FFCP PHASE1:Hg19::chr11:12108410..12108424,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-13bp_to_ENST00000527997_5end|coexpression_cluster_id=C1614|description=CAGE_peak_1_at_ENST00000527997_5end|id=chr11:12108410..12108424,+|ontology_enrichment_celltype=CL:0000359!1.84e-14!32;CL:0000220!3.04e-14!246;CL:0002321!7.34e-14!248;CL:0000055!8.84e-13!180;CL:0000192!2.26e-12!42;CL:0000514!2.26e-12!42;CL:0000680!3.61e-12!57;CL:0000056!3.61e-12!57;CL:0000355!3.61e-12!57;CL:0002371!7.05e-12!591;CL:0000144!4.21e-11!625;CL:0000187!6.84e-11!54;CL:0000183!1.20e-09!59;CL:0000548!1.63e-09!679;CL:0000004!1.63e-09!679;CL:0000255!1.63e-09!679;CL:0000012!3.49e-09!682;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60;CL:0002368!7.56e-08!13;CL:0000057!1.14e-07!75;CL:0002076!3.01e-07!43;CL:0000222!3.33e-07!119;CL:0002202!8.98e-07!9;CL:0002632!8.98e-07!9|ontology_enrichment_celltype_v019=CL:0000244;1.35e-10;4!CL:0000731;1.35e-10;4!CL:0000048;3.48e-09;58!CL:0000134;3.87e-09;55!CL:0000723;9.64e-09;61!CL:0002621;2.09e-08;3!CL:0000359;4.09e-08;32|ontology_enrichment_celltype_v019_2=CL:0000244,5.49e-11,4;CL:0000731,5.49e-11,4;CL:0000359,6.86e-09,32;CL:0002621,2.24e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.61e-12!14;DOID:120!1.86e-09!27;DOID:193!2.54e-08!29|ontology_enrichment_disease_v019=DOID:2394;1.69e-21;14!DOID:120;5.24e-14;27!DOID:193;8.15e-13;29|ontology_enrichment_disease_v019_2=DOID:2394,1.10e-21,14;DOID:120,4.65e-14,27;DOID:193,7.31e-13,29|ontology_enrichment_uberon=UBERON:0005256!1.04e-14!143;UBERON:0000914!1.21e-14!83;UBERON:0002329!1.21e-14!83;UBERON:0003077!1.21e-14!83;UBERON:0003059!1.21e-14!83;UBERON:0007282!1.21e-14!83;UBERON:0009618!1.21e-14!83;UBERON:0007285!1.21e-14!83;UBERON:0000486!2.76e-14!82;UBERON:0003914!7.52e-13!118;UBERON:0002100!1.26e-12!216;UBERON:0000475!4.90e-11!365;UBERON:0001637!6.58e-11!42;UBERON:0003509!6.58e-11!42;UBERON:0004572!6.58e-11!42;UBERON:0004290!7.00e-11!70;UBERON:0001134!1.56e-10!61;UBERON:0002036!1.56e-10!61;UBERON:0003082!1.56e-10!61;UBERON:0004872!1.64e-10!84;UBERON:0002385!1.91e-10!63;UBERON:0001015!1.91e-10!63;UBERON:0000383!1.91e-10!63;UBERON:0002049!3.79e-10!79;UBERON:0007798!3.79e-10!79;UBERON:0003102!4.11e-10!95;UBERON:0001981!4.56e-10!60;UBERON:0007500!4.56e-10!60;UBERON:0004537!4.56e-10!60;UBERON:0006965!4.56e-10!60;UBERON:0000490!1.73e-09!138;UBERON:0004535!1.20e-08!110;UBERON:0000055!1.63e-08!69;UBERON:0004573!2.04e-08!33;UBERON:0004571!2.04e-08!33;UBERON:0003104!5.15e-08!238;UBERON:0009142!5.15e-08!238;UBERON:0001009!5.24e-08!113;UBERON:0002199!6.56e-08!45;UBERON:0002416!6.56e-08!45;UBERON:0000119!1.27e-07!312;UBERON:0000483!1.96e-07!309;UBERON:0000467!9.10e-07!625|ontology_enrichment_uberon_v019=UBERON:0000486;1.26e-09;12!UBERON:0000992;1.68e-09;13!UBERON:0002118;3.67e-09;5!UBERON:0000365;1.79e-08;5!UBERON:0001949;2.09e-08;3!UBERON:0005910;4.71e-07;6!UBERON:0002119;9.00e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.68e-09,13;UBERON:0002118,3.30e-09,5;UBERON:0000486,4.57e-09,83;UBERON:0000365,8.85e-09,5;UBERON:0001637,9.38e-09,42;UBERON:0003509,9.38e-09,42;UBERON:0004572,9.38e-09,42;UBERON:0001949,2.24e-08,3;UBERON:0002199,1.37e-07,46;UBERON:0002416,1.37e-07,46;UBERON:0005910,2.64e-07,6;UBERON:0004573,2.93e-07,33;UBERON:0004571,2.93e-07,33;UBERON:0002119,9.97e-07,4|phase1_expression=0.726713517082227,0.428201047781966,1.12763523276777,0,0,0,2.53299878168311,0.631719873426831,0,0.737201809504527,2.09340350391728,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0,0.756278537312543,0.886917589850256,0.702678285545008,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0.66944122552934,0.805658634218294,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0.916008719652036,0,0,0.436094052142534,0.496971951695318,0.886413581652058,28.0707463324024,0,0,0.560677600142307,4.2699598291882,0.98667019366864,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0.61246251376468,0.245668634623536,0,0,0.247266929278557,0,0,0.673344455816265,0.125118519871964,1.6623846929051,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,3.58779271377724,0.427114777637135,0.423863802319124,2.40072876867522,0,0.772921620136887,0,16.2025278951616,0.292311015483596,3.5340728394176,0.184099797284599,0,1.42003837006646,0.403008392910561,1.18692414617341,2.51239109112286,2.18196896472668,1.43402297694502,0,0,0,0,0,0,1.56449532329816,0,0,1.85747171212792,0,0.118306800039844,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENST00000527997_5end | |||
|coexpression_cluster_id=C1614 | |||
|description=CAGE_peak_1_at_ENST00000527997_5end | |||
|id=chr11:12108410..12108424,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.84e-14!32;CL:0000220!3.04e-14!246;CL:0002321!7.34e-14!248;CL:0000055!8.84e-13!180;CL:0000192!2.26e-12!42;CL:0000514!2.26e-12!42;CL:0000680!3.61e-12!57;CL:0000056!3.61e-12!57;CL:0000355!3.61e-12!57;CL:0002371!7.05e-12!591;CL:0000144!4.21e-11!625;CL:0000187!6.84e-11!54;CL:0000183!1.20e-09!59;CL:0000548!1.63e-09!679;CL:0000004!1.63e-09!679;CL:0000255!1.63e-09!679;CL:0000012!3.49e-09!682;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60;CL:0002368!7.56e-08!13;CL:0000057!1.14e-07!75;CL:0002076!3.01e-07!43;CL:0000222!3.33e-07!119;CL:0002202!8.98e-07!9;CL:0002632!8.98e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.35e-10;4!CL:0000731;1.35e-10;4!CL:0000048;3.48e-09;58!CL:0000134;3.87e-09;55!CL:0000723;9.64e-09;61!CL:0002621;2.09e-08;3!CL:0000359;4.09e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.49e-11,4;CL:0000731,5.49e-11,4;CL:0000359,6.86e-09,32;CL:0002621,2.24e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.61e-12!14;DOID:120!1.86e-09!27;DOID:193!2.54e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.69e-21;14!DOID:120;5.24e-14;27!DOID:193;8.15e-13;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.10e-21,14;DOID:120,4.65e-14,27;DOID:193,7.31e-13,29 