FFCP PHASE1:Hg19::chr11:16403910..16403933,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55553|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16421|TSSclassifier=S|UniProt=E9PN02|association_with_transcript=10bp_to_ENST00000526673_5end|coexpression_cluster_id=C33|description=CAGE_peak_12_at_SOX6_5end|id=chr11:16403910..16403933,-|ontology_enrichment_celltype=CL:0000764!4.14e-13!2;CL:0000765!4.14e-13!2;CL:0000050!4.14e-13!2;CL:0000038!4.14e-13!2;CL:0000558!4.14e-13!2;CL:0000547!4.14e-13!2;CL:0000549!4.14e-13!2;CL:0000550!4.14e-13!2;CL:0000552!4.14e-13!2|ontology_enrichment_celltype_v019=CL:0000764;8.70e-23;2!CL:0000558;8.70e-23;2|ontology_enrichment_celltype_v019_2=CL:0000764,8.70e-23,2;CL:0000765,8.70e-23,2;CL:0000050,8.70e-23,2;CL:0000038,8.70e-23,2;CL:0000558,8.70e-23,2;CL:0000547,8.70e-23,2;CL:0000549,8.70e-23,2;CL:0000550,8.70e-23,2;CL:0000552,8.70e-23,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!1.17e-24!8;DOID:8692!5.27e-08!31|ontology_enrichment_disease_v019=DOID:1036;9.54e-21;8!DOID:8692;3.30e-08;31|ontology_enrichment_disease_v019_2=DOID:1036,1.24e-20,8;DOID:8692,3.52e-08,31|ontology_enrichment_uberon=UBERON:0000178!4.20e-30!15;UBERON:0000179!4.20e-30!15;UBERON:0000463!4.20e-30!15;UBERON:0007023!1.43e-10!115;UBERON:0002106!2.70e-08!3;UBERON:0004854!2.70e-08!3;UBERON:0009034!2.70e-08!3;UBERON:0002095!2.70e-08!3;UBERON:0004782!2.70e-08!3;UBERON:0003281!2.70e-08!3;UBERON:0009664!2.70e-08!3;UBERON:0002296!2.70e-08!3;UBERON:0005602!2.70e-08!3;UBERON:0001179!2.70e-08!3;UBERON:0006293!2.70e-08!3;UBERON:0004177!1.52e-07!7;UBERON:0007029!6.38e-07!1|ontology_enrichment_uberon_v019=UBERON:0000178;3.18e-44;15!UBERON:0000179;3.18e-44;15!UBERON:0000463;3.18e-44;15!UBERON:0002390;5.06e-24;32!UBERON:0002193;6.14e-12;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.77e-44,15;UBERON:0000179,2.77e-44,15;UBERON:0000463,2.77e-44,15;UBERON:0007023,1.07e-09,114;UBERON:0002390,1.68e-07,98;UBERON:0003061,1.68e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8519753291869,35.8166567904114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,0.764637207142375,7.97506062043828,3.57347663186684,2.87953591160336,6.48473311192717,4.32025149790492,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,1.17637520590644,2.3495022176618,1.3282761290693,2.06617552674492,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,5.30027555648885,0,0,0,0,0,2.67247318669432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,2.44939974299593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p12@SOX6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |||
|TSSclassifier=S | |||
|UniProt=E9PN02 | |||
|association_with_transcript=10bp_to_ENST00000526673_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_12_at_SOX6_5end | |||
|id=chr11:16403910..16403933,- | |||
|ontology_enrichment_celltype=CL:0000764!4.14e-13!2;CL:0000765!4.14e-13!2;CL:0000050!4.14e-13!2;CL:0000038!4.14e-13!2;CL:0000558!4.14e-13!2;CL:0000547!4.14e-13!2;CL:0000549!4.14e-13!2;CL:0000550!4.14e-13!2;CL:0000552!4.14e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;8.70e-23;2!CL:0000558;8.70e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.70e-23,2;CL:0000765,8.70e-23,2;CL:0000050,8.70e-23,2;CL:0000038,8.70e-23,2;CL:0000558,8.70e-23,2;CL:0000547,8.70e-23,2;CL:0000549,8.70e-23,2;CL:0000550,8.70e-23,2;CL:0000552,8.70e-23,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.17e-24!8;DOID:8692!5.27e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;9.54e-21;8!DOID:8692;3.30e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.24e-20,8;DOID:8692,3.52e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.20e-30!15;UBERON:0000179!4.20e-30!15;UBERON:0000463!4.20e-30!15;UBERON:0007023!1.43e-10!115;UBERON:0002106!2.70e-08!3;UBERON:0004854!2.70e-08!3;UBERON:0009034!2.70e-08!3;UBERON:0002095!2.70e-08!3;UBERON:0004782!2.70e-08!3;UBERON:0003281!2.70e-08!3;UBERON:0009664!2.70e-08!3;UBERON:0002296!2.70e-08!3;UBERON:0005602!2.70e-08!3;UBERON:0001179!2.70e-08!3;UBERON:0006293!2.70e-08!3;UBERON:0004177!1.52e-07!7;UBERON:0007029!6.38e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.18e-44;15!UBERON:0000179;3.18e-44;15!UBERON:0000463;3.18e-44;15!UBERON:0002390;5.06e-24;32!UBERON:0002193;6.14e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.77e-44,15;UBERON:0000179,2.77e-44,15;UBERON:0000463,2.77e-44,15;UBERON:0007023,1.07e-09,114;UBERON:0002390,1.68e-07,98;UBERON:0003061,1.68e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8519753291869,35.8166567904114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,0.764637207142375,7.97506062043828,3.57347663186684,2.87953591160336,6.48473311192717,4.32025149790492,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,1.17637520590644,2.3495022176618,1.3282761290693,2.06617552674492,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,5.30027555648885,0,0,0,0,0,2.67247318669432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,2.44939974299593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p12@SOX6 | |||
}} |
Revision as of 16:53, 10 September 2013
Short description: | p12@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SOX6_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 10bp_to_ENST00000526673_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PN02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.70e-23 | 2 |
erythroblast | 8.70e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 8.70e-23 | 2 |
erythroid progenitor cell | 8.70e-23 | 2 |
reticulocyte | 8.70e-23 | 2 |
proerythroblast | 8.70e-23 | 2 |
basophilic erythroblast | 8.70e-23 | 2 |
polychromatophilic erythroblast | 8.70e-23 | 2 |
orthochromatic erythroblast | 8.70e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.77e-44 | 15 |
haemolymphatic fluid | 2.77e-44 | 15 |
organism substance | 2.77e-44 | 15 |
adult organism | 1.07e-09 | 114 |
hematopoietic system | 1.68e-07 | 98 |
blood island | 1.68e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.24e-20 | 8 |
myeloid leukemia | 3.52e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.