERON:0009617!2.96e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0004733!5.04e-08!12;UBERON:0002028!5.04e-08!12;UBERON:0007277!5.04e-08!12;UBERON:0004732!1.92e-07!13 | |ontology_enrichment_uberon=UBERON:0003112!2.96e-11!1;UBERON:0000032!2.96e-11!1;UBERON:0005253!2.96e-11!1;UBERON:0003128!2.96e-11!1;UBERON:0002241!2.96e-11!1;UBERON:0001703!2.96e-11!1;UBERON:0004761!2.96e-11!1;UBERON:0009617!2.96e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0004733!5.04e-08!12;UBERON:0002028!5.04e-08!12;UBERON:0007277!5.04e-08!12;UBERON:0004732!1.92e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002323;4.53e-08;45!UBERON:0002390;2.32e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002323;4.53e-08;45!UBERON:0002390;2.32e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29 | |||
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|short_description=p9@CHRNA6 | |short_description=p9@CHRNA6 | ||
}} | }} |
Revision as of 09:23, 21 November 2012
Short description: | p9@CHRNA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CHRNA6_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 10bp_to_ENST00000276410, NM_001199279, NM_004198_5end |
EntrezGene: | CHRNA6 |
HGNC: | 15963 |
UniProt: | Q15825B4DQH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.39e-66 | 3 |
gastrointestinal system mesentery | 2.39e-66 | 3 |
stomach region | 2.39e-66 | 3 |
mesentery | 2.39e-66 | 3 |
gastrointestinal system serosa | 2.39e-66 | 3 |
mesentery of stomach | 2.39e-66 | 3 |
gut mesentery | 2.39e-66 | 3 |
dorsal mesentery | 2.39e-66 | 3 |
dorsal mesogastrium | 2.39e-66 | 3 |
peritoneal cavity | 2.39e-66 | 3 |
spleen primordium | 2.39e-66 | 3 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
intraembryonic coelom | 6.76e-18 | 12 |
viscus | 1.85e-12 | 18 |
gastrointestinal system | 4.34e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.