FFCP PHASE1:Hg19::chr12:54393743..54393803,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000505700_5end|description=CAGE_peak_1_at_ENST00000505700_5end|id=chr12:54393743..54393803,-|ontology_enrichment_celltype=CL:0000136!1.82e-09!15;CL:0002334!7.29e-07!12|ontology_enrichment_celltype_v019=CL:0000136;2.21e-11;13!CL:1000507;9.35e-08;10!CL:1000494;9.35e-08;10!CL:0002334;7.22e-07;12|ontology_enrichment_celltype_v019_2=CL:0000136,1.84e-13,15;CL:1000507,1.15e-07,10;CL:1000494,1.15e-07,10;CL:0002570,5.31e-07,8;CL:0002334,6.01e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.64e-08!239;DOID:162!3.13e-08!235;DOID:0050687!1.09e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!6.99e-10!14;UBERON:0002113!1.53e-08!27;UBERON:0003918!1.53e-08!27;UBERON:0005095!1.53e-08!27;UBERON:0007687!1.53e-08!27;UBERON:0000489!1.96e-08!32;UBERON:0000310!9.72e-07!10|ontology_enrichment_uberon_v019=UBERON:0001013;6.14e-13;14!UBERON:0002113;8.75e-09;24!UBERON:0011143;8.75e-09;24!UBERON:0001134;4.12e-08;16!UBERON:0002036;4.12e-08;16!UBERON:0000489;7.69e-08;29!UBERON:0004211;9.35e-08;10!UBERON:0009773;9.35e-08;10!UBERON:0001231;9.35e-08;10!UBERON:0004810;9.35e-08;10!UBERON:0002072;3.74e-07;5!UBERON:0011135;3.94e-07;5!UBERON:0002216;3.94e-07;5!UBERON:0011134;3.94e-07;5!UBERON:0002209;3.94e-07;5!UBERON:0002213;3.94e-07;5!UBERON:0007844;3.94e-07;5!UBERON:0011138;3.94e-07;5!UBERON:0001130;3.94e-07;5!UBERON:0001066;3.94e-07;5!UBERON:0001468;3.94e-07;5!UBERON:0000310;6.80e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0001013,9.78e-14,14;UBERON:0002113,4.67e-10,26;UBERON:0003918,4.67e-10,26;UBERON:0011143,4.67e-10,26;UBERON:0005095,4.67e-10,26;UBERON:0007687,4.67e-10,26;UBERON:0000489,5.11e-09,31;UBERON:0004810,1.15e-07,10;UBERON:0002072,1.92e-07,5;UBERON:0000310,2.17e-07,10;UBERON:0011135,2.73e-07,5;UBERON:0002216,2.73e-07,5;UBERON:0011134,2.73e-07,5;UBERON:0002209,2.73e-07,5;UBERON:0002213,2.73e-07,5;UBERON:0005856,2.73e-07,5;UBERON:0005866,2.73e-07,5;UBERON:0005863,2.73e-07,5;UBERON:0007844,2.73e-07,5;UBERON:0011138,2.73e-07,5;UBERON:0001130,2.73e-07,5;UBERON:0001066,2.73e-07,5;UBERON:0001468,2.73e-07,5|phase1_expression=1.63510541343501,1.92690471501885,0.845726424575827,0,3.12872766099101,1.74467704820074,12.6649939084155,1.89515962028049,5.74608382039645,0,0.697801167972428,0,0,2.72285976512103,2.98257638155124,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,3.0417768981773,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34503812496621,1.76151747965647,0.971237666208789,0.98315564691574,0,0,0,0,0,4.55080680969013,8.62341770179486,0,0,0,0,0,0,0,0,2.13557388818567,0.423863802319124,0.300091096084402,0.515262646192195,0.772921620136887,2.60563598864226,0.843881661206331,1.26668106709558,0.757301322732344,2.57739716198438,0,0,0.503760491138201,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,7.42988684851167,4.33127689001751,0.473227200159376,0.168584690078102,0.723033089650446,0.441175890929576,0.871517776369625,0.237270619111097,0.404493924480493,0.392442930250692,1.53898862778556,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.548751427043128,0,0.402115889646523,0,0,0,0,0,0,0.144366447761074,0,0,4.74122638775565,0.858486162094873,0,0,0,0,0,0,0.53735113621709,0.581267877027924,1.53353071666084,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0.571481048629521,2.67391897890794,1.17217447210047,1.71072446022705,0.514137463516618,0.300343057843917,1.42913216315289,0,0,0,1.93907573636667,35.7656445851882,1.690605505112,0.531876233169741,2.08014873822732,1.80045161983499,1.41849132023278,1.3321108950805,0,3.7983512377401,2.46972101034231,0.65147236858747,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,1.73737568001095,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,5.27573414392302,8.00272833695483,1.35632511849868,0,0,0,0,0.300946099727719,2.27407504055985,5.17365356462525,0,0.184369168541703,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0.604780586659361,1.48864684691266,0.460385919864187,1.96462066103151,2.30650468660262,2.04682899626681,0.482561763430822,2.96836132889982,2.46735510084249,2.66342587969691,1.06765302817952,0.519254429183621,1.39452454151951,0,0,0.184161977871793,0,0,0,5.41439535488894,1.23224539367064,2.35304930753057,2.92278449306521,2.00548094896464,1.13733384070897,0,0,0,2.70946437543853,3.01013864312912,0.764628819135115,0.831076008928724,2.23874754722178,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505700_5end | |||
|description=CAGE_peak_1_at_ENST00000505700_5end | |||
|id=chr12:54393743..54393803,- | |||
|ontology_enrichment_celltype=CL:0000136!1.82e-09!15;CL:0002334!7.29e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.21e-11;13!CL:1000507;9.35e-08;10!CL:1000494;9.35e-08;10!CL:0002334;7.22e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.84e-13,15;CL:1000507,1.15e-07,10;CL:1000494,1.15e-07,10;CL:0002570,5.31e-07,8;CL:0002334,6.01e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.64e-08!239;DOID:162!3.13e-08!235;DOID:0050687!1.09e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!6.99e-10!14;UBERON:0002113!1.53e-08!27;UBERON:0003918!1.53e-08!27;UBERON:0005095!1.53e-08!27;UBERON:0007687!1.53e-08!27;UBERON:0000489!1.96e-08!32;UBERON:0000310!9.72e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.14e-13;14!UBERON:0002113;8.75e-09;24!UBERON:0011143;8.75e-09;24!UBERON:0001134;4.12e-08;16!UBERON:0002036;4.12e-08;16!UBERON:0000489;7.69e-08;29!UBERON:0004211;9.35e-08;10!UBERON:0009773;9.35e-08;10!UBERON:0001231;9.35e-08;10!UBERON:0004810;9.35e-08;10!UBERON:0002072;3.74e-07;5!UBERON:0011135;3.94e-07;5!UBERON:0002216;3.94e-07;5!UBERON:0011134;3.94e-07;5!UBERON:0002209;3.94e-07;5!UBERON:0002213;3.94e-07;5!UBERON:0007844;3.94e-07;5!UBERON:0011138;3.94e-07;5!UBERON:0001130;3.94e-07;5!UBERON:0001066;3.94e-07;5!UBERON:0001468;3.94e-07;5!UBERON:0000310;6.80e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,9.78e-14,14;UBERON:0002113,4.67e-10,26;UBERON:0003918,4.67e-10,26;UBERON:0011143,4.67e-10,26;UBERON:0005095,4.67e-10,26;UBERON:0007687,4.67e-10,26;UBERON:0000489,5.11e-09,31;UBERON:0004810,1.15e-07,10;UBERON:0002072,1.92e-07,5;UBERON:0000310,2.17e-07,10;UBERON:0011135,2.73e-07,5;UBERON:0002216,2.73e-07,5;UBERON:0011134,2.73e-07,5;UBERON:0002209,2.73e-07,5;UBERON:0002213,2.73e-07,5;UBERON:0005856,2.73e-07,5;UBERON:0005866,2.73e-07,5;UBERON:0005863,2.73e-07,5;UBERON:0007844,2.73e-07,5;UBERON:0011138,2.73e-07,5;UBERON:0001130,2.73e-07,5;UBERON:0001066,2.73e-07,5;UBERON:0001468,2.73e-07,5 | |||
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| |||
|short_description=p1@ENST00000505700 | |||
}} |
Revision as of 23:20, 10 September 2013
Short description: | p1@ENST00000505700 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000505700_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505700_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.84e-13 | 15 |
kidney tubule cell | 1.15e-07 | 10 |
nephron tubule epithelial cell | 1.15e-07 | 10 |
mesenchymal stem cell of adipose | 5.31e-07 | 8 |
preadipocyte | 6.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 9.78e-14 | 14 |
kidney | 4.67e-10 | 26 |
kidney mesenchyme | 4.67e-10 | 26 |
upper urinary tract | 4.67e-10 | 26 |
kidney rudiment | 4.67e-10 | 26 |
kidney field | 4.67e-10 | 26 |
cavitated compound organ | 5.11e-09 | 31 |
nephron tubule epithelium | 1.15e-07 | 10 |
hypodermis | 1.92e-07 | 5 |
breast | 2.17e-07 | 10 |
intervertebral cartilage | 2.73e-07 | 5 |
symphysis | 2.73e-07 | 5 |
nonsynovial joint | 2.73e-07 | 5 |
fibrous joint | 2.73e-07 | 5 |
cartilaginous joint | 2.73e-07 | 5 |
developing mesenchymal condensation | 2.73e-07 | 5 |
pre-cartilage condensation | 2.73e-07 | 5 |
cartilaginous condensation | 2.73e-07 | 5 |
cartilage element | 2.73e-07 | 5 |
post-cranial axial skeletal system | 2.73e-07 | 5 |
vertebral column | 2.73e-07 | 5 |
intervertebral disk | 2.73e-07 | 5 |
intervertebral joint | 2.73e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.