FFCP PHASE1:Hg19::chr11:826136..826180,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28703|TSSclassifier=W|UniProt=E9PRE5,E9PK04|association_with_transcript=0bp_to_ENST00000528315,ENST00000533803,ENST00000534191,uc010qwt.1_5end|coexpression_cluster_id=C744|description=CAGE_peak_2_at_EFCAB4A_5end|id=chr11:826136..826180,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006595;1.11e-09;86|ontology_enrichment_disease=DOID:299!3.45e-13!25;DOID:5093!7.83e-10!4;DOID:1612!7.83e-10!4|ontology_enrichment_disease_v019=DOID:5093;1.17e-16;4!DOID:1612;1.17e-16;4!DOID:299;5.11e-11;25|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-16,4;DOID:1612,1.40e-16,4;DOID:299,5.78e-11,25|ontology_enrichment_uberon=UBERON:0004921!2.22e-15!129;UBERON:0004185!2.22e-15!129;UBERON:0007023!1.95e-13!115;UBERON:0004119!4.70e-13!169;UBERON:0000925!4.70e-13!169;UBERON:0006595!4.70e-13!169;UBERON:0001007!9.93e-13!155;UBERON:0001555!9.93e-13!155;UBERON:0007026!9.93e-13!155;UBERON:0000077!1.30e-10!130;UBERON:0005409!1.38e-09!35;UBERON:0000160!2.63e-08!27;UBERON:0001041!6.95e-08!98;UBERON:0000310!1.03e-07!10;UBERON:0006947!3.69e-07!3;UBERON:0004054!3.69e-07!3;UBERON:0000466!3.82e-07!126;UBERON:0001443!6.22e-07!11|ontology_enrichment_uberon_v019=UBERON:0004921;3.14e-10;33!UBERON:0000310;3.63e-10;10!UBERON:0001829;7.85e-10;2!UBERON:0003127;1.33e-09;2!UBERON:0000341;2.53e-09;2!UBERON:0001443;3.28e-09;11!UBERON:0005409;2.35e-07;22!UBERON:0001041;3.03e-07;14!UBERON:0001044;3.83e-07;6!UBERON:0003293;3.83e-07;6!UBERON:0003294;3.83e-07;6!UBERON:0010047;3.83e-07;6!UBERON:0003408;3.83e-07;6!UBERON:0000167;3.83e-07;6!UBERON:0001155;5.29e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.76e-13,118;UBERON:0007023,2.86e-13,114;UBERON:0001007,5.25e-11,145;UBERON:0001555,5.25e-11,145;UBERON:0007026,5.25e-11,145;UBERON:0000310,3.97e-10,10;UBERON:0001829,7.85e-10,2;UBERON:0003127,1.36e-09,2;UBERON:0004119,1.90e-09,160;UBERON:0000925,1.90e-09,160;UBERON:0006595,1.90e-09,160;UBERON:0000341,2.33e-09,2;UBERON:0001443,3.54e-09,11;UBERON:0000915,1.21e-08,52;UBERON:0001041,3.23e-08,87;UBERON:0001004,1.08e-07,74;UBERON:0000161,1.20e-07,36;UBERON:0001044,3.83e-07,6;UBERON:0003293,3.83e-07,6;UBERON:0003294,3.83e-07,6;UBERON:0010047,3.83e-07,6;UBERON:0000167,3.83e-07,6;UBERON:0001155,5.51e-07,9|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.576479813667846,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73705945469591,0.293016358543788,0,0,0,0,0.890894042497916,0,0,0,0,0,0,13.1503672245706,1.65770349318689,0,0,0,0,0,7.51888933637558,0,3.94573622547734,0,0,0,0,0,22.9176429755005,281.271359987765,23.9249859893482,0,2.54253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,15.9241908972561,1.23840590304675,3.05515072466813,0,0,0,0,0,0,0,1.56531695145672,0,2.76209081994573,8.46935012340647,0,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,6.55344148263544,0,0,0,0,0.721429382263803,2.77488893161158,0,5.61952626901013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38651802095763,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9337051562167,3.52398461473392,3.45849471219265,7.45630299624952,0,0,0,0,0,0.5013797880454,0,0,12.093165411268,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.1262233816704,0,0,0.147856086217045,0,0,0,0,0,203.951889270872,10.4204347461752,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,15.6986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,274.485054927337,0,0,25.8266100616467,0.22910686854405,0,0,2.46081949955143,0.098150233615243,2.68219434960993,0,0,0,10.6856418473011,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,2.92134555298607,214.685304633325,0,0,0,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,17.9116544796824,6.90386851244847,0,0,0,0,0,5.87835219321796,5.81796611844978,9.09252715696932,21.946994850159,17.6309988969387,0,0,0,0,0,0.122241444182866,0,1.99727032255654,0.603821380773079,0|short_description=p2@EFCAB4A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=283229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |||
|TSSclassifier=W | |||
|UniProt=E9PRE5,E9PK04 | |||
|association_with_transcript=0bp_to_ENST00000528315,ENST00000533803,ENST00000534191,uc010qwt.1_5end | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_2_at_EFCAB4A_5end | |||
|id=chr11:826136..826180,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.11e-09;86 | |||
