FFCP PHASE1:Hg19::chr11:111249993..111250006,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5450|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9211|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000526535,ENST00000530793_5end|coexpression_cluster_id=C442|description=CAGE_peak_1_at_POU2AF1_5end|id=chr11:111249993..111250006,-|ontology_enrichment_celltype=CL:0000542!3.87e-29!53;CL:0000051!3.87e-29!53;CL:0000838!3.31e-28!52;CL:0000945!2.21e-26!24;CL:0000826!2.21e-26!24;CL:0002087!1.45e-21!119;CL:0000738!9.66e-21!140;CL:0002031!5.05e-16!124;CL:0000236!9.28e-16!14;CL:0000037!1.62e-13!172;CL:0000566!1.62e-13!172;CL:0000988!5.97e-12!182;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0000084!6.86e-07!25;CL:0000827!6.86e-07!25|ontology_enrichment_celltype_v019=CL:0000945;3.53e-39;24!CL:0000236;2.05e-21;13!CL:0000542;4.20e-20;53!CL:0002087;7.10e-08;104|ontology_enrichment_celltype_v019_2=CL:0000945,3.60e-39,24;CL:0000826,3.60e-39,24;CL:0000542,1.02e-32,53;CL:0000051,1.02e-32,53;CL:0000838,2.08e-31,52;CL:0000236,4.84e-23,14;CL:0002087,2.57e-19,115;CL:0000738,3.76e-18,136;CL:0002031,5.54e-14,120;CL:0000037,4.39e-13,168;CL:0000988,1.18e-11,177;CL:0002032,4.00e-10,161;CL:0000837,4.00e-10,161|ontology_enrichment_development_v019=CL:0000051;4.20e-20;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;3.26e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.37e-08,10|ontology_enrichment_uberon=UBERON:0007023!2.21e-24!115;UBERON:0000178!7.13e-09!15;UBERON:0000179!7.13e-09!15;UBERON:0000463!7.13e-09!15|ontology_enrichment_uberon_v019=UBERON:0002390;8.86e-14;32!UBERON:0000178;2.09e-13;15!UBERON:0000179;2.09e-13;15!UBERON:0000463;2.09e-13;15!UBERON:0002193;4.39e-09;42!UBERON:0004177;1.00e-08;5!UBERON:0005057;1.00e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.15e-13,15;UBERON:0000179,2.15e-13,15;UBERON:0000463,2.15e-13,15;UBERON:0007023,9.46e-13,114;UBERON:0004177,3.24e-08,7;UBERON:0005057,3.24e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,235.429703109438,229.060644565349,250.457706140127,0.786728553697808,1.91914699048606,2.32224184974114,0.919421224478927,0.30120591877825,0,455.119803409272,383.146081553601,2.64240395401362,0,0.401088894940283,0,2.01523926815932,4.53451132426571,1.28787783817093,0,0.755751887377619,0,0,0.822335776043652,0,0,1.5369642391746,0,0,3.22742341791913,1.35426486594342,0.376484679085209,0.818718450173537,0,0,0.641858054152187,0,0.329851300186716,0.598390972864896,0,0,1.70215567407342,0,0,0.521482918420201,0,3.63239701580021,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,158.39662001519,209.171088113396,165.448721218621,178.799963255367,203.80155740133,225.302956462157,224.755256746853,179.362105852648,255.576623130142,233.133164180263,254.593969931402,2.64342657158052,6.1655941927969,9.2184429671277,2.9506465517075,0.786021525498329,1.43921049299656,0.83593247695339,1.95553359980154,2.36723902867367,0,2.33961959458865,2.94605907474837,3.98761010250518,6.77009659412539,3.5865569523189,6.24284868287415,2.30213066445147,1.93445012450094,3.76744011455568,0.889719378972363,1.60524496853828,3.1360657141493,0.453237370790265,3.44898444241729,5.49803912772208,2.78321661221453,0.318565414324097,0,1.90090408889675,0.301150238155546,0.76791966692651,2.49861453104692,1.65744076430812,1.64225599384209,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,4.71524671791765,0,0.741568885568859,0.324547393654683,0.174129737299267,1.86141144726411,0.953962497221368,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.386521706326594,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