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.04e-14!143;UBERON:0000914!1.21e-14!83;UBERON:0002329!1.21e-14!83;UBERON:0003077!1.21e-14!83;UBERON:0003059!1.21e-14!83;UBERON:0007282!1.21e-14!83;UBERON:0009618!1.21e-14!83;UBERON:0007285!1.21e-14!83;UBERON:0000486!2.76e-14!82;UBERON:0003914!7.52e-13!118;UBERON:0002100!1.26e-12!216;UBERON:0000475!4.90e-11!365;UBERON:0001637!6.58e-11!42;UBERON:0003509!6.58e-11!42;UBERON:0004572!6.58e-11!42;UBERON:0004290!7.00e-11!70;UBERON:0001134!1.56e-10!61;UBERON:0002036!1.56e-10!61;UBERON:0003082!1.56e-10!61;UBERON:0004872!1.64e-10!84;UBERON:0002385!1.91e-10!63;UBERON:0001015!1.91e-10!63;UBERON:0000383!1.91e-10!63;UBERON:0002049!3.79e-10!79;UBERON:0007798!3.79e-10!79;UBERON:0003102!4.11e-10!95;UBERON:0001981!4.56e-10!60;UBERON:0007500!4.56e-10!60;UBERON:0004537!4.56e-10!60;UBERON:0006965!4.56e-10!60;UBERON:0000490!1.73e-09!138;UBERON:0004535!1.20e-08!110;UBERON:0000055!1.63e-08!69;UBERON:0004573!2.04e-08!33;UBERON:0004571!2.04e-08!33;UBERON:0003104!5.15e-08!238;UBERON:0009142!5.15e-08!238;UBERON:0001009!5.24e-08!113;UBERON:0002199!6.56e-08!45;UBERON:0002416!6.56e-08!45;UBERON:0000119!1.27e-07!312;UBERON:0000483!1.96e-07!309;UBERON:0000467!9.10e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.26e-09;12!UBERON:0000992;1.68e-09;13!UBERON:0002118;3.67e-09;5!UBERON:0000365;1.79e-08;5!UBERON:0001949;2.09e-08;3!UBERON:0005910;4.71e-07;6!UBERON:0002119;9.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.68e-09,13;UBERON:0002118,3.30e-09,5;UBERON:0000486,4.57e-09,83;UBERON:0000365,8.85e-09,5;UBERON:0001637,9.38e-09,42;UBERON:0003509,9.38e-09,42;UBERON:0004572,9.38e-09,42;UBERON:0001949,2.24e-08,3;UBERON:0002199,1.37e-07,46;UBERON:0002416,1.37e-07,46;UBERON:0005910,2.64e-07,6;UBERON:0004573,2.93e-07,33;UBERON:0004571,2.93e-07,33;UBERON:0002119,9.97e-07,4 | |||
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| |||
|short_description=p1@ENST00000527997 | |||
}} |
Revision as of 16:13, 10 September 2013
Short description: | p1@ENST00000527997 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000527997_5end |
Coexpression cluster: | C1614_Fibroblast_Small_Bronchial_Mallassezderived_Tracheal_Sebocyte_mesothelioma |
Association with transcript: | -13bp_to_ENST00000527997_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.49e-11 | 4 |
urothelial cell | 5.49e-11 | 4 |
vascular associated smooth muscle cell | 6.86e-09 | 32 |
gingival epithelial cell | 2.24e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.68e-09 | 13 |
right ovary | 3.30e-09 | 5 |
multilaminar epithelium | 4.57e-09 | 83 |
urothelium | 8.85e-09 | 5 |
artery | 9.38e-09 | 42 |
arterial blood vessel | 9.38e-09 | 42 |
arterial system | 9.38e-09 | 42 |
gingival epithelium | 2.24e-08 | 3 |
integument | 1.37e-07 | 46 |
integumental system | 1.37e-07 | 46 |
transitional epithelium | 2.64e-07 | 6 |
systemic artery | 2.93e-07 | 33 |
systemic arterial system | 2.93e-07 | 33 |
left ovary | 9.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.10e-21 | 14 |
female reproductive organ cancer | 4.65e-14 | 27 |
reproductive organ cancer | 7.31e-13 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.