FFCP PHASE1:Hg19::chr2:176957417..176957431,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3239 | |EntrezGene=3239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5136 | |HGNC=5136 | ||
|TSSclassifier=S | |||
|UniProt=P35453 | |UniProt=P35453 | ||
|association_with_transcript=-100bp_to_NM_000523,uc002ukf.1_5end | |association_with_transcript=-100bp_to_NM_000523,uc002ukf.1_5end | ||
Revision as of 02:03, 9 July 2013
| Short description: | p2@HOXD13 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_HOXD13_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -100bp_to_NM_000523, uc002ukf.1_5end |
| EntrezGene: | HOXD13 |
| HGNC: | 5136 |
| UniProt: | P35453 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@HOXD13 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lung fibroblast | 5.42e-15 | 1 |
| epithelial cell of large intestine | 4.09e-08 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 1.76e-11 | 5 |
| autonomic nervous system | 1.76e-11 | 5 |
| neural tissue | 5.74e-08 | 2 |
| peripheral nervous system | 9.10e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 2.57e-33 | 10 |
| germ cell and embryonal cancer | 1.76e-21 | 22 |
| germ cell cancer | 1.76e-21 | 22 |
| sarcoma | 5.92e-11 | 20 |
| cell type cancer | 5.27e-10 | 143 |
| neuroendocrine tumor | 1.01e-09 | 6 |
| cancer | 1.70e-09 | 235 |
| disease of cellular proliferation | 2.89e-09 | 239 |
| peripheral nerve sheath neoplasm | 5.74e-08 | 2 |
| neurofibroma | 5.74e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