|ontology_enrichment_disease=DOID:299!3.45e-13!25;DOID:5093!7.83e-10!4;DOID:1612!7.83e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.17e-16;4!DOID:1612;1.17e-16;4!DOID:299;5.11e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-16,4;DOID:1612,1.40e-16,4;DOID:299,5.78e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.22e-15!129;UBERON:0004185!2.22e-15!129;UBERON:0007023!1.95e-13!115;UBERON:0004119!4.70e-13!169;UBERON:0000925!4.70e-13!169;UBERON:0006595!4.70e-13!169;UBERON:0001007!9.93e-13!155;UBERON:0001555!9.93e-13!155;UBERON:0007026!9.93e-13!155;UBERON:0000077!1.30e-10!130;UBERON:0005409!1.38e-09!35;UBERON:0000160!2.63e-08!27;UBERON:0001041!6.95e-08!98;UBERON:0000310!1.03e-07!10;UBERON:0006947!3.69e-07!3;UBERON:0004054!3.69e-07!3;UBERON:0000466!3.82e-07!126;UBERON:0001443!6.22e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.14e-10;33!UBERON:0000310;3.63e-10;10!UBERON:0001829;7.85e-10;2!UBERON:0003127;1.33e-09;2!UBERON:0000341;2.53e-09;2!UBERON:0001443;3.28e-09;11!UBERON:0005409;2.35e-07;22!UBERON:0001041;3.03e-07;14!UBERON:0001044;3.83e-07;6!UBERON:0003293;3.83e-07;6!UBERON:0003294;3.83e-07;6!UBERON:0010047;3.83e-07;6!UBERON:0003408;3.83e-07;6!UBERON:0000167;3.83e-07;6!UBERON:0001155;5.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.76e-13,118;UBERON:0007023,2.86e-13,114;UBERON:0001007,5.25e-11,145;UBERON:0001555,5.25e-11,145;UBERON:0007026,5.25e-11,145;UBERON:0000310,3.97e-10,10;UBERON:0001829,7.85e-10,2;UBERON:0003127,1.36e-09,2;UBERON:0004119,1.90e-09,160;UBERON:0000925,1.90e-09,160;UBERON:0006595,1.90e-09,160;UBERON:0000341,2.33e-09,2;UBERON:0001443,3.54e-09,11;UBERON:0000915,1.21e-08,52;UBERON:0001041,3.23e-08,87;UBERON:0001004,1.08e-07,74;UBERON:0000161,1.20e-07,36;UBERON:0001044,3.83e-07,6;UBERON:0003293,3.83e-07,6;UBERON:0003294,3.83e-07,6;UBERON:0010047,3.83e-07,6;UBERON:0000167,3.83e-07,6;UBERON:0001155,5.51e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.576479813667846,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73705945469591,0.293016358543788,0,0,0,0,0.890894042497916,0,0,0,0,0,0,13.1503672245706,1.65770349318689,0,0,0,0,0,7.51888933637558,0,3.94573622547734,0,0,0,0,0,22.9176429755005,281.271359987765,23.9249859893482,0,2.54253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,15.9241908972561,1.23840590304675,3.05515072466813,0,0,0,0,0,0,0,1.56531695145672,0,2.76209081994573,8.46935012340647,0,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,6.55344148263544,0,0,0,0,0.721429382263803,2.77488893161158,0,5.61952626901013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38651802095763,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9337051562167,3.52398461473392,3.45849471219265,7.45630299624952,0,0,0,0,0,0.5013797880454,0,0,12.093165411268,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.1262233816704,0,0,0.147856086217045,0,0,0,0,0,203.951889270872,10.4204347461752,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,15.6986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,274.485054927337,0,0,25.8266100616467,0.22910686854405,0,0,2.46081949955143,0.098150233615243,2.68219434960993,0,0,0,10.6856418473011,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,2.92134555298607,214.685304633325,0,0,0,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,17.9116544796824,6.90386851244847,0,0,0,0,0,5.87835219321796,5.81796611844978,9.09252715696932,21.946994850159,17.6309988969387,0,0,0,0,0,0.122241444182866,0,1.99727032255654,0.603821380773079,0 | |||
|short_description=p2@EFCAB4A | |||
}} |
Revision as of 19:55, 10 September 2013
Short description: | p2@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EFCAB4A_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | 0bp_to_ENST00000528315, ENST00000533803, ENST00000534191, uc010qwt.1_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | E9PRE5E9PK04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.76e-13 | 118 |
adult organism | 2.86e-13 | 114 |
digestive system | 5.25e-11 | 145 |
digestive tract | 5.25e-11 | 145 |
primitive gut | 5.25e-11 | 145 |
breast | 3.97e-10 | 10 |
major salivary gland | 7.85e-10 | 2 |
open tracheal system trachea | 1.36e-09 | 2 |
endoderm-derived structure | 1.90e-09 | 160 |
endoderm | 1.90e-09 | 160 |
presumptive endoderm | 1.90e-09 | 160 |
throat | 2.33e-09 | 2 |
chest | 3.54e-09 | 11 |
thoracic segment of trunk | 1.21e-08 | 52 |
foregut | 3.23e-08 | 87 |
respiratory system | 1.08e-07 | 74 |
orifice | 1.20e-07 | 36 |
saliva-secreting gland | 3.83e-07 | 6 |
gland of oral region | 3.83e-07 | 6 |
gland of foregut | 3.83e-07 | 6 |
oral gland | 3.83e-07 | 6 |
oral cavity | 3.83e-07 | 6 |
colon | 5.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.40e-16 | 4 |
breast cancer | 1.40e-16 | 4 |
adenocarcinoma | 5.78e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.