,3.5317047953172,0,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,0,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,18.1955862988141,8.41285383192606,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.16530741786592,0,0,1.33029046061003,0.459446800413919,27.4021708985371,19.1159301785594,15.3804740537024,28.1113495040191,27.561272296775,22.0480925805524,21.6012574895246,18.2418790547682,0,0,0,104.792990770905,134.747444919999,4.90878719104057,3.98565681822056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9211 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000526535,ENST00000530793_5end | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_1_at_POU2AF1_5end | |||
|id=chr11:111249993..111250006,- | |||
|ontology_enrichment_celltype=CL:0000542!3.87e-29!53;CL:0000051!3.87e-29!53;CL:0000838!3.31e-28!52;CL:0000945!2.21e-26!24;CL:0000826!2.21e-26!24;CL:0002087!1.45e-21!119;CL:0000738!9.66e-21!140;CL:0002031!5.05e-16!124;CL:0000236!9.28e-16!14;CL:0000037!1.62e-13!172;CL:0000566!1.62e-13!172;CL:0000988!5.97e-12!182;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0000084!6.86e-07!25;CL:0000827!6.86e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.53e-39;24!CL:0000236;2.05e-21;13!CL:0000542;4.20e-20;53!CL:0002087;7.10e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.60e-39,24;CL:0000826,3.60e-39,24;CL:0000542,1.02e-32,53;CL:0000051,1.02e-32,53;CL:0000838,2.08e-31,52;CL:0000236,4.84e-23,14;CL:0002087,2.57e-19,115;CL:0000738,3.76e-18,136;CL:0002031,5.54e-14,120;CL:0000037,4.39e-13,168;CL:0000988,1.18e-11,177;CL:0002032,4.00e-10,161;CL:0000837,4.00e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.20e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.26e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.37e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.21e-24!115;UBERON:0000178!7.13e-09!15;UBERON:0000179!7.13e-09!15;UBERON:0000463!7.13e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;8.86e-14;32!UBERON:0000178;2.09e-13;15!UBERON:0000179;2.09e-13;15!UBERON:0000463;2.09e-13;15!UBERON:0002193;4.39e-09;42!UBERON:0004177;1.00e-08;5!UBERON:0005057;1.00e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.15e-13,15;UBERON:0000179,2.15e-13,15;UBERON:0000463,2.15e-13,15;UBERON:0007023,9.46e-13,114;UBERON:0004177,3.24e-08,7;UBERON:0005057,3.24e-08,7 | |||
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| |||
|short_description=p1@POU2AF1 | |||
}} |
Revision as of 15:40, 10 September 2013
Short description: | p1@POU2AF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_POU2AF1_5end |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | 0bp_to_ENST00000526535, ENST00000530793_5end |
EntrezGene: | POU2AF1 |
HGNC: | 9211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.60e-39 | 24 |
pro-B cell | 3.60e-39 | 24 |
lymphocyte | 1.02e-32 | 53 |
common lymphoid progenitor | 1.02e-32 | 53 |
lymphoid lineage restricted progenitor cell | 2.08e-31 | 52 |
B cell | 4.84e-23 | 14 |
nongranular leukocyte | 2.57e-19 | 115 |
leukocyte | 3.76e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 5.54e-14 | 120 |
hematopoietic stem cell | 4.39e-13 | 168 |
hematopoietic cell | 1.18e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.00e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.15e-13 | 15 |
haemolymphatic fluid | 2.15e-13 | 15 |
organism substance | 2.15e-13 | 15 |
adult organism | 9.46e-13 | 114 |
hemopoietic organ | 3.24e-08 | 7 |
immune organ | 3.24e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.37e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.